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FFCP PHASE1:Mm9::chr17:47641992..47642015,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=12445|HGNC=|MCL_coexpression_id=4|UniProt=P30282,Q3TSW4,Q3TWY0|association_with_transcript=0bp_to_ENSMUST00000171031,NM_001081635,NM_001081636,uc008cvk.1,uc008cvl.1,uc008cvm.1_5end|description=CAGE_peak_8_at_Ccnd3_5end|id=chr17:47641992..47642015,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002031,8.58e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!1.01e-10!29;UBERON:0003081!6.72e-10!88;UBERON:0003408!4.09e-09!24;UBERON:0000926!4.39e-09!193;UBERON:0004120!4.39e-09!193;UBERON:0006603!4.39e-09!193;UBERON:0002370!1.15e-08!23;UBERON:0000974!1.15e-08!23;UBERON:0004807!1.15e-08!23;UBERON:0005058!1.15e-08!23;UBERON:0003351!1.15e-08!23;UBERON:0009113!1.15e-08!23;UBERON:0003295!1.15e-08!23;UBERON:0009722!1.15e-08!23;UBERON:0005562!1.15e-08!23;UBERON:0007690!1.15e-08!23;UBERON:0006562!1.49e-08!24;UBERON:0001557!1.49e-08!24;UBERON:0001042!1.49e-08!24;UBERON:0008814!1.49e-08!24;UBERON:0009145!1.49e-08!24;UBERON:0002390!1.41e-07!45;UBERON:0003061!1.41e-07!45;UBERON:0001004!1.70e-07!42;UBERON:0000065!4.14e-07!41;UBERON:0002193!5.41e-07!48|ontology_enrichment_uberon_v019_2=UBERON:0004177,7.17e-13,29;UBERON:0005057,7.17e-13,29;UBERON:0000077,5.99e-12,35;UBERON:0003081,2.58e-11,87;UBERON:0003408,5.80e-11,24;UBERON:0000926,1.10e-10,120;UBERON:0004120,1.10e-10,120;UBERON:0006603,1.10e-10,120;UBERON:0002370,1.99e-10,23;UBERON:0000974,1.99e-10,23;UBERON:0004807,1.99e-10,23;UBERON:0005058,1.99e-10,23;UBERON:0003351,1.99e-10,23;UBERON:0009113,1.99e-10,23;UBERON:0003295,1.99e-10,23;UBERON:0009722,1.99e-10,23;UBERON:0005562,1.99e-10,23;UBERON:0007690,1.99e-10,23;UBERON:0006562,2.77e-10,24;UBERON:0001557,2.77e-10,24;UBERON:0001042,2.77e-10,24;UBERON:0008814,2.77e-10,24;UBERON:0009145,2.77e-10,24;UBERON:0002390,5.44e-10,45;UBERON:0003061,5.44e-10,45;UBERON:0002193,1.66e-09,48;UBERON:0002405,1.66e-09,48;UBERON:0001004,3.31e-08,42;UBERON:0000072,4.21e-08,27;UBERON:0000065,9.28e-08,41;UBERON:0000153,9.44e-07,43|phase1_expression=0.640595388419176,0,0,0,0.500895729946347,0.33575854382378,0.700837921786577,18.2063886052623,0.84473233291,1.40438715793196,1.02730780935303,1.99430397488341,16.0928686135333,15.7356724354195,1.99865857089398,4.04950534779652,2.79824751251259,10.2525203741427,12.7516423253337,10.6097412949508,2.38121212422995,2.28369187762036,2.08959831311148,0.159992422793407,0.22940928106717,0,0,0,0,0.252030129759931,0.221730510655305,1.90509202037889,1.23012957516914,15.8481681015439,1.1554064790051,0.498703936075477,1.22501613757421,6.27797446105362,6.2506827561904,2.09409497589519,7.05877785637217,3.41522742479223,0.971020706062307,0.377690453926732,0.101376931219515,0.917733760808408,1.56478268869608,0.436050312760893,0.659058548203415,0.388859798148567,1.25987779462826,0,4.86569557567435,10.8804321301702,11.4271891708438,1.28629718017973,1.14613375975503,2.06268836910977,0.202316460859598,0,0,0.677689064138264,0.889294796111139,0.899899717281399,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0.220868540951614,0,0,0,0,0.510749352340751,0,0.263772575460388,0,1.04182674111352,0,0,0.45839474333043,0.294628585473668,0.142371680799103,0,0.151452386666368,0.302286240427142,1.44932244350839,0,0.679971333707751,0,0,0,0.702222100658759,0.170430322578058,0,0,0.563373679106722,0,0,7.11066703153331,0,0.253359865475099,0.505524445014783,1.37020655662872,6.21450920753212,1.63286352971307,0.693941307064543,0.304465478312141,0.691846491768175,1.80867168663147,1.17588707135705,1.50799909595611,1.23597483867187,1.44599356919912,0,0.485300549842228,2.20841518460394,1.93950101254089,0,0.878342391034642,0.41889341362691,0.510914110417183,2.27648736561249,1.19980546198682,1.65191295194984,0.449371918214468,0.457500602818626,0.125654352112864,0.173824320192276,1.02286182932132,0.41557608911912,0.486723789203273,0.712875546952214,2.23932547098167,1.76905930903572,0.841767423545896,0.650602214813519,0.459804208866946,0.720248519221397,0.452114453507145,0.612328492361951,0.640568601424249,0.374806898238915,0.517406741478031,1.72454394346274,1.89106080167819,2.81521798662318,1.53437012699302,3.05851974148158,2.78601733217733,1.64625709126355,0.995171334092466,0.702213187313235,1.02939162845886,0.284163499395593,1.44988040774851,0.703578179943289,0.720248245844059,2.84093682702252,1.37734962223183,2.46827380619805,1.16266972375204,1.60964040839772,3.26942958628075,1.31647879930784,0.656669856316381,0.891756905004413,1.60819986167866,1.09775057645525,1.47627060636409,0,0.102904612379284,0.660837565967596,0.264450566663544,1.49301775374664,2.55460339046482,0.644337306610467,0.80673409849337,1.55664630691409,0.570676878337677,0.949058123089023,0.658795818896044,0.502670417600539,0.397912944082302,0.19496408711912,0,0.216138049874694,0.597423819763102,1.51734320762465,1.02823661348756,2.25415471346161,0.610953983535943,0.969762435838129,1.75339549725796,1.39120381673366,1.18088118383682,1.255989822731,1.60416313098341,0.296452627087149,1.0010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|EntrezGene=12445
|HGNC=
|MCL_coexpression_id=4
|UniProt=P30282,Q3TSW4,Q3TWY0
|association_with_transcript=0bp_to_ENSMUST00000171031,NM_001081635,NM_001081636,uc008cvk.1,uc008cvl.1,uc008cvm.1_5end
|description=CAGE_peak_8_at_Ccnd3_5end
|id=chr17:47641992..47642015,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002031,8.58e-07,25
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!1.01e-10!29;UBERON:0003081!6.72e-10!88;UBERON:0003408!4.09e-09!24;UBERON:0000926!4.39e-09!193;UBERON:0004120!4.39e-09!193;UBERON:0006603!4.39e-09!193;UBERON:0002370!1.15e-08!23;UBERON:0000974!1.15e-08!23;UBERON:0004807!1.15e-08!23;UBERON:0005058!1.15e-08!23;UBERON:0003351!1.15e-08!23;UBERON:0009113!1.15e-08!23;UBERON:0003295!1.15e-08!23;UBERON:0009722!1.15e-08!23;UBERON:0005562!1.15e-08!23;UBERON:0007690!1.15e-08!23;UBERON:0006562!1.49e-08!24;UBERON:0001557!1.49e-08!24;UBERON:0001042!1.49e-08!24;UBERON:0008814!1.49e-08!24;UBERON:0009145!1.49e-08!24;UBERON:0002390!1.41e-07!45;UBERON:0003061!1.41e-07!45;UBERON:0001004!1.70e-07!42;UBERON:0000065!4.14e-07!41;UBERON:0002193!5.41e-07!48
|ontology_enrichment_uberon_v019_2=UBERON:0004177,7.17e-13,29;UBERON:0005057,7.17e-13,29;UBERON:0000077,5.99e-12,35;UBERON:0003081,2.58e-11,87;UBERON:0003408,5.80e-11,24;UBERON:0000926,1.10e-10,120;UBERON:0004120,1.10e-10,120;UBERON:0006603,1.10e-10,120;UBERON:0002370,1.99e-10,23;UBERON:0000974,1.99e-10,23;UBERON:0004807,1.99e-10,23;UBERON:0005058,1.99e-10,23;UBERON:0003351,1.99e-10,23;UBERON:0009113,1.99e-10,23;UBERON:0003295,1.99e-10,23;UBERON:0009722,1.99e-10,23;UBERON:0005562,1.99e-10,23;UBERON:0007690,1.99e-10,23;UBERON:0006562,2.77e-10,24;UBERON:0001557,2.77e-10,24;UBERON:0001042,2.77e-10,24;UBERON:0008814,2.77e-10,24;UBERON:0009145,2.77e-10,24;UBERON:0002390,5.44e-10,45;UBERON:0003061,5.44e-10,45;UBERON:0002193,1.66e-09,48;UBERON:0002405,1.66e-09,48;UBERON:0001004,3.31e-08,42;UBERON:0000072,4.21e-08,27;UBERON:0000065,9.28e-08,41;UBERON:0000153,9.44e-07,43
|phase1_expression=0.640595388419176,0,0,0,0.500895729946347,0.33575854382378,0.700837921786577,18.2063886052623,0.84473233291,1.40438715793196,1.02730780935303,1.99430397488341,16.0928686135333,15.7356724354195,1.99865857089398,4.04950534779652,2.79824751251259,10.2525203741427,12.7516423253337,10.6097412949508,2.38121212422995,2.28369187762036,2.08959831311148,0.159992422793407,0.22940928106717,0,0,0,0,0.252030129759931,0.221730510655305,1.90509202037889,1.23012957516914,15.8481681015439,1.1554064790051,0.498703936075477,1.22501613757421,6.27797446105362,6.2506827561904,2.09409497589519,7.05877785637217,3.41522742479223,0.971020706062307,0.377690453926732,0.101376931219515,0.917733760808408,1.56478268869608,0.436050312760893,0.659058548203415,0.388859798148567,1.25987779462826,0,4.86569557567435,10.8804321301702,11.4271891708438,1.28629718017973,1.14613375975503,2.06268836910977,0.202316460859598,0,0,0.677689064138264,0.889294796111139,0.899899717281399,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0.220868540951614,0,0,0,0,0.510749352340751,0,0.263772575460388,0,1.04182674111352,0,0,0.45839474333043,0.294628585473668,0.142371680799103,0,0.151452386666368,0.302286240427142,1.44932244350839,0,0.679971333707751,0,0,0,0.702222100658759,0.170430322578058,0,0,0.563373679106722,0,0,7.11066703153331,0,0.253359865475099,0.505524445014783,1.37020655662872,6.21450920753212,1.63286352971307,0.693941307064543,0.304465478312141,0.691846491768175,1.80867168663147,1.17588707135705,1.50799909595611,1.23597483867187,1.44599356919912,0,0.485300549842228,2.20841518460394,1.93950101254089,0,0.878342391034642,0.41889341362691,0.510914110417183,2.27648736561249,1.19980546198682,1.65191295194984,0.449371918214468,0.457500602818626,0.125654352112864,0.173824320192276,1.02286182932132,0.41557608911912,0.486723789203273,0.712875546952214,2.23932547098167,1.76905930903572,0.841767423545896,0.650602214813519,0.459804208866946,0.720248519221397,0.452114453507145,0.612328492361951,0.640568601424249,0.374806898238915,0.517406741478031,1.72454394346274,1.89106080167819,2.81521798662318,1.53437012699302,3.05851974148158,2.78601733217733,1.64625709126355,0.995171334092466,0.702213187313235,1.02939162845886,0.284163499395593,1.44988040774851,0.703578179943289,0.720248245844059,2.84093682702252,1.37734962223183,2.46827380619805,1.16266972375204,1.60964040839772,3.26942958628075,1.31647879930784,0.656669856316381,0.891756905004413,1.60819986167866,1.09775057645525,1.47627060636409,0,0.102904612379284,0.660837565967596,0.264450566663544,1.49301775374664,2.55460339046482,0.644337306610467,0.80673409849337,1.55664630691409,0.570676878337677,0.949058123089023,0.658795818896044,0.502670417600539,0.397912944082302,0.19496408711912,0,0.216138049874694,0.597423819763102,1.51734320762465,1.02823661348756,2.25415471346161,0.610953983535943,0.969762435838129,1.75339549725796,1.39120381673366,1.18088118383682,1.255989822731,1.60416313098341,0.296452627087149,1.00107063429656,0.982794975566015,0.674586337154561,0.608580364165509,0.482354319504834,0.763877555344259,1.43848068725405,4.53978634970099,0.823684239564244,0,0.372140947668503,0.312037673114561,0.505157755894224,0,0.482443521363367,1.29327233116623,1.13694847062291,0.488894929326078,0.339490171550376,0.938760993154008,2.1775813467436,1.90434912708811,2.73187107000918,0.945810864637146,0.8858587585951,1.59454768657487,2.13022309130459,2.07221978239075,2.02508682014116,0,0.54390568381871,4.91764273019036,6.62248191131358,0.481651769963376,0.703270119553219,0,0.252470927204373,3.47059041357882,1.17131623288992,1.72338718186239,2.38968797952552,2.45078541490634,3.39691836946599,3.23848561339915,2.33804686329049,1.97643888973262,0.321321316421807,0.567760340833074,1.42452482933804,0.977321756121456,1.81467135269789,1.32745138339963,1.69946445308487,1.51161778482376,1.13163047853539,0.590603785761546,1.84461088766356,0,3.63533729477506,0.712994756769443,1.26414703174326,0,3.09406629744561,3.06395645178409,0.720244376125241,0.905510786479282,0.857348140126369,1.24138163549592,1.96205699362278,0.987294123612726,1.2178597964584,0,0.63549621259146,1.98475558249466,1.81374878235628,2.9063596805263,0.72375509913787,0.835606408021955,0.820704498725306,0.874442509889552,0.370850604021019,2.05045056957423,3.50857675537478,2.22233432843654,1.31857919903284,3.00727300986255,3.88922894451088,3.90950388985867,3.35883485576779,3.04039942369732,0.954670618015114,1.10717597753397,0.609958401380546,0.432021363287205,0.836353184057875,0.87345025498471,0.539457385539283,1.48776220305605,0.785267825952089,0.518459893167171,3.10669656543463,0,1.04661582230785,1.15820943319968,0.583353565032143,1.03327858782185,1.520605129417,1.40828686374905,0.781226309063701,0.524296722128554,0.724752362478018,0.576060012515731,28.441000856536,2.22997736819181,2.67048488628551,7.66532855568991,18.0816962624156,28.4114337337209,29.3276896828724,33.0824540871053,38.1653180803998,36.7316808077099,47.8924379399992,41.6145150758743,50.4150050195326,63.2304040802288,1.13365191807606,0.443971906748129,0,0.167884616364078,1.15913756419314,1.50145980360946,1.64836461840539,1.92931541171159,1.50471631210609,0,0,0.572895513439397,0.171853182343688,0.685082519770642,0.755393897389701,0,0,0,0,0.415149390336707,0,1.87806966329548,1.70174701947806,0.419226325255965,0.367687016900028,0.666740183404846,1.03017528619447,0.64183841918363,0.252697211763798,2.02783439912192,0.565879024158229,1.12369808963859,0.640251524048693,1.09127391015665,0.476293691283074,1.0429589335037,1.54327376370964,0.824171801606613,0.441596760403192,1.02860775715625,0.887379030796687,1.43061713968393,1.30811774969096,0.846984423737976,1.09998990259179,1.28049581010941,0.526139422875686,0.950628796921032,1.68342681497322,1.18635018124174,0.689531376628944,0,1.23949472948773,0.964533054905707,0.249810577937946,1.63752125911786,1.71896843238639,0.956441660344217,0.441182838239031,0.463735671240843
|short_description=p8@Ccnd3
}}

Revision as of 14:42, 13 September 2013

Short description:p8@Ccnd3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_8_at_Ccnd3_5end
Coexpression cluster:MCL_coexpression_mm9:4
Association with transcript: 0bp_to_ENSMUST00000171031, NM_001081635, NM_001081636, uc008cvk.1, uc008cvl.1, uc008cvm.1_5end
EntrezGene:Ccnd3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p8@Ccnd3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E918.21
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.99
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E416.09
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E815.74
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.05
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A210.25
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A412.75
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A610.61
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.09
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G86.28
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H16.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G97.06
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H23.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.26
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.87
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I910.88
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A111.43
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.37
accessory axillary lymph node, adult.CNhs10475.1063-29H96.21
adrenal gland, adult.CNhs10508.49-24D71.63
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F51.81
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I31.51
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H11.45
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A62.21
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.28
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.65
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.24
epididymis, adult.CNhs10490.58-23B21.77
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.61
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E21.72
forelimb, embryo E12.CNhs10600.359-14H21.89
forelimb, embryo E13.CNhs10589.384-1E22.82
forelimb, embryo E14.CNhs10577.413-26A81.53
forelimb, embryo E15.CNhs11007.437-20E73.06
forelimb, embryo E17.CNhs10598.1517-43C42.79
forelimb, embryo E18.CNhs11008.1520-43B51.65
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E91.45
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D42.84
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C62.47
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G31.61
heart, neonate N00.CNhs11213.639-21E33.27
heart, neonate N03.CNhs11221.1349-25I21.32
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.89
heart, neonate N20.CNhs11127.821-26I61.61
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D21.48
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D52.55
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D31.56
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G71.75
kidney, neonate N10.CNhs11206.758-6D51.39
kidney, neonate N20.CNhs11113.832-19I11.18
kidney, neonate N25.CNhs11122.1353-25F31.26
kidney, neonate N30.CNhs11203.1385-42H11.60
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F81.00
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F44.54
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B11.29
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A62.18
lung, embryo E18.CNhs10583.1287-20I61.90
lung, neonate N00.CNhs11224.640-42C62.73
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E61.59
lung, neonate N20.CNhs11109.822-18A42.13
lung, neonate N25.CNhs11119.1359-25C72.07
lung, neonate N30.CNhs11133.1394-42H22.03
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B64.92
mammary gland, adult pregnant day19.CNhs10476.588-5H26.62
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.47
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.39
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.40
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.34
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H71.42
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G61.81
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D73.64
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G83.06
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.91
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F81.98
skin, adult.CNhs10492.30-1C31.81
skin, neonate N00.CNhs11124.650-25G42.91
skin, neonate N03.CNhs11215.662-22H30.72
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G22.05
spleen, embryo E16.CNhs11035.461-43C13.51
spleen, embryo E18.CNhs11011.1271-21F22.22
spleen, neonate N10.CNhs11116.752-24D11.32
spleen, neonate N20.CNhs11112.824-19H13.01
spleen, neonate N25.CNhs11099.1354-25G33.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.91
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.04
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A91.49
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C13.11
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.05
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G51.52
testis, neonate N00.CNhs11189.1300-22B71.41
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B528.44
thymus, embryo E14.CNhs11041.402-44I42.23
thymus, embryo E15.CNhs11005.430-45I22.67
thymus, embryo E16.CNhs11002.456-26C57.67
thymus, embryo E17.CNhs10581.478-18C118.08
thymus, embryo E18.CNhs10595.1273-19G428.41
thymus, neonate N02.CNhs11181.1541-43F829.33
thymus, neonate N03.CNhs11137.2104-43C733.08
thymus, neonate N06.CNhs11197.681-26C438.17
thymus, neonate N07.CNhs11211.713-19D336.73
thymus, neonate N10.CNhs11194.748-24E447.89
thymus, neonate N20.CNhs11186.820-7A241.61
thymus, neonate N25.CNhs11125.1362-25G750.42
thymus, neonate N30.CNhs11132.1393-42G263.23
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F51.50
uterus, adult.CNhs10509.92-27E51.65
vagina, adult.CNhs10502.89-27D51.93
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H21.88
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
hematopoietic lineage restricted progenitor cell8.58e-0725

Uber anatomy
Ontology termp-valuen
hemopoietic organ7.17e-1329
immune organ7.17e-1329
mixed endoderm/mesoderm-derived structure5.99e-1235
lateral plate mesoderm2.58e-1187
gland of gut5.80e-1124
mesoderm1.10e-10120
mesoderm-derived structure1.10e-10120
presumptive mesoderm1.10e-10120
thymus1.99e-1023
neck1.99e-1023
respiratory system epithelium1.99e-1023
hemolymphoid system gland1.99e-1023
pharyngeal epithelium1.99e-1023
thymic region1.99e-1023
pharyngeal gland1.99e-1023
entire pharyngeal arch endoderm1.99e-1023
thymus primordium1.99e-1023
early pharyngeal endoderm1.99e-1023
pharynx2.77e-1024
upper respiratory tract2.77e-1024
chordate pharynx2.77e-1024
pharyngeal arch system2.77e-1024
pharyngeal region of foregut2.77e-1024
hematopoietic system5.44e-1045
blood island5.44e-1045
hemolymphoid system1.66e-0948
immune system1.66e-0948
respiratory system3.31e-0842
segment of respiratory tract4.21e-0827
respiratory tract9.28e-0841
anterior region of body9.44e-0743







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