FFCP PHASE1:Hg19::chr6:159660765..159660776,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C4579|description=CAGE_peak_at_chr6:159660765..159660776,+|id=chr6:159660765..159660776,+|ontology_enrichment_celltype=CL:0002580!9.38e-14!3;CL:0002617!5.26e-09!2;CL:0000057!5.77e-09!75;CL:0002334!7.85e-09!12;CL:0000135!8.13e-07!3;CL:0000386!8.13e-07!3;CL:0000388!8.13e-07!3|ontology_enrichment_celltype_v019=CL:0002580;8.74e-45;3!CL:0000135;1.09e-44;3!CL:0000388;1.09e-44;3!CL:0002334;2.13e-25;12!CL:0002579;3.06e-12;3|ontology_enrichment_celltype_v019_2=CL:0002580,7.81e-45,3;CL:0000135,9.77e-45,3;CL:0000388,9.77e-45,3;CL:0002334,2.14e-25,12;CL:0002579,3.24e-12,3;CL:0000057,2.52e-11,76|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000310!2.39e-10!10;UBERON:0001443!2.24e-09!11;UBERON:0000341!3.65e-09!2;UBERON:0000043!8.13e-07!3|ontology_enrichment_uberon_v019=UBERON:0007846;1.09e-44;3!UBERON:0000043;1.09e-44;3!UBERON:0007845;1.09e-44;3!UBERON:0000310;2.94e-14;10!UBERON:0001443;4.66e-13;11!UBERON:0003688;9.23e-07;6!UBERON:0002358;9.23e-07;6!UBERON:0003684;9.23e-07;6!UBERON:0001178;9.23e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0007846,9.77e-45,3;UBERON:0000043,9.77e-45,3;UBERON:0007845,9.77e-45,3;UBERON:0000310,2.84e-14,10;UBERON:0001443,4.52e-13,11;UBERON:0003688,9.49e-07,6;UBERON:0002358,9.49e-07,6;UBERON:0003684,9.49e-07,6;UBERON:0001178,9.49e-07,6|phase1_expression=0.181678379270557,0.642301571672949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.579386075843295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.989067717114227,0,0,0,0,0,0,0.612975591598039,0.45071417671979,0,0.179389635688862,0.213557388818567,0,0,0,0.257640540045629,0,0.168776332241266,0.292311015483596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744323423456331,3.06923946576125,2.52594084989766,0,1.02341449813341,0.965123526861645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0,0.195551382734803,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0.76280561296425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0.994581110581374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3196288626764,0.485710993059139,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.09194519983426,0,1.29787968637137,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0.952257725854961,0,0,0,0.12729431655633,0.808468755832877,0.217716747896961,0.684466602170562,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0|short_description=p@chr6:159660765..159660776,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C4579 | |||
|description=CAGE_peak_at_chr6:159660765..159660776,+ | |||
|id=chr6:159660765..159660776,+ | |||
|ontology_enrichment_celltype=CL:0002580!9.38e-14!3;CL:0002617!5.26e-09!2;CL:0000057!5.77e-09!75;CL:0002334!7.85e-09!12;CL:0000135!8.13e-07!3;CL:0000386!8.13e-07!3;CL:0000388!8.13e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002580;8.74e-45;3!CL:0000135;1.09e-44;3!CL:0000388;1.09e-44;3!CL:0002334;2.13e-25;12!CL:0002579;3.06e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,7.81e-45,3;CL:0000135,9.77e-45,3;CL:0000388,9.77e-45,3;CL:0002334,2.14e-25,12;CL:0002579,3.24e-12,3;CL:0000057,2.52e-11,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000310!2.39e-10!10;UBERON:0001443!2.24e-09!11;UBERON:0000341!3.65e-09!2;UBERON:0000043!8.13e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;1.09e-44;3!UBERON:0000043;1.09e-44;3!UBERON:0007845;1.09e-44;3!UBERON:0000310;2.94e-14;10!UBERON:0001443;4.66e-13;11!UBERON:0003688;9.23e-07;6!UBERON:0002358;9.23e-07;6!UBERON:0003684;9.23e-07;6!UBERON:0001178;9.23e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,9.77e-45,3;UBERON:0000043,9.77e-45,3;UBERON:0007845,9.77e-45,3;UBERON:0000310,2.84e-14,10;UBERON:0001443,4.52e-13,11;UBERON:0003688,9.49e-07,6;UBERON:0002358,9.49e-07,6;UBERON:0003684,9.49e-07,6;UBERON:0001178,9.49e-07,6 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.579386075843295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.989067717114227,0,0,0,0,0,0,0.612975591598039,0.45071417671979,0,0.179389635688862,0.213557388818567,0,0,0,0.257640540045629,0,0.168776332241266,0.292311015483596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744323423456331,3.06923946576125,2.52594084989766,0,1.02341449813341,0.965123526861645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0,0.195551382734803,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0.76280561296425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0.994581110581374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3196288626764,0.485710993059139,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.09194519983426,0,1.29787968637137,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0.952257725854961,0,0,0,0.12729431655633,0.808468755832877,0.217716747896961,0.684466602170562,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p@chr6:159660765..159660776,+ | |||
}} |
Revision as of 19:05, 13 September 2013
Short description: | p@chr6:159660765..159660776, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:159660765..159660776, + |
Coexpression cluster: | C4579_Preadipocyte_Fibroblast_skeletal_skin_osteosarcoma_Chondrocyte_leiomyoblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 7.81e-45 | 3 |
fibrocyte | 9.77e-45 | 3 |
tendon cell | 9.77e-45 | 3 |
preadipocyte | 2.14e-25 | 12 |
omentum preadipocyte | 3.24e-12 | 3 |
fibroblast | 2.52e-11 | 76 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 9.77e-45 | 3 |
tendon | 9.77e-45 | 3 |
regular connective tissue | 9.77e-45 | 3 |
breast | 2.84e-14 | 10 |
chest | 4.52e-13 | 11 |
omentum | 9.49e-07 | 6 |
peritoneum | 9.49e-07 | 6 |
abdominal cavity | 9.49e-07 | 6 |
visceral peritoneum | 9.49e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.