FFCP PHASE1:Mm9::chr1:25886871..25886886,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=210933|HGNC=|MCL_coexpression_id=1|UniProt=G3XA05,Q6ZQ96,Q8BJ13,Q8K0A3|association_with_transcript=-319bp_to_ENSMUST00000151309,NM_175642,uc011wis.1_5end|description=CAGE_peak_8_at_Bai3_5end|id=chr1:25886871..25886886,-|ontology_enrichment_celltype=CL:0000117!5.45e-18!23;CL:0000337!5.45e-18!23;CL:0000540!4.62e-13!33;CL:0000047!4.62e-13!33;CL:0000031!4.62e-13!33;CL:0000404!4.62e-13!33;CL:0002319!2.07e-12!43;CL:0000221!6.85e-12!44;CL:0000133!6.85e-12!44;CL:0000393!1.12e-09!39;CL:0000211!1.12e-09!39;CL:0000055!2.96e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.11e-22,23;CL:0000337,1.11e-22,23;CL:0000540,8.80e-15,33;CL:0000047,8.80e-15,33;CL:0000031,8.80e-15,33;CL:0000404,8.80e-15,33;CL:0000393,5.40e-12,39;CL:0000211,5.40e-12,39;CL:0002319,1.43e-10,43;CL:0000221,2.96e-10,44;CL:0000133,2.96e-10,44;CL:0002614,4.51e-09,3;CL:0000120,7.80e-09,3;CL:0002612,1.34e-08,3;CL:0002610,3.63e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.93e-34!71;UBERON:0003075!1.93e-34!71;UBERON:0007284!1.93e-34!71;UBERON:0001017!6.33e-34!73;UBERON:0005743!6.33e-34!73;UBERON:0000073!2.03e-32!75;UBERON:0001016!2.03e-32!75;UBERON:0000033!1.14e-31!63;UBERON:0001049!1.16e-30!52;UBERON:0005068!1.16e-30!52;UBERON:0006241!1.16e-30!52;UBERON:0007135!1.16e-30!52;UBERON:0004121!2.33e-30!102;UBERON:0000924!2.33e-30!102;UBERON:0006601!2.33e-30!102;UBERON:0000955!2.05e-28!50;UBERON:0006238!2.05e-28!50;UBERON:0002616!1.03e-27!49;UBERON:0003056!1.85e-26!49;UBERON:0002020!1.41e-24!34;UBERON:0003080!1.83e-21!40;UBERON:0002780!1.25e-20!39;UBERON:0001890!1.25e-20!39;UBERON:0006240!1.25e-20!39;UBERON:0002791!7.55e-20!29;UBERON:0003528!7.55e-20!29;UBERON:0001893!7.55e-20!29;UBERON:0007811!1.19e-18!86;UBERON:0000153!6.43e-17!94;UBERON:0000956!1.55e-13!21;UBERON:0001869!1.55e-13!21;UBERON:0000203!1.55e-13!21;UBERON:0002619!8.89e-11!17;UBERON:0002021!3.13e-10!10;UBERON:0000411!3.13e-10!10;UBERON:0001950!3.13e-10!10;UBERON:0003076!1.34e-09!12;UBERON:0003057!1.34e-09!12;UBERON:0002420!1.47e-07!8;UBERON:0007245!1.47e-07!8;UBERON:0010009!1.47e-07!8;UBERON:0010011!1.47e-07!8;UBERON:0000454!1.47e-07!8;UBERON:0002240!9.63e-07!6;UBERON:0005174!9.63e-07!6;UBERON:0001137!9.63e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.80e-35,54;UBERON:0001017,2.69e-33,73;UBERON:0001016,3.06e-32,75;UBERON:0001049,2.35e-31,52;UBERON:0005068,2.35e-31,52;UBERON:0006241,2.35e-31,52;UBERON:0007135,2.35e-31,52;UBERON:0002020,7.56e-30,34;UBERON:0002346,1.67e-26,64;UBERON:0003075,1.67e-26,64;UBERON:0007284,1.67e-26,64;UBERON:0004121,6.38e-26,95;UBERON:0000924,6.38e-26,95;UBERON:0006601,6.38e-26,95;UBERON:0010371,1.68e-22,73;UBERON:0002616,1.12e-20,46;UBERON:0002021,3.33e-20,10;UBERON:0000411,3.33e-20,10;UBERON:0001950,3.33e-20,10;UBERON:0000955,3.89e-20,47;UBERON:0006238,3.89e-20,47;UBERON:0003528,6.41e-20,29;UBERON:0002791,6.41e-20,29;UBERON:0001893,6.41e-20,29;UBERON:0003080,3.34e-17,40;UBERON:0010314,1.29e-16,92;UBERON:0003076,2.09e-16,12;UBERON:0003057,2.09e-16,12;UBERON:0002780,9.97e-16,39;UBERON:0001890,9.97e-16,39;UBERON:0006240,9.97e-16,39;UBERON:0002240,4.27e-15,6;UBERON:0005174,4.27e-15,6;UBERON:0001137,4.27e-15,6;UBERON:0003056,5.12e-15,49;UBERON:0002619,4.90e-14,17;UBERON:0000956,2.80e-13,21;UBERON:0001869,2.80e-13,21;UBERON:0000203,2.80e-13,21;UBERON:0001948,3.86e-13,5;UBERON:0002315,3.86e-13,5;UBERON:0000025,4.05e-11,114;UBERON:0002950,4.34e-11,4;UBERON:0001891,4.34e-11,4;UBERON:0009616,4.34e-11,4;UBERON:0010286,4.34e-11,4;UBERON:0004111,5.26e-10,122;UBERON:0002038,4.51e-09,3;UBERON:0009663,4.51e-09,3;UBERON:0009661,4.51e-09,3;UBERON:0000125,4.51e-09,3;UBERON:0002308,4.51e-09,3;UBERON:0002257,1.34e-08,3;UBERON:0011216,1.94e-08,194;UBERON:0004684,3.63e-08,3;UBERON:0002275,3.63e-08,3;UBERON:0002420,6.20e-08,8;UBERON:0007245,6.20e-08,8;UBERON:0010009,6.20e-08,8;UBERON:0010011,6.20e-08,8;UBERON:0000454,6.20e-08,8|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,2.02316460859598,2.64495489636016,2.53532561402472,0,0,0,0,0,0.599200221036809,0.768436610643109,0.414758449233911,0.945041568321835,0.841299845405528,2.57085885963423,1.54607978666129,0.734944795289724,0.670918297127655,0,1.10115880999389,2.042997409363,2.15049146558741,0.527545150920775,1.00636407962651,0.52091337055676,2.51264699101243,2.8138130501584,2.59757021220577,3.83017161115768,1.99320353118744,1.67759501242771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0.301445281105245,0.352766121407114,0,0,0,0,0,0,0,0,2.92780797011547,5.44561437714983,0.255457055208591,0,0,0,1.49790639404823,1.37250180845588,0.753926112677186,1.73824320192276,2.04572365864264,0.83115217823824,1.1356888414743,0.101839363850316,0,0,0.210441855886474,0.130120442962704,0.459804208866946,0.180062129805349,0.452114453507145,0.476255494059295,0.768682321709099,0.749613796477831,1.81092359517311,0,0,0.175951124163949,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94405927989778,0.308713837137853,0,0,0.213288250535234,0,0,0.201683524623343,0,0.190225626112559,0,0,0,0,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44495530989013,0.937693492737625,0,0,0,0.390438744296638,0.215423397732799,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.258717367565509,0,0.354680467284547,0.356737635204141,0.164549020602121,0,0,0,0,0,0,0,0,0,0,1.29797711407357,0,0.619160603889667,0,0,0,0,0,0,0,0,0.158167996790568,0.609958401380546,0,0,0,0,0.165306911450672,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,1.84130094602871,4.01026859407578,3.95262319390481,0.685082519770642,1.5107877947794,2.02506750069542,1.80128481289688,2.26571204492102,3.10656187051092,0,0.798049746802062,0.512200817262403,0,0,0,0.44449345560323,0.206035057238894,0,0,0,0,0.187283014939765,0.128050304809739,0.402048282689293,0.476293691283074,0.231768651889711,0.38581844092741,0.412085900803307,0.588795680537589,0,0.177475806159338,0.715308569841963,0,0.470546902076653,0.0846146078916765,0,0,0,0.561142271657738,0.237270036248348,0.29551344712669,0,0.154936841185966,0,0.749431733813838,0.233931608445408,0.214871054048298,0.191288332068843,0,0|short_description=p8@Bai3}} | ||
|EntrezGene=210933 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=G3XA05,Q6ZQ96,Q8BJ13,Q8K0A3 | |||
|association_with_transcript=-319bp_to_ENSMUST00000151309,NM_175642,uc011wis.1_5end | |||
|description=CAGE_peak_8_at_Bai3_5end | |||
|id=chr1:25886871..25886886,- | |||
|ontology_enrichment_celltype=CL:0000117!5.45e-18!23;CL:0000337!5.45e-18!23;CL:0000540!4.62e-13!33;CL:0000047!4.62e-13!33;CL:0000031!4.62e-13!33;CL:0000404!4.62e-13!33;CL:0002319!2.07e-12!43;CL:0000221!6.85e-12!44;CL:0000133!6.85e-12!44;CL:0000393!1.12e-09!39;CL:0000211!1.12e-09!39;CL:0000055!2.96e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.11e-22,23;CL:0000337,1.11e-22,23;CL:0000540,8.80e-15,33;CL:0000047,8.80e-15,33;CL:0000031,8.80e-15,33;CL:0000404,8.80e-15,33;CL:0000393,5.40e-12,39;CL:0000211,5.40e-12,39;CL:0002319,1.43e-10,43;CL:0000221,2.96e-10,44;CL:0000133,2.96e-10,44;CL:0002614,4.51e-09,3;CL:0000120,7.80e-09,3;CL:0002612,1.34e-08,3;CL:0002610,3.63e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.93e-34!71;UBERON:0003075!1.93e-34!71;UBERON:0007284!1.93e-34!71;UBERON:0001017!6.33e-34!73;UBERON:0005743!6.33e-34!73;UBERON:0000073!2.03e-32!75;UBERON:0001016!2.03e-32!75;UBERON:0000033!1.14e-31!63;UBERON:0001049!1.16e-30!52;UBERON:0005068!1.16e-30!52;UBERON:0006241!1.16e-30!52;UBERON:0007135!1.16e-30!52;UBERON:0004121!2.33e-30!102;UBERON:0000924!2.33e-30!102;UBERON:0006601!2.33e-30!102;UBERON:0000955!2.05e-28!50;UBERON:0006238!2.05e-28!50;UBERON:0002616!1.03e-27!49;UBERON:0003056!1.85e-26!49;UBERON:0002020!1.41e-24!34;UBERON:0003080!1.83e-21!40;UBERON:0002780!1.25e-20!39;UBERON:0001890!1.25e-20!39;UBERON:0006240!1.25e-20!39;UBERON:0002791!7.55e-20!29;UBERON:0003528!7.55e-20!29;UBERON:0001893!7.55e-20!29;UBERON:0007811!1.19e-18!86;UBERON:0000153!6.43e-17!94;UBERON:0000956!1.55e-13!21;UBERON:0001869!1.55e-13!21;UBERON:0000203!1.55e-13!21;UBERON:0002619!8.89e-11!17;UBERON:0002021!3.13e-10!10;UBERON:0000411!3.13e-10!10;UBERON:0001950!3.13e-10!10;UBERON:0003076!1.34e-09!12;UBERON:0003057!1.34e-09!12;UBERON:0002420!1.47e-07!8;UBERON:0007245!1.47e-07!8;UBERON:0010009!1.47e-07!8;UBERON:0010011!1.47e-07!8;UBERON:0000454!1.47e-07!8;UBERON:0002240!9.63e-07!6;UBERON:0005174!9.63e-07!6;UBERON:0001137!9.63e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.80e-35,54;UBERON:0001017,2.69e-33,73;UBERON:0001016,3.06e-32,75;UBERON:0001049,2.35e-31,52;UBERON:0005068,2.35e-31,52;UBERON:0006241,2.35e-31,52;UBERON:0007135,2.35e-31,52;UBERON:0002020,7.56e-30,34;UBERON:0002346,1.67e-26,64;UBERON:0003075,1.67e-26,64;UBERON:0007284,1.67e-26,64;UBERON:0004121,6.38e-26,95;UBERON:0000924,6.38e-26,95;UBERON:0006601,6.38e-26,95;UBERON:0010371,1.68e-22,73;UBERON:0002616,1.12e-20,46;UBERON:0002021,3.33e-20,10;UBERON:0000411,3.33e-20,10;UBERON:0001950,3.33e-20,10;UBERON:0000955,3.89e-20,47;UBERON:0006238,3.89e-20,47;UBERON:0003528,6.41e-20,29;UBERON:0002791,6.41e-20,29;UBERON:0001893,6.41e-20,29;UBERON:0003080,3.34e-17,40;UBERON:0010314,1.29e-16,92;UBERON:0003076,2.09e-16,12;UBERON:0003057,2.09e-16,12;UBERON:0002780,9.97e-16,39;UBERON:0001890,9.97e-16,39;UBERON:0006240,9.97e-16,39;UBERON:0002240,4.27e-15,6;UBERON:0005174,4.27e-15,6;UBERON:0001137,4.27e-15,6;UBERON:0003056,5.12e-15,49;UBERON:0002619,4.90e-14,17;UBERON:0000956,2.80e-13,21;UBERON:0001869,2.80e-13,21;UBERON:0000203,2.80e-13,21;UBERON:0001948,3.86e-13,5;UBERON:0002315,3.86e-13,5;UBERON:0000025,4.05e-11,114;UBERON:0002950,4.34e-11,4;UBERON:0001891,4.34e-11,4;UBERON:0009616,4.34e-11,4;UBERON:0010286,4.34e-11,4;UBERON:0004111,5.26e-10,122;UBERON:0002038,4.51e-09,3;UBERON:0009663,4.51e-09,3;UBERON:0009661,4.51e-09,3;UBERON:0000125,4.51e-09,3;UBERON:0002308,4.51e-09,3;UBERON:0002257,1.34e-08,3;UBERON:0011216,1.94e-08,194;UBERON:0004684,3.63e-08,3;UBERON:0002275,3.63e-08,3;UBERON:0002420,6.20e-08,8;UBERON:0007245,6.20e-08,8;UBERON:0010009,6.20e-08,8;UBERON:0010011,6.20e-08,8;UBERON:0000454,6.20e-08,8 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,2.02316460859598,2.64495489636016,2.53532561402472,0,0,0,0,0,0.599200221036809,0.768436610643109,0.414758449233911,0.945041568321835,0.841299845405528,2.57085885963423,1.54607978666129,0.734944795289724,0.670918297127655,0,1.10115880999389,2.042997409363,2.15049146558741,0.527545150920775,1.00636407962651,0.52091337055676,2.51264699101243,2.8138130501584,2.59757021220577,3.83017161115768,1.99320353118744,1.67759501242771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0.301445281105245,0.352766121407114,0,0,0,0,0,0,0,0,2.92780797011547,5.44561437714983,0.255457055208591,0,0,0,1.49790639404823,1.37250180845588,0.753926112677186,1.73824320192276,2.04572365864264,0.83115217823824,1.1356888414743,0.101839363850316,0,0,0.210441855886474,0.130120442962704,0.459804208866946,0.180062129805349,0.452114453507145,0.476255494059295,0.768682321709099,0.749613796477831,1.81092359517311,0,0,0.175951124163949,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94405927989778,0.308713837137853,0,0,0.213288250535234,0,0,0.201683524623343,0,0.190225626112559,0,0,0,0,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44495530989013,0.937693492737625,0,0,0,0.390438744296638,0.215423397732799,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.258717367565509,0,0.354680467284547,0.356737635204141,0.164549020602121,0,0,0,0,0,0,0,0,0,0,1.29797711407357,0,0.619160603889667,0,0,0,0,0,0,0,0,0.158167996790568,0.609958401380546,0,0,0,0,0.165306911450672,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,1.84130094602871,4.01026859407578,3.95262319390481,0.685082519770642,1.5107877947794,2.02506750069542,1.80128481289688,2.26571204492102,3.10656187051092,0,0.798049746802062,0.512200817262403,0,0,0,0.44449345560323,0.206035057238894,0,0,0,0,0.187283014939765,0.128050304809739,0.402048282689293,0.476293691283074,0.231768651889711,0.38581844092741,0.412085900803307,0.588795680537589,0,0.177475806159338,0.715308569841963,0,0.470546902076653,0.0846146078916765,0,0,0,0.561142271657738,0.237270036248348,0.29551344712669,0,0.154936841185966,0,0.749431733813838,0.233931608445408,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p8@Bai3 | |||
}} |
Revision as of 20:13, 13 September 2013
Short description: | p8@Bai3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Bai3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -319bp_to_ENSMUST00000151309, NM_175642, uc011wis.1_5end |
EntrezGene: | Bai3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.11e-22 | 23 |
neuroblast (sensu Vertebrata) | 1.11e-22 | 23 |
neuron | 8.80e-15 | 33 |
neuronal stem cell | 8.80e-15 | 33 |
neuroblast | 8.80e-15 | 33 |
electrically signaling cell | 8.80e-15 | 33 |
electrically responsive cell | 5.40e-12 | 39 |
electrically active cell | 5.40e-12 | 39 |
neural cell | 1.43e-10 | 43 |
ectodermal cell | 2.96e-10 | 44 |
neurectodermal cell | 2.96e-10 | 44 |
neuron of the substantia nigra | 4.51e-09 | 3 |
granule cell | 7.80e-09 | 3 |
neuron of the ventral spinal cord | 1.34e-08 | 3 |
raphe nuclei neuron | 3.63e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.