FFCP PHASE1:Mm9::chr1:134195209..134195226,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=213417|HGNC=|MCL_coexpression_id=1176|UniProt=Q91XA8|association_with_transcript=6bp_to_ENSMUST00000046071,NM_144810,uc007con.1_5end|description=CAGE_peak_4_at_Klhdc8a_5end|id=chr1:134195209..134195226,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002453,4.91e-10,8;CL:0000333,1.02e-07,10;CL:0000095,1.02e-07,10;CL:0000243,1.02e-07,10;CL:0000123,1.02e-07,10;CL:0000125,1.02e-07,10;CL:0000030,1.02e-07,10;CL:0000339,1.02e-07,10;CL:0000128,1.63e-07,6;CL:0000126,1.63e-07,6;CL:0000127,1.63e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!4.28e-08!102;UBERON:0000924!4.28e-08!102;UBERON:0006601!4.28e-08!102;UBERON:0002346!6.58e-08!71;UBERON:0003075!6.58e-08!71;UBERON:0007284!6.58e-08!71|ontology_enrichment_uberon_v019_2=UBERON:0002369,5.05e-12,7;UBERON:0006858,5.05e-12,7;UBERON:0010314,2.75e-08,92;UBERON:0001444,5.73e-07,11|phase1_expression=0,0.697950815278722,0.454999239389536,0,0,0.839396359559449,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0.159992422793407,0.22940928106717,0,1.7230479846363,1.07735616342945,0.760093677825496,0.504060259519861,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.5467168890882,32.5135550447018,26.8313260722511,4.4795654920116,14.3752564364972,0,0,0,0.257259436035947,0,0.515672092277442,1.01158230429799,0.528990979272033,1.90149421051854,1.0165335962074,0.889294796111139,0.449949858640699,0.988866362566974,0,2.39680088414724,4.61061966385865,0.207379224616955,0,0,0,0,0,0,0,4.40463523997555,1.53224805702225,1.22885226604995,0.395658863190582,0.640413505216868,0.52091337055676,3.35019598801657,1.68828783009504,1.22238598221448,0.294628585473668,0.854230084794618,0.559198337475902,0,0,0.289864488701678,0,1.3599426674155,0,0,0.448026887097336,0.421333260395256,2.04516387093669,1.29893002301434,2.12003744706204,0,5.13305909657271,0,7.11066703153331,6.49473123033642,4.81383744402687,8.59391556525132,0.68510327831436,0,45.8686209710309,3.81667718885499,7.30717147949139,11.3001593655469,14.0172055713939,15.6392980490487,24.002318943968,0.247194967734374,0,0,0,0,0,0,0.878342391034642,0.83778682725382,0,0,0,0,1.64769703345305,0,0.251308704225729,0.347648640384553,0.767146371990992,1.0389402227978,1.1356888414743,0,0,0,0.841767423545896,0.260240885925407,1.37941262660084,1.0803727788321,1.9591626318643,2.78949646520444,3.07472928683639,1.68663104207512,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0,0,0,0,0.16455984991348,2.95501435342371,3.64809642956351,2.63159977365598,4.39100230582101,1.61047702512446,0.841159794256509,0.205809224758569,0,0,0,0,0,0,0.444756087689741,0.190225626112559,0,0.329397909448022,0.251335208800269,0,0.38992817423824,0,0.432276099749388,0.398282546508734,0.758671603812327,0.342745537829186,0,0.203651327845314,0.969762435838129,0.280543279561274,0.632365371242573,1.62371162777562,1.09899109488962,2.34454611451421,0.592905254174298,0,0,0,0.202860121388503,0,0,0,0,0.274561413188081,0,0.744281895337007,1.24815069245824,0.252578877947112,0.896987067609561,0.482443521363367,0.369506380333209,0,0,0,0,0.167506257441816,0.238043640886014,1.95133647857799,0.630540576424764,0.44292937929755,0,0.491589944147214,0.518054945597687,0.723245292907558,0,0,0,0,2.88991061978026,1.52375192569864,1.80328439914343,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0.178065603667255,0,0,1.32745138339963,0,0,0.188605079755898,0.295301892880773,0.307435147943927,0,0.363533729477506,0,0,2.10837217149998,3.09406629744561,0,0,0,0,0.177340233642274,0,0,0,0.469343416127421,0,0.220528398054962,0.16488625294148,0.161464426695906,0.180938774784468,0.119372344003136,0,0,1.8542530201051,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0,0,0,0.134864346384821,0.247960367176008,0.785267825952089,0.259229946583586,9.94142900939081,0,0,0.165458490457098,0.972255941720238,1.29159823477731,0.675824501963113,0.352071715937262,0.13020438484395,0.314578033277133,0,0.288030006257865,0.316011120628178,0,0.102710957164827,0,0.179026695667481,0,0.120195449519969,0.295379054349154,0.201932899896295,0.15241361331,0.201652370273681,0.0974578807397524,0.481059208201647,0.701261413089414,0,0,0.0897138566094757,0,0,0.375364950902364,0,1.2862102744744,0,0.564751842617067,0.920650473014354,0,0.171853182343688,0.685082519770642,0,0.675022500231806,0,0.906284817968409,1.03552062350364,0,0,0,0,0,0,0,0.412070114477788,0,0,0,0.188626341386076,0,0.384150914429216,0.114870937911227,0,0.231768651889711,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0,0.561142271657738,0.355905054372522,0.0985044823755635,0,0,0.192906610981141,0.499621155875892,0,0.214871054048298,0,0,0|short_description=p4@Klhdc8a}} | ||
|EntrezGene=213417 | |||
|HGNC= | |||
|MCL_coexpression_id=1176 | |||
|UniProt=Q91XA8 | |||
|association_with_transcript=6bp_to_ENSMUST00000046071,NM_144810,uc007con.1_5end | |||
|description=CAGE_peak_4_at_Klhdc8a_5end | |||
|id=chr1:134195209..134195226,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,4.91e-10,8;CL:0000333,1.02e-07,10;CL:0000095,1.02e-07,10;CL:0000243,1.02e-07,10;CL:0000123,1.02e-07,10;CL:0000125,1.02e-07,10;CL:0000030,1.02e-07,10;CL:0000339,1.02e-07,10;CL:0000128,1.63e-07,6;CL:0000126,1.63e-07,6;CL:0000127,1.63e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!4.28e-08!102;UBERON:0000924!4.28e-08!102;UBERON:0006601!4.28e-08!102;UBERON:0002346!6.58e-08!71;UBERON:0003075!6.58e-08!71;UBERON:0007284!6.58e-08!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,5.05e-12,7;UBERON:0006858,5.05e-12,7;UBERON:0010314,2.75e-08,92;UBERON:0001444,5.73e-07,11 | |||
|phase1_expression=0,0.697950815278722,0.454999239389536,0,0,0.839396359559449,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0.159992422793407,0.22940928106717,0,1.7230479846363,1.07735616342945,0.760093677825496,0.504060259519861,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.5467168890882,32.5135550447018,26.8313260722511,4.4795654920116,14.3752564364972,0,0,0,0.257259436035947,0,0.515672092277442,1.01158230429799,0.528990979272033,1.90149421051854,1.0165335962074,0.889294796111139,0.449949858640699,0.988866362566974,0,2.39680088414724,4.61061966385865,0.207379224616955,0,0,0,0,0,0,0,4.40463523997555,1.53224805702225,1.22885226604995,0.395658863190582,0.640413505216868,0.52091337055676,3.35019598801657,1.68828783009504,1.22238598221448,0.294628585473668,0.854230084794618,0.559198337475902,0,0,0.289864488701678,0,1.3599426674155,0,0,0.448026887097336,0.421333260395256,2.04516387093669,1.29893002301434,2.12003744706204,0,5.13305909657271,0,7.11066703153331,6.49473123033642,4.81383744402687,8.59391556525132,0.68510327831436,0,45.8686209710309,3.81667718885499,7.30717147949139,11.3001593655469,14.0172055713939,15.6392980490487,24.002318943968,0.247194967734374,0,0,0,0,0,0,0.878342391034642,0.83778682725382,0,0,0,0,1.64769703345305,0,0.251308704225729,0.347648640384553,0.767146371990992,1.0389402227978,1.1356888414743,0,0,0,0.841767423545896,0.260240885925407,1.37941262660084,1.0803727788321,1.9591626318643,2.78949646520444,3.07472928683639,1.68663104207512,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0,0,0,0,0.16455984991348,2.95501435342371,3.64809642956351,2.63159977365598,4.39100230582101,1.61047702512446,0.841159794256509,0.205809224758569,0,0,0,0,0,0,0.444756087689741,0.190225626112559,0,0.329397909448022,0.251335208800269,0,0.38992817423824,0,0.432276099749388,0.398282546508734,0.758671603812327,0.342745537829186,0,0.203651327845314,0.969762435838129,0.280543279561274,0.632365371242573,1.62371162777562,1.09899109488962,2.34454611451421,0.592905254174298,0,0,0,0.202860121388503,0,0,0,0,0.274561413188081,0,0.744281895337007,1.24815069245824,0.252578877947112,0.896987067609561,0.482443521363367,0.369506380333209,0,0,0,0,0.167506257441816,0.238043640886014,1.95133647857799,0.630540576424764,0.44292937929755,0,0.491589944147214,0.518054945597687,0.723245292907558,0,0,0,0,2.88991061978026,1.52375192569864,1.80328439914343,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0.178065603667255,0,0,1.32745138339963,0,0,0.188605079755898,0.295301892880773,0.307435147943927,0,0.363533729477506,0,0,2.10837217149998,3.09406629744561,0,0,0,0,0.177340233642274,0,0,0,0.469343416127421,0,0.220528398054962,0.16488625294148,0.161464426695906,0.180938774784468,0.119372344003136,0,0,1.8542530201051,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0,0,0,0.134864346384821,0.247960367176008,0.785267825952089,0.259229946583586,9.94142900939081,0,0,0.165458490457098,0.972255941720238,1.29159823477731,0.675824501963113,0.352071715937262,0.13020438484395,0.314578033277133,0,0.288030006257865,0.316011120628178,0,0.102710957164827,0,0.179026695667481,0,0.120195449519969,0.295379054349154,0.201932899896295,0.15241361331,0.201652370273681,0.0974578807397524,0.481059208201647,0.701261413089414,0,0,0.0897138566094757,0,0,0.375364950902364,0,1.2862102744744,0,0.564751842617067,0.920650473014354,0,0.171853182343688,0.685082519770642,0,0.675022500231806,0,0.906284817968409,1.03552062350364,0,0,0,0,0,0,0,0.412070114477788,0,0,0,0.188626341386076,0,0.384150914429216,0.114870937911227,0,0.231768651889711,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0,0.561142271657738,0.355905054372522,0.0985044823755635,0,0,0.192906610981141,0.499621155875892,0,0.214871054048298,0,0,0 | |||
|short_description=p4@Klhdc8a | |||
}} |
Revision as of 18:50, 13 September 2013
Short description: | p4@Klhdc8a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Klhdc8a_5end |
Coexpression cluster: | MCL_coexpression_mm9:1176 |
Association with transcript: | 6bp_to_ENSMUST00000046071, NM_144810, uc007con.1_5end |
EntrezGene: | Klhdc8a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 4.91e-10 | 8 |
migratory neural crest cell | 1.02e-07 | 10 |
neuron associated cell | 1.02e-07 | 10 |
glial cell (sensu Vertebrata) | 1.02e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 1.02e-07 | 10 |
glial cell | 1.02e-07 | 10 |
glioblast | 1.02e-07 | 10 |
glioblast (sensu Vertebrata) | 1.02e-07 | 10 |
oligodendrocyte | 1.63e-07 | 6 |
macroglial cell | 1.63e-07 | 6 |
astrocyte | 1.63e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 5.05e-12 | 7 |
adrenal/interrenal gland | 5.05e-12 | 7 |
structure with developmental contribution from neural crest | 2.75e-08 | 92 |
subdivision of head | 5.73e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.