FFCP PHASE1:Hg19::chr5:72416428..72416441,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=134285 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27031 | |||
|TSSclassifier=S | |||
|UniProt=Q8WVE6 | |||
|association_with_transcript=32bp_to_ENST00000287773_5end | |||
|coexpression_cluster_id=C4517 | |||
|description=CAGE_peak_3_at_TMEM171_5end | |||
|id=chr5:72416428..72416441,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.79e-20!180;CL:0000222!1.00e-16!119;CL:0000359!1.14e-16!32;CL:0000192!7.67e-16!42;CL:0000514!7.67e-16!42;CL:0000183!6.28e-15!59;CL:0000680!5.06e-14!57;CL:0000056!5.06e-14!57;CL:0000355!5.06e-14!57;CL:0000057!7.48e-13!75;CL:0000187!7.70e-13!54;CL:0000393!8.19e-11!60;CL:0000211!8.19e-11!60;CL:0002321!4.75e-09!248;CL:0000220!6.85e-09!246;CL:0002620!1.48e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.80e-24;32!CL:0000192;6.31e-13;43!CL:0002539;1.76e-10;10!CL:1000413;2.24e-10;9!CL:0002559;8.94e-08;5!CL:0002594;3.90e-07;4!CL:0002494;8.88e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,5.80e-26,32;CL:0000192,2.84e-17,43;CL:0000514,2.84e-17,43;CL:0000222,5.52e-15,121;CL:0000680,2.76e-13,58;CL:0000056,2.76e-13,58;CL:0000355,2.76e-13,58;CL:0000187,7.14e-12,55;CL:0002539,1.05e-10,10;CL:1000413,1.27e-10,9;CL:0000393,5.18e-10,61;CL:0000211,5.18e-10,61;CL:0002321,3.17e-08,250;CL:0002559,7.55e-08,5;CL:0002594,5.30e-07,4;CL:0002494,7.36e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000514;6.31e-13;43!CL:0000355;4.86e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!2.68e-23!42;UBERON:0003509!2.68e-23!42;UBERON:0004572!2.68e-23!42;UBERON:0000055!4.40e-18!69;UBERON:0002049!5.46e-18!79;UBERON:0007798!5.46e-18!79;UBERON:0000914!3.14e-17!83;UBERON:0002329!3.14e-17!83;UBERON:0003077!3.14e-17!83;UBERON:0003059!3.14e-17!83;UBERON:0007282!3.14e-17!83;UBERON:0009618!3.14e-17!83;UBERON:0007285!3.14e-17!83;UBERON:0004573!3.66e-17!33;UBERON:0004571!3.66e-17!33;UBERON:0000486!5.30e-17!82;UBERON:0001981!1.67e-16!60;UBERON:0007500!1.67e-16!60;UBERON:0004537!1.67e-16!60;UBERON:0006965!1.67e-16!60;UBERON:0004290!3.76e-16!70;UBERON:0004872!7.62e-16!84;UBERON:0005256!1.08e-13!143;UBERON:0003914!5.05e-13!118;UBERON:0004535!2.25e-12!110;UBERON:0001134!6.69e-12!61;UBERON:0002036!6.69e-12!61;UBERON:0003082!6.69e-12!61;UBERON:0002385!7.73e-12!63;UBERON:0001015!7.73e-12!63;UBERON:0000383!7.73e-12!63;UBERON:0001009!8.71e-12!113;UBERON:0000119!1.02e-10!312;UBERON:0000490!2.87e-10!138;UBERON:0000483!8.88e-10!309;UBERON:0000947!2.73e-09!21;UBERON:0010191!2.73e-09!21;UBERON:0000477!1.11e-08!286;UBERON:0002100!3.11e-08!216;UBERON:0000481!1.65e-07!347;UBERON:0000475!2.59e-07!365;UBERON:0000467!2.62e-07!625;UBERON:0000468!2.71e-07!659;UBERON:0000480!3.50e-07!626;UBERON:0002097!5.54e-07!40;UBERON:0004111!8.31e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;3.15e-30;42!UBERON:0003509;3.15e-30;42!UBERON:0004572;3.15e-30;42!UBERON:0004573;1.86e-26;33!UBERON:0004571;1.86e-26;33!UBERON:0007500;3.33e-15;56!UBERON:0001981;3.33e-15;56!UBERON:0004537;3.33e-15;56!UBERON:0000055;1.84e-14;65!UBERON:0000947;2.42e-14;21!UBERON:0010191;2.42e-14;21!UBERON:0002049;1.23e-10;75!UBERON:0007798;1.23e-10;75!UBERON:0004237;1.76e-10;10!UBERON:0004695;1.76e-10;10!UBERON:0002111;1.76e-10;10!UBERON:0004178;1.76e-10;10!UBERON:0003915;2.24e-10;9!UBERON:0004700;2.24e-10;9!UBERON:0001917;2.24e-10;9!UBERON:0003914;2.45e-10;74!UBERON:0002067;1.43e-09;9!UBERON:0001135;6.99e-08;15!UBERON:0002073;8.94e-08;5!UBERON:0001310;3.90e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,1.12e-41,42;UBERON:0003509,1.12e-41,42;UBERON:0004572,1.12e-41,42;UBERON:0004573,4.67e-29,33;UBERON:0004571,4.67e-29,33;UBERON:0000055,2.17e-27,68;UBERON:0007500,3.37e-26,59;UBERON:0001981,3.37e-26,59;UBERON:0004537,3.37e-26,59;UBERON:0006965,3.37e-26,59;UBERON:0004872,2.55e-24,83;UBERON:0002049,1.35e-23,78;UBERON:0007798,1.35e-23,78;UBERON:0004535,1.85e-19,109;UBERON:0001009,1.46e-18,112;UBERON:0003914,2.35e-18,117;UBERON:0000486,3.19e-18,83;UBERON:0002329,5.46e-18,71;UBERON:0003059,5.46e-18,71;UBERON:0007282,5.46e-18,71;UBERON:0004290,5.46e-18,71;UBERON:0009618,5.46e-18,71;UBERON:0003077,1.36e-17,72;UBERON:0007285,1.36e-17,72;UBERON:0007524,3.31e-17,73;UBERON:0007503,1.28e-16,78;UBERON:0000947,9.96e-15,21;UBERON:0010191,9.96e-15,21;UBERON:0000490,5.16e-13,148;UBERON:0002385,2.77e-12,64;UBERON:0001015,2.77e-12,64;UBERON:0000383,2.77e-12,64;UBERON:0001134,6.38e-12,62;UBERON:0002036,6.38e-12,62;UBERON:0003082,6.38e-12,62;UBERON:0004237,1.05e-10,10;UBERON:0004695,1.05e-10,10;UBERON:0002111,1.05e-10,10;UBERON:0004178,1.05e-10,10;UBERON:0003915,1.27e-10,9;UBERON:0004700,1.27e-10,9;UBERON:0001917,1.27e-10,9;UBERON:0005256,7.36e-10,122;UBERON:0002067,1.26e-09,9;UBERON:0004016,1.26e-09,9;UBERON:0010083,1.26e-09,9;UBERON:0000119,2.25e-09,309;UBERON:0003498,2.31e-09,5;UBERON:0005985,2.31e-09,5;UBERON:0003104,2.29e-08,160;UBERON:0009142,2.29e-08,160;UBERON:0000483,4.18e-08,306;UBERON:0001135,5.37e-08,15;UBERON:0002073,7.55e-08,5;UBERON:0005086,7.55e-08,5;UBERON:0004111,2.58e-07,240;UBERON:0000025,2.80e-07,192;UBERON:0001310,5.30e-07,4;UBERON:0000926,8.14e-07,315;UBERON:0004120,8.14e-07,315;UBERON:0006603,8.14e-07,315 | |||
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| |||
|short_description=p3@TMEM171 | |||
}} |
Revision as of 16:21, 13 September 2013
Short description: | p3@TMEM171 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_TMEM171_5end |
Coexpression cluster: | C4517_Smooth_mesenchymal_colon_Meningeal_large_Preadipocyte_Fibroblast |
Association with transcript: | 32bp_to_ENST00000287773_5end |
EntrezGene: | TMEM171 |
HGNC: | 27031 |
UniProt: | Q8WVE6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 5.80e-26 | 32 |
smooth muscle cell | 2.84e-17 | 43 |
smooth muscle myoblast | 2.84e-17 | 43 |
mesodermal cell | 5.52e-15 | 121 |
muscle precursor cell | 2.76e-13 | 58 |
myoblast | 2.76e-13 | 58 |
multi-potent skeletal muscle stem cell | 2.76e-13 | 58 |
muscle cell | 7.14e-12 | 55 |
aortic smooth muscle cell | 1.05e-10 | 10 |
endothelial cell of artery | 1.27e-10 | 9 |
electrically responsive cell | 5.18e-10 | 61 |
electrically active cell | 5.18e-10 | 61 |
embryonic cell | 3.17e-08 | 250 |
hair follicle cell | 7.55e-08 | 5 |
smooth muscle cell of the umbilical artery | 5.30e-07 | 4 |
cardiocyte | 7.36e-07 | 16 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.