FFCP PHASE1:Mm9::chr19:38236709..38236722,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=229|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:38236709..38236722,+|id=chr19:38236709..38236722,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!9.32e-12!22;UBERON:0007499!9.32e-12!22;UBERON:0006925!9.32e-12!22;UBERON:0009497!9.32e-12!22;UBERON:0000015!9.32e-12!22;UBERON:0002423!9.32e-12!22;UBERON:0006235!9.32e-12!22;UBERON:0008835!9.32e-12!22;UBERON:0003894!9.32e-12!22;UBERON:0004161!9.32e-12!22;UBERON:0008836!9.32e-12!22;UBERON:0009854!5.39e-11!23;UBERON:0009856!5.39e-11!23;UBERON:0002365!1.16e-09!25;UBERON:0002330!1.16e-09!25;UBERON:0005172!7.65e-08!49;UBERON:0005173!7.65e-08!49;UBERON:0002417!7.65e-08!49;UBERON:0000916!7.65e-08!49|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.92e-18,22;UBERON:0007499,1.92e-18,22;UBERON:0006925,1.92e-18,22;UBERON:0009497,1.92e-18,22;UBERON:0000015,1.92e-18,22;UBERON:0002423,1.92e-18,22;UBERON:0006235,1.92e-18,22;UBERON:0008835,1.92e-18,22;UBERON:0003894,1.92e-18,22;UBERON:0004161,1.92e-18,22;UBERON:0008836,1.92e-18,22;UBERON:0009854,1.86e-17,23;UBERON:0009856,1.86e-17,23;UBERON:0002365,1.01e-15,25;UBERON:0002330,1.01e-15,25;UBERON:0005256,6.77e-08,45;UBERON:0005172,6.33e-07,49;UBERON:0005173,6.33e-07,49;UBERON:0002417,6.33e-07,49;UBERON:0000916,6.33e-07,49|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0.608930956624282,0.461230994512117,0.452167921657868,1.17588707135705,0,55.1244778047654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0.60281927134286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469052119962192,0,0,0,0,0,0.536546802799238,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0.213288250535234,0.696710015581316,0.128867461322093,0,0,0,0,0.823494773620054,0.502670417600539,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0.126473074248515,0,0,0,0.296452627087149,5.5058884886311,6.6830058338489,9.89393294493356,13.1859078902527,24.1177159752417,24.6987076227977,29.9203982948843,38.5881839724584,48.5973701342904,74.7594673942244,69.9624981616786,83.3140587215877,36.8765161802783,3.94674309748207,4.3419916922703,0,0.189491411770485,0.162964976442026,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485561272309963,0,0,0,0.614870295887855,0.775284879504663,0.363533729477506,0.712994756769443,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0.23467170806371,1.69465656691056,0,0,0,0,0,0,0,0,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0.632671987162271,0.609958401380546,0.108005340821801,0.418176592028937,0.218362563746178,0.809186078308924,6.11635572367486,0,0,0,0,0,0,0,0,0,0,1.8228613878153,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.853668028770671,3.16038732188782,2.09613162627982,2.20612210140017,3.55594764482584,1.64828045791115,1.28367683836726,1.01078884705519,2.78827229879264,1.88626341386076,2.52832070168682,2.56100609619477,2.35485422718014,2.85776214769844,1.85414921511769,2.31491064556446,0.412085900803307,2.50238164228475,0.342869252385415,1.95223386775271,1.90748951957857,2.18019624948493,1.88218760830661,2.03075058940024,2.37806364734604,1.31534855718921,2.71608227691724,0.561142271657738,2.25406534435931,1.37906275325789,2.86461730218783,1.85924209423159,1.73615949883027,0,2.10538447600868,4.51229213501426,0.191288332068843,0.220591419119515,0.463735671240843|short_description=p@chr19:38236709..38236722,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=229 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:38236709..38236722,+ | |||
|id=chr19:38236709..38236722,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!9.32e-12!22;UBERON:0007499!9.32e-12!22;UBERON:0006925!9.32e-12!22;UBERON:0009497!9.32e-12!22;UBERON:0000015!9.32e-12!22;UBERON:0002423!9.32e-12!22;UBERON:0006235!9.32e-12!22;UBERON:0008835!9.32e-12!22;UBERON:0003894!9.32e-12!22;UBERON:0004161!9.32e-12!22;UBERON:0008836!9.32e-12!22;UBERON:0009854!5.39e-11!23;UBERON:0009856!5.39e-11!23;UBERON:0002365!1.16e-09!25;UBERON:0002330!1.16e-09!25;UBERON:0005172!7.65e-08!49;UBERON:0005173!7.65e-08!49;UBERON:0002417!7.65e-08!49;UBERON:0000916!7.65e-08!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.92e-18,22;UBERON:0007499,1.92e-18,22;UBERON:0006925,1.92e-18,22;UBERON:0009497,1.92e-18,22;UBERON:0000015,1.92e-18,22;UBERON:0002423,1.92e-18,22;UBERON:0006235,1.92e-18,22;UBERON:0008835,1.92e-18,22;UBERON:0003894,1.92e-18,22;UBERON:0004161,1.92e-18,22;UBERON:0008836,1.92e-18,22;UBERON:0009854,1.86e-17,23;UBERON:0009856,1.86e-17,23;UBERON:0002365,1.01e-15,25;UBERON:0002330,1.01e-15,25;UBERON:0005256,6.77e-08,45;UBERON:0005172,6.33e-07,49;UBERON:0005173,6.33e-07,49;UBERON:0002417,6.33e-07,49;UBERON:0000916,6.33e-07,49 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0.608930956624282,0.461230994512117,0.452167921657868,1.17588707135705,0,55.1244778047654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0.60281927134286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469052119962192,0,0,0,0,0,0.536546802799238,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0.213288250535234,0.696710015581316,0.128867461322093,0,0,0,0,0.823494773620054,0.502670417600539,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0.126473074248515,0,0,0,0.296452627087149,5.5058884886311,6.6830058338489,9.89393294493356,13.1859078902527,24.1177159752417,24.6987076227977,29.9203982948843,38.5881839724584,48.5973701342904,74.7594673942244,69.9624981616786,83.3140587215877,36.8765161802783,3.94674309748207,4.3419916922703,0,0.189491411770485,0.162964976442026,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485561272309963,0,0,0,0.614870295887855,0.775284879504663,0.363533729477506,0.712994756769443,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0.23467170806371,1.69465656691056,0,0,0,0,0,0,0,0,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0.632671987162271,0.609958401380546,0.108005340821801,0.418176592028937,0.218362563746178,0.809186078308924,6.11635572367486,0,0,0,0,0,0,0,0,0,0,1.8228613878153,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.853668028770671,3.16038732188782,2.09613162627982,2.20612210140017,3.55594764482584,1.64828045791115,1.28367683836726,1.01078884705519,2.78827229879264,1.88626341386076,2.52832070168682,2.56100609619477,2.35485422718014,2.85776214769844,1.85414921511769,2.31491064556446,0.412085900803307,2.50238164228475,0.342869252385415,1.95223386775271,1.90748951957857,2.18019624948493,1.88218760830661,2.03075058940024,2.37806364734604,1.31534855718921,2.71608227691724,0.561142271657738,2.25406534435931,1.37906275325789,2.86461730218783,1.85924209423159,1.73615949883027,0,2.10538447600868,4.51229213501426,0.191288332068843,0.220591419119515,0.463735671240843 | |||
|short_description=p@chr19:38236709..38236722,+ | |||
}} |
Revision as of 17:30, 13 September 2013
Short description: | p@chr19:38236709..38236722, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:38236709..38236722, + |
Coexpression cluster: | MCL_coexpression_mm9:229 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
liver | 1.92e-18 | 22 |
epithelial sac | 1.92e-18 | 22 |
digestive gland | 1.92e-18 | 22 |
epithelium of foregut-midgut junction | 1.92e-18 | 22 |
anatomical boundary | 1.92e-18 | 22 |
hepatobiliary system | 1.92e-18 | 22 |
foregut-midgut junction | 1.92e-18 | 22 |
hepatic diverticulum | 1.92e-18 | 22 |
liver primordium | 1.92e-18 | 22 |
septum transversum | 1.92e-18 | 22 |
liver bud | 1.92e-18 | 22 |
digestive tract diverticulum | 1.86e-17 | 23 |
sac | 1.86e-17 | 23 |
exocrine gland | 1.01e-15 | 25 |
exocrine system | 1.01e-15 | 25 |
trunk mesenchyme | 6.77e-08 | 45 |
abdomen element | 6.33e-07 | 49 |
abdominal segment element | 6.33e-07 | 49 |
abdominal segment of trunk | 6.33e-07 | 49 |
abdomen | 6.33e-07 | 49 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.