FFCP PHASE1:Hg19::chr5:92526866..92526914,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C391|description=CAGE_peak_at_chr5:92526866..92526914,-|id=chr5:92526866..92526914,-|ontology_enrichment_celltype=CL:0000064!2.67e-21!3;CL:0005012!2.67e-21!3;CL:0000067!2.67e-21!3;CL:0002304!2.67e-21!3;CL:0000342!1.21e-16!1;CL:0002565!1.21e-16!1;CL:0000306!2.44e-16!4;CL:0002222!2.44e-16!4;CL:0002224!2.44e-16!4;CL:0000075!2.20e-09!27|ontology_enrichment_celltype_v019=CL:0000322;3.66e-23;3!CL:0000306;9.45e-18;4!CL:0002222;9.45e-18;4!CL:0002224;9.45e-18;4!CL:0000082;5.09e-15;19!CL:0002202;1.16e-08;9!CL:0002632;1.16e-08;9|ontology_enrichment_celltype_v019_2=CL:0000322,3.27e-23,3;CL:0000306,1.03e-17,4;CL:0002222,1.03e-17,4;CL:0002224,1.03e-17,4;CL:0000082,4.91e-15,19;CL:0002202,1.12e-08,9;CL:0002632,1.12e-08,9|ontology_enrichment_development_v019=UBERON:0008947;3.03e-10;29!UBERON:0001041;6.09e-10;30|ontology_enrichment_disease=DOID:3908!1.63e-13!5;DOID:3910!3.71e-09!2;DOID:4074!4.70e-09!2;DOID:4905!4.70e-09!2;DOID:3498!4.70e-09!2;DOID:3905!6.55e-08!9|ontology_enrichment_disease_v019=DOID:3908;2.51e-53;5!DOID:3910;5.96e-34;2!DOID:3905;2.87e-30;9!DOID:4556;2.62e-23;3!DOID:1324;1.08e-18;15!DOID:0050615;1.33e-17;16!DOID:1325;9.43e-11;7!DOID:3904;9.43e-11;7|ontology_enrichment_disease_v019_2=DOID:3908,2.19e-53,5;DOID:3910,5.04e-34,2;DOID:3905,2.66e-30,9;DOID:4556,2.62e-23,3;DOID:1324,1.04e-18,15;DOID:0050615,1.27e-17,16;DOID:1325,8.99e-11,7;DOID:3904,8.99e-11,7|ontology_enrichment_uberon=UBERON:0007625!1.62e-49!11;UBERON:0000488!7.56e-35!4;UBERON:0000019!1.15e-28!19;UBERON:0000047!1.15e-28!19;UBERON:0004088!1.15e-28!19;UBERON:0003072!1.15e-28!19;UBERON:0003071!1.15e-28!19;UBERON:0004128!1.15e-28!19;UBERON:0001801!2.73e-27!14;UBERON:0000970!3.13e-27!20;UBERON:0002104!6.24e-26!21;UBERON:0001456!6.24e-26!21;UBERON:0000020!1.14e-23!23;UBERON:0002203!1.69e-23!6;UBERON:0001768!1.69e-23!6;UBERON:0001032!1.12e-22!24;UBERON:0004456!1.12e-22!24;UBERON:0001778!2.67e-21!3;UBERON:0001775!2.67e-21!3;UBERON:0005085!9.51e-19!29;UBERON:0002506!1.21e-16!1;UBERON:0001769!1.21e-16!1;UBERON:0010077!2.44e-16!4;UBERON:0005389!2.44e-16!4;UBERON:0000484!2.44e-16!4;UBERON:0002546!2.44e-16!4;UBERON:0000965!2.44e-16!4;UBERON:0001803!2.44e-16!4;UBERON:0003073!2.44e-16!4;UBERON:0005426!2.44e-16!4;UBERON:0003075!2.17e-13!86;UBERON:0007284!2.17e-13!86;UBERON:0002200!3.95e-13!11;UBERON:0006876!3.95e-13!11;UBERON:0002346!9.13e-13!90;UBERON:0000063!5.26e-12!97;UBERON:0001444!2.98e-11!48;UBERON:0004903!3.71e-09!2;UBERON:0002173!3.71e-09!2;UBERON:0002186!3.71e-09!2;UBERON:0002360!6.94e-09!2;UBERON:0000094!6.94e-09!2;UBERON:0007645!6.94e-09!2;UBERON:0003056!1.19e-08!61;UBERON:0000076!1.22e-08!8;UBERON:0004121!6.84e-08!169;UBERON:0000924!1.09e-07!173;UBERON:0006601!1.09e-07!173|ontology_enrichment_uberon_v019=UBERON:0004903;5.96e-34;2!UBERON:0002173;5.96e-34;2!UBERON:0002186;5.96e-34;2!UBERON:0004821;3.66e-23;3!UBERON:0007499;3.66e-23;3!UBERON:0003215;3.66e-23;3!UBERON:0010368;3.66e-23;3!UBERON:0009911;3.66e-23;3!UBERON:0002299;3.66e-23;3!UBERON:0006524;3.66e-23;3!UBERON:0008874;3.66e-23;3!UBERON:0002169;3.66e-23;3!UBERON:0004894;3.66e-23;3!UBERON:0010077;9.45e-18;4!UBERON:0005389;9.45e-18;4!UBERON:0000484;9.45e-18;4!UBERON:0009856;9.45e-18;4!UBERON:0000965;9.45e-18;4!UBERON:0001803;9.45e-18;4!UBERON:0004802;5.09e-15;19!UBERON:0000115;5.09e-15;19!UBERON:0002048;3.89e-13;22!UBERON:0004807;3.89e-13;22!UBERON:0000117;3.89e-13;22!UBERON:0000171;3.89e-13;22!UBERON:0000170;3.89e-13;22!UBERON:0000490;2.30e-08;33!UBERON:0005178;5.48e-08;34!UBERON:0002224;5.48e-08;34!UBERON:0005911;5.52e-08;36!UBERON:0000058;6.34e-08;10!UBERON:0005181;2.46e-07;35!UBERON:0007625;2.55e-07;11|ontology_enrichment_uberon_v019_2=UBERON:0004903,5.04e-34,2;UBERON:0002173,5.04e-34,2;UBERON:0002186,5.04e-34,2;UBERON:0004821,3.27e-23,3;UBERON:0003215,3.27e-23,3;UBERON:0010368,3.27e-23,3;UBERON:0009911,3.27e-23,3;UBERON:0002299,3.27e-23,3;UBERON:0006524,3.27e-23,3;UBERON:0008874,3.27e-23,3;UBERON:0002169,3.27e-23,3;UBERON:0004894,3.27e-23,3;UBERON:0010077,1.03e-17,4;UBERON:0005389,1.03e-17,4;UBERON:0000484,1.03e-17,4;UBERON:0002546,1.03e-17,4;UBERON:0000965,1.03e-17,4;UBERON:0001803,1.03e-17,4;UBERON:0003073,1.03e-17,4;UBERON:0005426,1.03e-17,4;UBERON:0004802,4.91e-15,19;UBERON:0000115,4.91e-15,19;UBERON:0002048,3.77e-13,22;UBERON:0000117,3.77e-13,22;UBERON:0000171,3.77e-13,22;UBERON:0000170,3.77e-13,22;UBERON:0005597,3.77e-13,22;UBERON:0000118,3.77e-13,22;UBERON:0004807,1.40e-10,28;UBERON:0000076,1.47e-09,8;UBERON:0005178,6.54e-09,34;UBERON:0002224,6.54e-09,34;UBERON:0005181,1.09e-08,35;UBERON:0005153,2.82e-08,37;UBERON:0008947,4.36e-08,38;UBERON:0003258,4.36e-08,38;UBERON:0007625,2.63e-07,11;UBERON:0000072,9.72e-07,47;UBERON:0005157,9.72e-07,47|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C391 | |||
|description=CAGE_peak_at_chr5:92526866..92526914,- | |||
|id=chr5:92526866..92526914,- | |||
|ontology_enrichment_celltype=CL:0000064!2.67e-21!3;CL:0005012!2.67e-21!3;CL:0000067!2.67e-21!3;CL:0002304!2.67e-21!3;CL:0000342!1.21e-16!1;CL:0002565!1.21e-16!1;CL:0000306!2.44e-16!4;CL:0002222!2.44e-16!4;CL:0002224!2.44e-16!4;CL:0000075!2.20e-09!27 | |||
|ontology_enrichment_celltype_v019=CL:0000322;3.66e-23;3!CL:0000306;9.45e-18;4!CL:0002222;9.45e-18;4!CL:0002224;9.45e-18;4!CL:0000082;5.09e-15;19!CL:0002202;1.16e-08;9!CL:0002632;1.16e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,3.27e-23,3;CL:0000306,1.03e-17,4;CL:0002222,1.03e-17,4;CL:0002224,1.03e-17,4;CL:0000082,4.91e-15,19;CL:0002202,1.12e-08,9;CL:0002632,1.12e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.03e-10;29!UBERON:0001041;6.09e-10;30 | |||
|ontology_enrichment_disease=DOID:3908!1.63e-13!5;DOID:3910!3.71e-09!2;DOID:4074!4.70e-09!2;DOID:4905!4.70e-09!2;DOID:3498!4.70e-09!2;DOID:3905!6.55e-08!9 | |||
|ontology_enrichment_disease_v019=DOID:3908;2.51e-53;5!DOID:3910;5.96e-34;2!DOID:3905;2.87e-30;9!DOID:4556;2.62e-23;3!DOID:1324;1.08e-18;15!DOID:0050615;1.33e-17;16!DOID:1325;9.43e-11;7!DOID:3904;9.43e-11;7 | |||
|ontology_enrichment_disease_v019_2=DOID:3908,2.19e-53,5;DOID:3910,5.04e-34,2;DOID:3905,2.66e-30,9;DOID:4556,2.62e-23,3;DOID:1324,1.04e-18,15;DOID:0050615,1.27e-17,16;DOID:1325,8.99e-11,7;DOID:3904,8.99e-11,7 | |||
|ontology_enrichment_uberon=UBERON:0007625!1.62e-49!11;UBERON:0000488!7.56e-35!4;UBERON:0000019!1.15e-28!19;UBERON:0000047!1.15e-28!19;UBERON:0004088!1.15e-28!19;UBERON:0003072!1.15e-28!19;UBERON:0003071!1.15e-28!19;UBERON:0004128!1.15e-28!19;UBERON:0001801!2.73e-27!14;UBERON:0000970!3.13e-27!20;UBERON:0002104!6.24e-26!21;UBERON:0001456!6.24e-26!21;UBERON:0000020!1.14e-23!23;UBERON:0002203!1.69e-23!6;UBERON:0001768!1.69e-23!6;UBERON:0001032!1.12e-22!24;UBERON:0004456!1.12e-22!24;UBERON:0001778!2.67e-21!3;UBERON:0001775!2.67e-21!3;UBERON:0005085!9.51e-19!29;UBERON:0002506!1.21e-16!1;UBERON:0001769!1.21e-16!1;UBERON:0010077!2.44e-16!4;UBERON:0005389!2.44e-16!4;UBERON:0000484!2.44e-16!4;UBERON:0002546!2.44e-16!4;UBERON:0000965!2.44e-16!4;UBERON:0001803!2.44e-16!4;UBERON:0003073!2.44e-16!4;UBERON:0005426!2.44e-16!4;UBERON:0003075!2.17e-13!86;UBERON:0007284!2.17e-13!86;UBERON:0002200!3.95e-13!11;UBERON:0006876!3.95e-13!11;UBERON:0002346!9.13e-13!90;UBERON:0000063!5.26e-12!97;UBERON:0001444!2.98e-11!48;UBERON:0004903!3.71e-09!2;UBERON:0002173!3.71e-09!2;UBERON:0002186!3.71e-09!2;UBERON:0002360!6.94e-09!2;UBERON:0000094!6.94e-09!2;UBERON:0007645!6.94e-09!2;UBERON:0003056!1.19e-08!61;UBERON:0000076!1.22e-08!8;UBERON:0004121!6.84e-08!169;UBERON:0000924!1.09e-07!173;UBERON:0006601!1.09e-07!173 | |||
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|short_description=p@chr5:92526866..92526914,- | |||
}} |
Revision as of 16:53, 13 September 2013
Short description: | p@chr5:92526866..92526914, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:92526866..92526914, - |
Coexpression cluster: | C391_large_bronchioalveolar_fibrosarcoma_lung_pancreatic_giant_testis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 3.27e-23 | 3 |
crystallin accumulating cell | 1.03e-17 | 4 |
vertebrate lens cell | 1.03e-17 | 4 |
lens epithelial cell | 1.03e-17 | 4 |
epithelial cell of lung | 4.91e-15 | 19 |
epithelial cell of tracheobronchial tree | 1.12e-08 | 9 |
epithelial cell of lower respiratory tract | 1.12e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
non-small cell lung carcinoma | 2.19e-53 | 5 |
lung adenocarcinoma | 5.04e-34 | 2 |
lung carcinoma | 2.66e-30 | 9 |
lung large cell carcinoma | 2.62e-23 | 3 |
lung cancer | 1.04e-18 | 15 |
respiratory system cancer | 1.27e-17 | 16 |
bronchus cancer | 8.99e-11 | 7 |
bronchogenic carcinoma | 8.99e-11 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.