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FFCP PHASE1:Mm9::chr2:165818178..165818187,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=17979|HGNC=|UniProt=Q05BA5,E9QPU8,A5D6Q2|association_with_transcript=41bp_to_ENSMUST00000088095,ENSMUST00000099082,NM_008679,uc008nyi.2_5end|description=CAGE_peak_3_at_Ncoa3_5end|id=chr2:165818178..165818187,+|ontology_enrichment_celltype=CL:0000838!5.88e-08!12;CL:0000542!1.44e-07!13;CL:0000051!1.44e-07!13;CL:0000084!2.52e-07!11;CL:0000827!2.52e-07!11;CL:0000791!5.14e-07!9;CL:0000789!5.14e-07!9;CL:0002420!5.14e-07!9;CL:0002419!5.14e-07!9;CL:0000790!5.14e-07!9|ontology_enrichment_celltype_v019_2=CL:0000838,8.23e-09,12;CL:0000542,2.26e-08,13;CL:0000051,2.26e-08,13;CL:0000084,4.27e-08,11;CL:0000827,4.27e-08,11;CL:0000791,9.56e-08,9;CL:0000789,9.56e-08,9;CL:0002420,9.56e-08,9;CL:0002419,9.56e-08,9;CL:0000790,9.56e-08,9;CL:0000738,2.96e-07,17;CL:0002087,2.96e-07,17;CL:0000624,5.32e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.33e-08!48;UBERON:0006562!2.22e-08!24;UBERON:0001557!2.22e-08!24;UBERON:0001042!2.22e-08!24;UBERON:0008814!2.22e-08!24;UBERON:0009145!2.22e-08!24;UBERON:0004177!2.61e-08!29;UBERON:0002390!4.54e-08!45;UBERON:0003061!4.54e-08!45;UBERON:0002370!5.57e-08!23;UBERON:0000974!5.57e-08!23;UBERON:0004807!5.57e-08!23;UBERON:0005058!5.57e-08!23;UBERON:0003351!5.57e-08!23;UBERON:0009113!5.57e-08!23;UBERON:0003295!5.57e-08!23;UBERON:0009722!5.57e-08!23;UBERON:0005562!5.57e-08!23;UBERON:0007690!5.57e-08!23;UBERON:0003408!2.38e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.95e-09,48;UBERON:0002405,1.95e-09,48;UBERON:0006562,3.68e-09,24;UBERON:0001557,3.68e-09,24;UBERON:0001042,3.68e-09,24;UBERON:0008814,3.68e-09,24;UBERON:0009145,3.68e-09,24;UBERON:0002390,6.21e-09,45;UBERON:0003061,6.21e-09,45;UBERON:0004177,6.44e-09,29;UBERON:0005057,6.44e-09,29;UBERON:0002370,1.04e-08,23;UBERON:0000974,1.04e-08,23;UBERON:0004807,1.04e-08,23;UBERON:0005058,1.04e-08,23;UBERON:0003351,1.04e-08,23;UBERON:0009113,1.04e-08,23;UBERON:0003295,1.04e-08,23;UBERON:0009722,1.04e-08,23;UBERON:0005562,1.04e-08,23;UBERON:0007690,1.04e-08,23;UBERON:0000077,2.12e-08,35;UBERON:0003408,5.85e-08,24;UBERON:0007811,1.12e-07,36;UBERON:0000153,1.34e-07,43;UBERON:0000072,4.43e-07,27|phase1_expression=1.92178616525753,2.44282785347553,3.18499467572675,1.81478526784098,1.50268718983904,1.34303417529512,0.467225281191051,11.4919757863003,12.3894075493467,16.1504523162175,2.05461561870606,3.5099749957948,4.45121897821135,5.94458736449182,0.666219523631325,0.607425802169478,0.699561878128147,4.57420139769445,6.85572168028694,5.94145512517242,1.19060606211498,1.48936426801328,2.08959831311148,2.3998863419011,0.68822784320151,0.57423196411502,1.29228598847722,1.07735616342945,0.760093677825496,1.26015064879965,0,0.635030673459631,0,0,0.866554859253824,0,0.408338712524738,0.837063261473815,3.1253413780952,2.09409497589519,2.94115744015507,2.04913645487534,3.39857247121808,0.881277725829041,0.811015449756117,0.183546752161682,0,0.218025156380447,0,0.388859798148567,0.55994568650145,0,5.70460860596304,7.25362142011344,7.05796978199174,2.31533492432352,2.86533439938757,1.54701627683233,1.21389876515759,1.5869729378161,0.633831403506179,0.338844532069132,0,1.7997994345628,0,2.1314403448383,0.299600110518405,0.768436610643109,0.622137673850866,0.270011876663381,0.630974884054146,1.14260393761521,0.883474163806454,0.244981598429908,0.479227355091182,0,0,2.042997409363,0.614426133024974,2.37395317914349,1.64677758484337,0,0,0.56276261003168,0.61119299110724,0.589257170947335,0.854230084794618,1.1183966749518,0.605809546665472,0.604572480854284,7.8263411949453,5.16254326188832,0,0.539703191637817,0,0,0.421333260395256,0.340860645156116,0,0,1.26759077799012,1.28326477414318,5.09610479413291,0,0.649473123033642,0.253359865475099,0.505524445014783,1.25602267690966,7.50919862576798,1.33597925158342,0.173485326766136,0,0.922461989024234,0.452167921657868,1.17588707135705,0.753999547978053,0.988779870937496,1.73519228303894,2.65383165584962,0.647067399789637,1.10420759230197,0.969750506270444,0,0.585561594023094,1.25668024088073,1.02182822083437,2.99537811264801,2.39961092397363,2.03312363316904,0.599162557619291,0.915001205637253,1.50785222535437,1.91206752211504,2.81287003063364,1.0389402227978,1.62241263067758,1.42575109390443,0.870848794270651,3.0326731012041,2.10441855886474,0.260240885925407,0.689706313300419,1.62055916824814,0.90422890701429,1.56483948048054,1.0249097622788,1.03071897015702,1.81092359517311,1.07783996466421,1.13463648100692,1.58356011747554,1.31517439456545,2.22437799380478,0.696504333044333,1.02891068203972,1.19420560091096,3.51106593656617,1.80143534980301,0.284163499395593,0.207125772535502,0.469052119962192,0.900310307305074,0.946978942340841,0.196764231747404,0.771335564436891,0.465067889500816,0.268273401399619,1.16765342367169,0.16455984991348,0.820837320395476,1.37816976227955,0.730999937126662,0.878200461164203,1.20785776884335,1.26173969138476,1.13195073617213,1.32167513193519,0.264450566663544,1.06644125267617,1.16118335930219,1.1598071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|EntrezGene=17979
|HGNC=
|UniProt=Q05BA5,E9QPU8,A5D6Q2
|association_with_transcript=41bp_to_ENSMUST00000088095,ENSMUST00000099082,NM_008679,uc008nyi.2_5end
|description=CAGE_peak_3_at_Ncoa3_5end
|id=chr2:165818178..165818187,+
|ontology_enrichment_celltype=CL:0000838!5.88e-08!12;CL:0000542!1.44e-07!13;CL:0000051!1.44e-07!13;CL:0000084!2.52e-07!11;CL:0000827!2.52e-07!11;CL:0000791!5.14e-07!9;CL:0000789!5.14e-07!9;CL:0002420!5.14e-07!9;CL:0002419!5.14e-07!9;CL:0000790!5.14e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000838,8.23e-09,12;CL:0000542,2.26e-08,13;CL:0000051,2.26e-08,13;CL:0000084,4.27e-08,11;CL:0000827,4.27e-08,11;CL:0000791,9.56e-08,9;CL:0000789,9.56e-08,9;CL:0002420,9.56e-08,9;CL:0002419,9.56e-08,9;CL:0000790,9.56e-08,9;CL:0000738,2.96e-07,17;CL:0002087,2.96e-07,17;CL:0000624,5.32e-07,8
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002193!1.33e-08!48;UBERON:0006562!2.22e-08!24;UBERON:0001557!2.22e-08!24;UBERON:0001042!2.22e-08!24;UBERON:0008814!2.22e-08!24;UBERON:0009145!2.22e-08!24;UBERON:0004177!2.61e-08!29;UBERON:0002390!4.54e-08!45;UBERON:0003061!4.54e-08!45;UBERON:0002370!5.57e-08!23;UBERON:0000974!5.57e-08!23;UBERON:0004807!5.57e-08!23;UBERON:0005058!5.57e-08!23;UBERON:0003351!5.57e-08!23;UBERON:0009113!5.57e-08!23;UBERON:0003295!5.57e-08!23;UBERON:0009722!5.57e-08!23;UBERON:0005562!5.57e-08!23;UBERON:0007690!5.57e-08!23;UBERON:0003408!2.38e-07!24
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.95e-09,48;UBERON:0002405,1.95e-09,48;UBERON:0006562,3.68e-09,24;UBERON:0001557,3.68e-09,24;UBERON:0001042,3.68e-09,24;UBERON:0008814,3.68e-09,24;UBERON:0009145,3.68e-09,24;UBERON:0002390,6.21e-09,45;UBERON:0003061,6.21e-09,45;UBERON:0004177,6.44e-09,29;UBERON:0005057,6.44e-09,29;UBERON:0002370,1.04e-08,23;UBERON:0000974,1.04e-08,23;UBERON:0004807,1.04e-08,23;UBERON:0005058,1.04e-08,23;UBERON:0003351,1.04e-08,23;UBERON:0009113,1.04e-08,23;UBERON:0003295,1.04e-08,23;UBERON:0009722,1.04e-08,23;UBERON:0005562,1.04e-08,23;UBERON:0007690,1.04e-08,23;UBERON:0000077,2.12e-08,35;UBERON:0003408,5.85e-08,24;UBERON:0007811,1.12e-07,36;UBERON:0000153,1.34e-07,43;UBERON:0000072,4.43e-07,27
|phase1_expression=1.92178616525753,2.44282785347553,3.18499467572675,1.81478526784098,1.50268718983904,1.34303417529512,0.467225281191051,11.4919757863003,12.3894075493467,16.1504523162175,2.05461561870606,3.5099749957948,4.45121897821135,5.94458736449182,0.666219523631325,0.607425802169478,0.699561878128147,4.57420139769445,6.85572168028694,5.94145512517242,1.19060606211498,1.48936426801328,2.08959831311148,2.3998863419011,0.68822784320151,0.57423196411502,1.29228598847722,1.07735616342945,0.760093677825496,1.26015064879965,0,0.635030673459631,0,0,0.866554859253824,0,0.408338712524738,0.837063261473815,3.1253413780952,2.09409497589519,2.94115744015507,2.04913645487534,3.39857247121808,0.881277725829041,0.811015449756117,0.183546752161682,0,0.218025156380447,0,0.388859798148567,0.55994568650145,0,5.70460860596304,7.25362142011344,7.05796978199174,2.31533492432352,2.86533439938757,1.54701627683233,1.21389876515759,1.5869729378161,0.633831403506179,0.338844532069132,0,1.7997994345628,0,2.1314403448383,0.299600110518405,0.768436610643109,0.622137673850866,0.270011876663381,0.630974884054146,1.14260393761521,0.883474163806454,0.244981598429908,0.479227355091182,0,0,2.042997409363,0.614426133024974,2.37395317914349,1.64677758484337,0,0,0.56276261003168,0.61119299110724,0.589257170947335,0.854230084794618,1.1183966749518,0.605809546665472,0.604572480854284,7.8263411949453,5.16254326188832,0,0.539703191637817,0,0,0.421333260395256,0.340860645156116,0,0,1.26759077799012,1.28326477414318,5.09610479413291,0,0.649473123033642,0.253359865475099,0.505524445014783,1.25602267690966,7.50919862576798,1.33597925158342,0.173485326766136,0,0.922461989024234,0.452167921657868,1.17588707135705,0.753999547978053,0.988779870937496,1.73519228303894,2.65383165584962,0.647067399789637,1.10420759230197,0.969750506270444,0,0.585561594023094,1.25668024088073,1.02182822083437,2.99537811264801,2.39961092397363,2.03312363316904,0.599162557619291,0.915001205637253,1.50785222535437,1.91206752211504,2.81287003063364,1.0389402227978,1.62241263067758,1.42575109390443,0.870848794270651,3.0326731012041,2.10441855886474,0.260240885925407,0.689706313300419,1.62055916824814,0.90422890701429,1.56483948048054,1.0249097622788,1.03071897015702,1.81092359517311,1.07783996466421,1.13463648100692,1.58356011747554,1.31517439456545,2.22437799380478,0.696504333044333,1.02891068203972,1.19420560091096,3.51106593656617,1.80143534980301,0.284163499395593,0.207125772535502,0.469052119962192,0.900310307305074,0.946978942340841,0.196764231747404,0.771335564436891,0.465067889500816,0.268273401399619,1.16765342367169,0.16455984991348,0.820837320395476,1.37816976227955,0.730999937126662,0.878200461164203,1.20785776884335,1.26173969138476,1.13195073617213,1.32167513193519,0.264450566663544,1.06644125267617,1.16118335930219,1.15980715189884,0.403367049246685,0.444756087689741,0.951128130562796,0,0.494096864172033,0.754005626400808,0.198956472041151,1.36474860983384,0.898819408654221,0.648414149624083,0.995706366271836,1.51734320762465,1.71372768914593,0,1.4255592949172,1.35766741017338,1.68325967736765,1.7706230394792,1.91893192373483,1.72698600625512,1.60416313098341,0,0.83422552858047,0.786235980452812,0.899448449539415,0,0.482354319504834,1.01850340712568,0.863088412352432,0.162135226775035,0.274561413188081,0,1.48856379067401,1.87222603868736,0.757736633841335,0.896987067609561,0.482443521363367,1.47802552133284,1.32643988239339,0.488894929326078,0.848725428875941,0.469380496577004,0.670025029767263,0.714130922658041,1.75620283072019,0.945810864637146,1.10732344824387,1.59454768657487,1.96635977658886,1.72684981865896,1.01254341007058,4.52373851817817,1.63171705145613,2.95058563811422,2.48343071674259,0.80275294993896,1.64096361229084,0.327869890753351,1.00988370881749,0.94652465824877,0.780877488593277,0.861693590931196,0.716906393857656,1.33679204449436,1.41538265394416,2.02405350837447,0,1.97643888973262,1.92792789853084,0.851640511249612,1.24645922567079,1.14020871547503,1.31976098378028,0,0.728341908464944,0.906970670894253,0.565815239267694,0,0.614870295887855,1.03371317267288,1.45413491791002,0.356497378384721,1.26414703174326,1.05418608574999,2.06271086496374,0,1.26042765821917,0.776152102696527,1.28602221018955,1.06404140185364,1.24858172321449,0.493647061806363,0.913394847343798,0.938686832254841,1.69465656691056,0.882113592219848,2.4732937941222,1.77610869365496,1.20625849856312,1.90995750405018,2.46211349617592,1.7488850197791,0.927126510052548,2.05045056957423,1.23832120777933,0.740778109478847,1.88368457004691,2.05041341581538,1.14389086603261,2.20971958992012,1.81936888020755,2.62579950228405,0,1.26534397432454,0.406638934253697,0.432021363287205,0.836353184057875,1.31017538247707,1.07891477107857,1.48776220305605,2.35580347785627,0.259229946583586,0.621339313086926,0.56369293868419,0.897099276263873,0.496375471371293,0.194451188344048,0.258319646955462,0.506868376472335,0.821500670520278,0.651021924219751,0.734015410979976,0.724752362478018,0.288030006257865,2.52808896502543,1.62180172232131,0.718976700153791,1.03936658382236,0.895133478337407,1.78813219303138,3.12508168751919,4.13530676088816,3.63479219813331,3.42930629947499,3.42809029465258,3.80085734885034,4.13710919053417,3.50630706544707,2.26730383615211,2.44184548711471,3.76798197759798,1.17519231454855,0.772758376128762,1.31377732815827,1.09890974560359,2.78678892802786,1.00314420807073,0.564751842617067,0,1.71868654031819,1.03111909406213,0,0.755393897389701,2.02506750069542,1.35096360967266,0.453142408984205,0.51776031175182,0.62272408550506,1.59609949360412,1.02440163452481,1.45864030240976,1.25767897576789,0.919217542250071,0.666740183404846,1.85431551515005,0.320919209591815,0.505394423527595,0.760437899670719,1.50901073108861,1.03005658216871,0.960377286073039,1.32101578597911,0.952587382566147,1.15884325944855,0.77163688185482,1.23625770240992,1.32479028120958,0.685738504770831,0.70990322463735,1.43061713968393,0.290692833264657,0.752875043322645,0.676916863133412,0.914639864363863,1.8414879800649,0.543216455383447,0,0.830445126869219,1.57607171800902,1.63692417267876,0.929621047115796,0.192906610981141,1.74867404556562,0.467863216890817,1.28922632428979,0.382576664137687,0.661774257358546,1.15933917810211
|short_description=p3@Ncoa3
}}

Revision as of 22:57, 13 September 2013

Short description:p3@Ncoa3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Ncoa3_5end
Coexpression cluster:NA
Association with transcript: 41bp_to_ENSMUST00000088095, ENSMUST00000099082, NM_008679, uc008nyi.2_5end
EntrezGene:Ncoa3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Ncoa3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.92
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.18
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.81
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E911.49
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E712.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F216.15
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.05
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.51
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.45
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E85.94
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A24.57
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A46.86
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.94
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.49
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.09
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.40
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B90.76
Ileum epithelium, pool2.CNhs13232.10253-104C11.26
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.40
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.81
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A25.70
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.25
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A17.06
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.32
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.87
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.04
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.37
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G37.83
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F75.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.26
accessory axillary lymph node, adult.CNhs10475.1063-29H97.51
adrenal gland, adult.CNhs10508.49-24D71.34
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H11.74
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.03
corpora quadrigemina, adult.CNhs10501.16-22A40.60
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F11.51
cortex, adult.CNhs10473.12-14D51.91
cortex, neonate N30.CNhs11107.1392-42F22.81
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B21.62
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.43
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B23.03
eyeball, adult.CNhs10484.31-12G42.10
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C61.56
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G81.03
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E21.58
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E72.22
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.80
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E31.17
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G11.38
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D21.21
hippocampus, adult.CNhs10478.13-16E81.26
hippocampus, neonate N00.CNhs11228.627-43G11.13
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F81.71
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G71.68
kidney, neonate N10.CNhs11206.758-6D51.77
kidney, neonate N20.CNhs11113.832-19I11.92
kidney, neonate N25.CNhs11122.1353-25F31.73
kidney, neonate N30.CNhs11203.1385-42H11.60
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.90
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B11.48
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C61.76
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E61.59
lung, neonate N20.CNhs11109.822-18A41.97
lung, neonate N25.CNhs11119.1359-25C71.73
lung, neonate N30.CNhs11133.1394-42H21.01
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H22.48
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A31.64
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G61.32
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G31.69
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C32.47
skin, neonate N00.CNhs11124.650-25G41.78
skin, neonate N03.CNhs11215.662-22H31.21
skin, neonate N06.CNhs11097.693-20I51.91
skin, neonate N10.CNhs11108.762-6C42.46
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G22.05
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D11.88
spleen, neonate N20.CNhs11112.824-19H12.05
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.21
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.63
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A91.49
stomach, neonate N25.CNhs11104.1355-25E42.36
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.73
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B52.53
thymus, embryo E14.CNhs11041.402-44I41.62
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C51.04
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G41.79
thymus, neonate N02.CNhs11181.1541-43F83.13
thymus, neonate N03.CNhs11137.2104-43C74.14
thymus, neonate N06.CNhs11197.681-26C43.63
thymus, neonate N07.CNhs11211.713-19D33.43
thymus, neonate N10.CNhs11194.748-24E43.43
thymus, neonate N20.CNhs11186.820-7A23.80
thymus, neonate N25.CNhs11125.1362-25G74.14
thymus, neonate N30.CNhs11132.1393-42G23.51
tongue, adult.CNhs10499.32-1B42.27
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.77
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.18
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F51.31
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D52.79
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B41.16





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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