FFCP PHASE1:Mm9::chr19:46379320..46379329,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=18034|HGNC=|MCL_coexpression_id=210|UniProt=|association_with_transcript=30bp_to_uc008hsv.1_5end|description=CAGE_peak_9_at_Nfkb2_5end|id=chr19:46379320..46379329,+|ontology_enrichment_celltype=CL:0000063!1.09e-16!66;CL:0000144!2.40e-14!121;CL:0000012!2.40e-14!121;CL:0000791!1.58e-12!9;CL:0000789!1.58e-12!9;CL:0002420!1.58e-12!9;CL:0002419!1.58e-12!9;CL:0000790!1.58e-12!9;CL:0002371!1.59e-11!118;CL:0000838!1.63e-11!12;CL:0000624!7.73e-11!8;CL:0000542!1.78e-10!13;CL:0000051!1.78e-10!13;CL:0000548!3.93e-10!115;CL:0000004!3.93e-10!115;CL:0000255!3.93e-10!115;CL:0000034!4.35e-10!97;CL:0000988!5.67e-10!32;CL:0002032!5.67e-10!32;CL:0000037!5.67e-10!32;CL:0000566!5.67e-10!32;CL:0000837!5.67e-10!32;CL:0000084!5.91e-10!11;CL:0000827!5.91e-10!11;CL:0002320!4.09e-09!46;CL:0000134!4.09e-09!46;CL:0002563!8.16e-09!9;CL:0002251!8.16e-09!9;CL:0000723!3.87e-08!91;CL:0000048!3.87e-08!91;CL:0000219!5.86e-08!54;CL:0002076!6.18e-08!15;CL:0000066!7.37e-08!25;CL:0000893!1.18e-07!6;CL:0002489!1.18e-07!6;CL:0000898!1.18e-07!6;CL:0000809!1.18e-07!6;CL:0000810!1.18e-07!6;CL:0000895!1.18e-07!6;CL:0000808!1.18e-07!6;CL:0000894!1.18e-07!6;CL:0000806!1.18e-07!6;CL:0000807!1.18e-07!6;CL:0000805!1.18e-07!6;CL:0002425!1.18e-07!6;CL:0002436!1.18e-07!6;CL:0002427!1.18e-07!6;CL:0002428!1.18e-07!6;CL:0002429!1.18e-07!6;CL:0002433!1.18e-07!6;CL:0002431!1.18e-07!6;CL:0002432!1.18e-07!6;CL:0000738!1.48e-07!17;CL:0002087!1.48e-07!17;CL:0000223!4.30e-07!20|ontology_enrichment_celltype_v019_2=CL:0000988,1.43e-10,32;CL:0002032,1.43e-10,32;CL:0000037,1.43e-10,32;CL:0000837,1.43e-10,32;CL:0000838,1.29e-09,12;CL:0000542,7.29e-09,13;CL:0000051,7.29e-09,13;CL:0002320,9.06e-09,46;CL:0000134,9.06e-09,46;CL:0000034,1.18e-08,97;CL:0000791,1.50e-08,9;CL:0000789,1.50e-08,9;CL:0002420,1.50e-08,9;CL:0002419,1.50e-08,9;CL:0000790,1.50e-08,9;CL:0000219,2.99e-07,54;CL:0000084,5.11e-07,11;CL:0000827,5.11e-07,11;CL:0000738,9.81e-07,17;CL:0002087,9.81e-07,17|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!4.09e-09!46;UBERON:0003350!8.16e-09!9;UBERON:0004808!8.16e-09!9;UBERON:0001277!8.16e-09!9;UBERON:0000490!1.29e-07!66;UBERON:0000485!5.24e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0002384,9.06e-09,46|phase1_expression=0,0,0,0.30246421130683,1.00179145989269,0.33575854382378,0.934450562382103,1.54947988129892,1.68946466582,1.40438715793196,0,0.159544317990673,0.856003649656029,0.524522414513984,0,0,0,0.157731082679119,0,0,0,0,0,0.319984845586813,0,0,0.430761996159075,1.07735616342945,0,0,0,0,0,0,0.866554859253824,0.166234645358492,0.408338712524738,1.25559489221072,0,0.523523743973798,3.52938892818609,2.73218193983378,0,0,0.101376931219515,0.183546752161682,0,0,0,0,0,0,1.34226084846189,0.725362142011344,1.34437519656986,0,0.286533439938757,1.03134418455488,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,6.95674772884027,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0.253359865475099,0.505524445014783,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07833612055328,1.79970819298022,1.14363204365758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,1.80143534980301,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,4.9293744698218,3.91864066506242,2.62579950228405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p9@Nfkb2}} | ||
|EntrezGene=18034 | |||
|HGNC= | |||
|MCL_coexpression_id=210 | |||
|UniProt= | |||
|association_with_transcript=30bp_to_uc008hsv.1_5end | |||
|description=CAGE_peak_9_at_Nfkb2_5end | |||
|id=chr19:46379320..46379329,+ | |||
|ontology_enrichment_celltype=CL:0000063!1.09e-16!66;CL:0000144!2.40e-14!121;CL:0000012!2.40e-14!121;CL:0000791!1.58e-12!9;CL:0000789!1.58e-12!9;CL:0002420!1.58e-12!9;CL:0002419!1.58e-12!9;CL:0000790!1.58e-12!9;CL:0002371!1.59e-11!118;CL:0000838!1.63e-11!12;CL:0000624!7.73e-11!8;CL:0000542!1.78e-10!13;CL:0000051!1.78e-10!13;CL:0000548!3.93e-10!115;CL:0000004!3.93e-10!115;CL:0000255!3.93e-10!115;CL:0000034!4.35e-10!97;CL:0000988!5.67e-10!32;CL:0002032!5.67e-10!32;CL:0000037!5.67e-10!32;CL:0000566!5.67e-10!32;CL:0000837!5.67e-10!32;CL:0000084!5.91e-10!11;CL:0000827!5.91e-10!11;CL:0002320!4.09e-09!46;CL:0000134!4.09e-09!46;CL:0002563!8.16e-09!9;CL:0002251!8.16e-09!9;CL:0000723!3.87e-08!91;CL:0000048!3.87e-08!91;CL:0000219!5.86e-08!54;CL:0002076!6.18e-08!15;CL:0000066!7.37e-08!25;CL:0000893!1.18e-07!6;CL:0002489!1.18e-07!6;CL:0000898!1.18e-07!6;CL:0000809!1.18e-07!6;CL:0000810!1.18e-07!6;CL:0000895!1.18e-07!6;CL:0000808!1.18e-07!6;CL:0000894!1.18e-07!6;CL:0000806!1.18e-07!6;CL:0000807!1.18e-07!6;CL:0000805!1.18e-07!6;CL:0002425!1.18e-07!6;CL:0002436!1.18e-07!6;CL:0002427!1.18e-07!6;CL:0002428!1.18e-07!6;CL:0002429!1.18e-07!6;CL:0002433!1.18e-07!6;CL:0002431!1.18e-07!6;CL:0002432!1.18e-07!6;CL:0000738!1.48e-07!17;CL:0002087!1.48e-07!17;CL:0000223!4.30e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.43e-10,32;CL:0002032,1.43e-10,32;CL:0000037,1.43e-10,32;CL:0000837,1.43e-10,32;CL:0000838,1.29e-09,12;CL:0000542,7.29e-09,13;CL:0000051,7.29e-09,13;CL:0002320,9.06e-09,46;CL:0000134,9.06e-09,46;CL:0000034,1.18e-08,97;CL:0000791,1.50e-08,9;CL:0000789,1.50e-08,9;CL:0002420,1.50e-08,9;CL:0002419,1.50e-08,9;CL:0000790,1.50e-08,9;CL:0000219,2.99e-07,54;CL:0000084,5.11e-07,11;CL:0000827,5.11e-07,11;CL:0000738,9.81e-07,17;CL:0002087,9.81e-07,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!4.09e-09!46;UBERON:0003350!8.16e-09!9;UBERON:0004808!8.16e-09!9;UBERON:0001277!8.16e-09!9;UBERON:0000490!1.29e-07!66;UBERON:0000485!5.24e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,9.06e-09,46 | |||
|phase1_expression=0,0,0,0.30246421130683,1.00179145989269,0.33575854382378,0.934450562382103,1.54947988129892,1.68946466582,1.40438715793196,0,0.159544317990673,0.856003649656029,0.524522414513984,0,0,0,0.157731082679119,0,0,0,0,0,0.319984845586813,0,0,0.430761996159075,1.07735616342945,0,0,0,0,0,0,0.866554859253824,0.166234645358492,0.408338712524738,1.25559489221072,0,0.523523743973798,3.52938892818609,2.73218193983378,0,0,0.101376931219515,0.183546752161682,0,0,0,0,0,0,1.34226084846189,0.725362142011344,1.34437519656986,0,0.286533439938757,1.03134418455488,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,6.95674772884027,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0.253359865475099,0.505524445014783,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07833612055328,1.79970819298022,1.14363204365758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,1.80143534980301,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,4.9293744698218,3.91864066506242,2.62579950228405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p9@Nfkb2 | |||
}} |
Revision as of 17:50, 13 September 2013
Short description: | p9@Nfkb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Nfkb2_5end |
Coexpression cluster: | MCL_coexpression_mm9:210 |
Association with transcript: | 30bp_to_uc008hsv.1_5end |
EntrezGene: | Nfkb2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.43e-10 | 32 |
hematopoietic oligopotent progenitor cell | 1.43e-10 | 32 |
hematopoietic stem cell | 1.43e-10 | 32 |
hematopoietic multipotent progenitor cell | 1.43e-10 | 32 |
lymphoid lineage restricted progenitor cell | 1.29e-09 | 12 |
lymphocyte | 7.29e-09 | 13 |
common lymphoid progenitor | 7.29e-09 | 13 |
connective tissue cell | 9.06e-09 | 46 |
mesenchymal cell | 9.06e-09 | 46 |
stem cell | 1.18e-08 | 97 |
mature alpha-beta T cell | 1.50e-08 | 9 |
alpha-beta T cell | 1.50e-08 | 9 |
immature T cell | 1.50e-08 | 9 |
mature T cell | 1.50e-08 | 9 |
immature alpha-beta T cell | 1.50e-08 | 9 |
motile cell | 2.99e-07 | 54 |
T cell | 5.11e-07 | 11 |
pro-T cell | 5.11e-07 | 11 |
leukocyte | 9.81e-07 | 17 |
nongranular leukocyte | 9.81e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 9.06e-09 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.