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FFCP PHASE1:Mm9::chr2:179759608..179759619,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=241846|HGNC=|MCL_coexpression_id=22|UniProt=Q8CGC4,Q8BM41,Q4KL69|association_with_transcript=-72bp_to_ENSMUST00000055485,ENSMUST00000164284,NM_177727,uc008ohy.1_5end|description=CAGE_peak_2_at_Lsm14b_5end|id=chr2:179759608..179759619,+|ontology_enrichment_celltype=CL:0002319!2.50e-18!43;CL:0000221!7.51e-18!44;CL:0000133!7.51e-18!44;CL:0000540!4.98e-15!33;CL:0000047!4.98e-15!33;CL:0000031!4.98e-15!33;CL:0000404!4.98e-15!33;CL:0000055!2.19e-14!50;CL:0000117!1.84e-11!23;CL:0000337!1.84e-11!23;CL:0000393!2.11e-11!39;CL:0000211!2.11e-11!39;CL:0002321!7.10e-10!70;CL:0000220!7.10e-10!70|ontology_enrichment_celltype_v019_2=CL:0002319,4.05e-20,43;CL:0000221,3.56e-19,44;CL:0000133,3.56e-19,44;CL:0000540,8.20e-17,33;CL:0000047,8.20e-17,33;CL:0000031,8.20e-17,33;CL:0000404,8.20e-17,33;CL:0000393,9.31e-13,39;CL:0000211,9.31e-13,39;CL:0000117,9.62e-13,23;CL:0000337,9.62e-13,23;CL:0002321,5.00e-11,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.74e-12!75;UBERON:0001016!3.74e-12!75;UBERON:0001017!3.02e-11!73;UBERON:0005743!3.02e-11!73;UBERON:0004121!3.83e-11!102;UBERON:0000924!3.83e-11!102;UBERON:0006601!3.83e-11!102|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.67e-12,75;UBERON:0004121,2.27e-11,95;UBERON:0000924,2.27e-11,95;UBERON:0006601,2.27e-11,95;UBERON:0001017,7.18e-11,73;UBERON:0002346,4.48e-07,64;UBERON:0003075,4.48e-07,64;UBERON:0007284,4.48e-07,64|phase1_expression=1.12104192973356,1.04692622291808,1.81999695755814,1.81478526784098,0.500895729946347,1.51091344720701,0.934450562382103,0.258246646883153,0.281577444303333,0.468129052643987,0.513653904676515,0.0797721589953364,0.171200729931206,0.0874204024189974,0.333109761815663,0.202475267389826,0,0,0.137114433605739,0,1.61582251287033,0.794327609607082,1.30599894569468,0.47997726838022,0.45881856213434,1.14846392823004,0.430761996159075,0.861884930743556,0.190023419456374,0,0.443461021310609,0.635030673459631,1.84519436275371,0,0.577703239502549,0.498703936075477,0,0,0,0,0.588231488031014,0,0,0.125896817975577,0.202753862439029,0.734187008646726,3.12956537739216,2.39827672018491,0.878744730937887,1.36100929351998,2.51975558925653,5.75010257459886,0.838913030288682,0.725362142011344,0.672187598284928,2.05807548828758,0.573066879877513,0.515672092277442,12.5436205732951,7.93486468908049,15.2119536841483,2.37191172448392,0,0,0,0.7104801149461,3.59520132622086,9.22123932771731,12.2353742524004,15.7956947848078,14.9330722559481,2.57085885963423,3.09215957332259,13.4739879136449,10.2554653989513,18.3843757322004,2.20231761998777,1.65993539510744,1.99688493233117,13.1886287730194,9.05727671663856,9.37644067002168,1.95428099300967,0.56276261003168,2.44477196442896,5.30331453852602,3.70166370077668,7.45597783301202,5.2251073399897,4.45872204630035,0.579728977403356,0.860423876981386,0.679971333707751,1.61910957491345,0,0.448026887097336,1.26399978118577,0.170430322578058,0.779358013808606,0,0.845060518660083,1.28326477414318,0,0,3.68034769719064,2.28023878927589,2.52762222507392,0.68510327831436,0,0.445326417194474,1.04091196059682,0.913396434936424,0.922461989024234,1.20578112442098,0.823120949949934,0.502666365318702,0.494389935468748,0.144599356919912,0,0.970601099684455,1.10420759230197,1.45462575940567,0,1.46390398505774,0.83778682725382,1.02182822083437,0.11981512450592,0,0.127070227073065,0.898743836428936,0.915001205637253,3.64397621127307,0.521472960576829,0.255715457330331,1.0389402227978,1.29793010454206,1.32391173005411,0.995255764880744,1.51633655060205,0.841767423545896,4.16385417480652,3.44853156650209,5.76198815377118,2.71268672104287,2.04109497453984,2.8185018462667,5.24729657534481,0.258703370739016,8.40715172438085,5.48407632486676,2.46331573829528,2.84954452155847,0,1.74126083261083,1.4404749548556,1.39323986772945,0,0,0,1.86413195281952,1.40715635988658,1.2604344302271,2.3674473558521,1.37734962223183,1.54267112887378,0.930135779001631,1.07309360559848,1.28441876603886,1.48103864922132,0.656669856316381,1.86458261955468,2.77779976108131,1.09775057645525,1.34206418760372,0.630869845692382,2.16099685996497,0,0,5.97207101498655,1.85789337488351,1.80414445850931,0.605050573870028,0.667134131534611,0.760902504450237,0.474529061544512,0.164698954724011,0,0.397912944082302,0.58489226135736,0,0,0.199141273254367,4.1726938209678,1.37098215131675,4.50830942692322,0.814605311381257,1.55161989734101,0.98190147846446,0.885311519739602,1.47610147979602,0.784993639206874,0.987177311374404,1.1858105083486,1.00107063429656,0.982794975566015,0.449724224769707,0.811440485554012,0.482354319504834,0,0.287696137450811,0.648540907100142,0,1.43768206527355,0,0,0.757736633841335,0,0.482443521363367,0.184753190166605,3.03186258832776,3.25929952884052,1.69745085775188,0.704070744865506,1.00503754465089,1.19021820443007,0.195133647857799,0.315270288212382,0.44292937929755,0.637819074629948,0.491589944147214,0.690739927463582,0.433947175744535,0,0,0.983528546038072,1.10374698521893,0.8027529499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|EntrezGene=241846
|HGNC=
|MCL_coexpression_id=22
|UniProt=Q8CGC4,Q8BM41,Q4KL69
|association_with_transcript=-72bp_to_ENSMUST00000055485,ENSMUST00000164284,NM_177727,uc008ohy.1_5end
|description=CAGE_peak_2_at_Lsm14b_5end
|id=chr2:179759608..179759619,+
|ontology_enrichment_celltype=CL:0002319!2.50e-18!43;CL:0000221!7.51e-18!44;CL:0000133!7.51e-18!44;CL:0000540!4.98e-15!33;CL:0000047!4.98e-15!33;CL:0000031!4.98e-15!33;CL:0000404!4.98e-15!33;CL:0000055!2.19e-14!50;CL:0000117!1.84e-11!23;CL:0000337!1.84e-11!23;CL:0000393!2.11e-11!39;CL:0000211!2.11e-11!39;CL:0002321!7.10e-10!70;CL:0000220!7.10e-10!70
|ontology_enrichment_celltype_v019_2=CL:0002319,4.05e-20,43;CL:0000221,3.56e-19,44;CL:0000133,3.56e-19,44;CL:0000540,8.20e-17,33;CL:0000047,8.20e-17,33;CL:0000031,8.20e-17,33;CL:0000404,8.20e-17,33;CL:0000393,9.31e-13,39;CL:0000211,9.31e-13,39;CL:0000117,9.62e-13,23;CL:0000337,9.62e-13,23;CL:0002321,5.00e-11,70
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!3.74e-12!75;UBERON:0001016!3.74e-12!75;UBERON:0001017!3.02e-11!73;UBERON:0005743!3.02e-11!73;UBERON:0004121!3.83e-11!102;UBERON:0000924!3.83e-11!102;UBERON:0006601!3.83e-11!102
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.67e-12,75;UBERON:0004121,2.27e-11,95;UBERON:0000924,2.27e-11,95;UBERON:0006601,2.27e-11,95;UBERON:0001017,7.18e-11,73;UBERON:0002346,4.48e-07,64;UBERON:0003075,4.48e-07,64;UBERON:0007284,4.48e-07,64
|phase1_expression=1.12104192973356,1.04692622291808,1.81999695755814,1.81478526784098,0.500895729946347,1.51091344720701,0.934450562382103,0.258246646883153,0.281577444303333,0.468129052643987,0.513653904676515,0.0797721589953364,0.171200729931206,0.0874204024189974,0.333109761815663,0.202475267389826,0,0,0.137114433605739,0,1.61582251287033,0.794327609607082,1.30599894569468,0.47997726838022,0.45881856213434,1.14846392823004,0.430761996159075,0.861884930743556,0.190023419456374,0,0.443461021310609,0.635030673459631,1.84519436275371,0,0.577703239502549,0.498703936075477,0,0,0,0,0.588231488031014,0,0,0.125896817975577,0.202753862439029,0.734187008646726,3.12956537739216,2.39827672018491,0.878744730937887,1.36100929351998,2.51975558925653,5.75010257459886,0.838913030288682,0.725362142011344,0.672187598284928,2.05807548828758,0.573066879877513,0.515672092277442,12.5436205732951,7.93486468908049,15.2119536841483,2.37191172448392,0,0,0,0.7104801149461,3.59520132622086,9.22123932771731,12.2353742524004,15.7956947848078,14.9330722559481,2.57085885963423,3.09215957332259,13.4739879136449,10.2554653989513,18.3843757322004,2.20231761998777,1.65993539510744,1.99688493233117,13.1886287730194,9.05727671663856,9.37644067002168,1.95428099300967,0.56276261003168,2.44477196442896,5.30331453852602,3.70166370077668,7.45597783301202,5.2251073399897,4.45872204630035,0.579728977403356,0.860423876981386,0.679971333707751,1.61910957491345,0,0.448026887097336,1.26399978118577,0.170430322578058,0.779358013808606,0,0.845060518660083,1.28326477414318,0,0,3.68034769719064,2.28023878927589,2.52762222507392,0.68510327831436,0,0.445326417194474,1.04091196059682,0.913396434936424,0.922461989024234,1.20578112442098,0.823120949949934,0.502666365318702,0.494389935468748,0.144599356919912,0,0.970601099684455,1.10420759230197,1.45462575940567,0,1.46390398505774,0.83778682725382,1.02182822083437,0.11981512450592,0,0.127070227073065,0.898743836428936,0.915001205637253,3.64397621127307,0.521472960576829,0.255715457330331,1.0389402227978,1.29793010454206,1.32391173005411,0.995255764880744,1.51633655060205,0.841767423545896,4.16385417480652,3.44853156650209,5.76198815377118,2.71268672104287,2.04109497453984,2.8185018462667,5.24729657534481,0.258703370739016,8.40715172438085,5.48407632486676,2.46331573829528,2.84954452155847,0,1.74126083261083,1.4404749548556,1.39323986772945,0,0,0,1.86413195281952,1.40715635988658,1.2604344302271,2.3674473558521,1.37734962223183,1.54267112887378,0.930135779001631,1.07309360559848,1.28441876603886,1.48103864922132,0.656669856316381,1.86458261955468,2.77779976108131,1.09775057645525,1.34206418760372,0.630869845692382,2.16099685996497,0,0,5.97207101498655,1.85789337488351,1.80414445850931,0.605050573870028,0.667134131534611,0.760902504450237,0.474529061544512,0.164698954724011,0,0.397912944082302,0.58489226135736,0,0,0.199141273254367,4.1726938209678,1.37098215131675,4.50830942692322,0.814605311381257,1.55161989734101,0.98190147846446,0.885311519739602,1.47610147979602,0.784993639206874,0.987177311374404,1.1858105083486,1.00107063429656,0.982794975566015,0.449724224769707,0.811440485554012,0.482354319504834,0,0.287696137450811,0.648540907100142,0,1.43768206527355,0,0,0.757736633841335,0,0.482443521363367,0.184753190166605,3.03186258832776,3.25929952884052,1.69745085775188,0.704070744865506,1.00503754465089,1.19021820443007,0.195133647857799,0.315270288212382,0.44292937929755,0.637819074629948,0.491589944147214,0.690739927463582,0.433947175744535,0,0,0.983528546038072,1.10374698521893,0.80275294993896,0.937693492737625,0.655739781506702,1.76729649043061,3.78609863299508,4.29482618726302,6.03185513651837,4.30143836314594,4.23317480756549,7.64306633129848,1.21443210502468,2.63030272120181,5.92931666919785,0.642642632843614,6.95506417520516,5.1639025063504,4.39794790254655,1.97964147567043,5.30980553359851,1.45668381692989,1.51161778482376,0,0.885905678642318,0.307435147943927,0.516856586336442,1.45413491791002,0.712994756769443,1.26414703174326,1.05418608574999,2.06271086496374,1.02131881726136,2.34079422240703,4.01011919726539,4.07240366560025,1.95074257006501,1.42695054081656,1.81003922662333,0.608929898229199,0.23467170806371,0.847328283455281,0.441056796109924,1.48397627647332,0.322928853391811,0.784068024066026,0.954978752025092,1.14898629821543,0.291480836629851,0.556275906031529,0.854354403989263,0.619160603889667,0.370389054739423,1.13021074202815,0.546776910884101,0.457556346413045,0.169978429993855,0.559805809294632,0.414599921413271,1.90934123603023,3.95419991976419,1.21991680276109,0.324016022465404,1.04544148007234,0.655087691238533,0.674321731924103,0.41326727862668,1.30877970992015,0.388844919875379,0,3.38215763210514,2.69129782879162,1.48912641411388,3.88902376688095,2.32487682259916,1.85851738039856,1.87771581833206,2.604087696879,3.25063967719704,6.28118714147616,5.18454011264158,0.632022241256357,0.405450430580328,0.924398614483445,0.909445760844565,1.43221356533985,2.18549490259391,1.20195449519969,1.18151621739662,0.807731599585181,0.533447646584999,0.806609481094724,1.36441033035653,0.769694733122636,1.05189211963412,2.26730383615211,0.665957860122194,1.16628013592318,0.503653849092235,0.965947970160952,1.31377732815827,0.73260649706906,0.214368379079066,0.501572104035363,0.564751842617067,1.38097570952153,0.572895513439397,1.71853182343688,0,1.5107877947794,0.675022500231806,0.45032120322422,0.453142408984205,0,8.40677515431831,7.18244772121856,3.75613932659095,4.37592090722929,1.88651846365184,1.65459157605013,1.11123363900808,1.44224540067226,0.962757628775446,1.26348605881899,0.25347929989024,1.32038438970253,1.49826411951812,1.15245274328765,2.01024141344646,3.33405583898152,1.73826488917283,1.73618298417335,1.23625770240992,1.32479028120958,1.71434626192708,1.06485483695602,0.476872379894642,1.59881058295561,2.35273451038327,1.18460451048347,0.73171189149109,0.789209134313529,1.62964936615034,2.24456908663095,1.77952527186261,0.985044823755635,1.22769312950907,1.39443157067369,0.964533054905707,2.49810577937946,2.10538447600868,1.50409737833809,0.956441660344217,0.441182838239031,0.695603506861264
|short_description=p2@Lsm14b
}}

Revision as of 23:10, 13 September 2013

Short description:p2@Lsm14b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Lsm14b_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: -72bp_to_ENSMUST00000055485, ENSMUST00000164284, NM_177727, uc008ohy.1_5end
EntrezGene:Lsm14b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Lsm14b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.81
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.62
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.52
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.84
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.06
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C312.54
Mouse Granule cells, donor2.CNhs12357.11731-123E37.93
Mouse Granule cells, donor3.CNhs12108.11636-122C715.21
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.37
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C83.60
Mouse Microglia, donor2.CNhs12634.11736-123E89.22
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D512.24
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F515.80
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D914.93
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.09
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D213.47
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F210.26
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D618.38
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.66
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D413.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F49.06
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D89.38
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.44
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.30
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.70
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.46
Mouse Schwann, donor1.CNhs12507.11728-123D95.23
Mouse Schwann, donor2.CNhs12573.11746-123F94.46
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.68
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.28
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.90
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F13.64
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B21.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.32
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.00
epididymis, adult.CNhs10490.58-23B21.52
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C64.16
eyeball, embryo E14.CNhs10521.399-16E23.45
eyeball, embryo E15.CNhs10593.426-16C95.76
eyeball, embryo E17.CNhs11023.1261-18D42.71
eyeball, neonate N00.CNhs11207.633-15C62.04
eyeball, neonate N01.CNhs11140.1532-43E72.82
eyeball, neonate N02.CNhs11205.1551-44G85.25
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E28.41
forelimb, embryo E12.CNhs10600.359-14H25.48
forelimb, embryo E13.CNhs10589.384-1E22.46
forelimb, embryo E14.CNhs10577.413-26A82.85
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.86
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I91.26
heart, embryo E14.CNhs10597.403-26D42.37
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C61.54
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E31.28
heart, neonate N03.CNhs11221.1349-25I21.48
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G11.86
heart, neonate N20.CNhs11127.821-26I62.78
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D21.34
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G12.16
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I55.97
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D81.80
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I94.17
kidney, embryo E15.CNhs10997.434-16F81.37
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G70.98
kidney, neonate N10.CNhs11206.758-6D50.89
kidney, neonate N20.CNhs11113.832-19I11.48
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.99
liver, adult pregnant day01.CNhs10466.508-5B21.19
liver, embryo E12.CNhs10601.355-15F81.00
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G23.03
lung, embryo E14.CNhs10604.404-26F83.26
lung, embryo E15.CNhs11020.432-17C51.70
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A30.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.79
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E24.29
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.03
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.30
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D97.64
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.63
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.93
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I76.96
ovary, embryo E18.CNhs11040.505-44H75.16
ovary, neonate N00.CNhs11217.1299-22I44.40
oviduct, adult pregnant day01.CNhs10500.988-6G61.98
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E62.34
pituitary gland, embryo E13.CNhs11009.370-44C74.01
pituitary gland, embryo E14.CNhs11037.398-44A54.07
pituitary gland, embryo E15.CNhs10592.427-16B91.95
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C31.48
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.78
skin, neonate N06.CNhs11097.693-20I50.95
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D11.13
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E33.95
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G53.38
testis, embryo E13.CNhs11031.389-23F52.69
testis, embryo E15.CNhs11034.443-27C51.49
testis, embryo E16.CNhs11033.470-26G53.89
testis, embryo E17.CNhs11029.486-18I52.32
testis, embryo E18.CNhs11027.503-18G51.86
testis, neonate N00.CNhs11189.1300-22B71.88
testis, neonate N07.CNhs11222.726-26I42.60
testis, neonate N10.CNhs11204.763-44D93.25
testis, neonate N20.CNhs11110.839-18H36.28
testis, neonate N30.CNhs11130.1391-42E25.18
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G42.19
thymus, neonate N02.CNhs11181.1541-43F81.20
thymus, neonate N03.CNhs11137.2104-43C71.18
thymus, neonate N06.CNhs11197.681-26C40.81
thymus, neonate N07.CNhs11211.713-19D30.53
thymus, neonate N10.CNhs11194.748-24E40.81
thymus, neonate N20.CNhs11186.820-7A21.36
thymus, neonate N25.CNhs11125.1362-25G70.77
thymus, neonate N30.CNhs11132.1393-42G21.05
tongue, adult.CNhs10499.32-1B42.27
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.17
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F51.31
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.72
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I88.41
whole body, embryo E12.CNhs10587.857-27C97.18
whole body, embryo E13.CNhs10512.372-23H23.76
whole body, embryo E14.5.CNhs10578.420-27D24.38
whole body, embryo E14.CNhs10519.395-14B11.89
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.50
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.35
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.63
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B32.11
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neural cell4.05e-2043
ectodermal cell3.56e-1944
neurectodermal cell3.56e-1944
neuron8.20e-1733
neuronal stem cell8.20e-1733
neuroblast8.20e-1733
electrically signaling cell8.20e-1733
electrically responsive cell9.31e-1339
electrically active cell9.31e-1339
CNS neuron (sensu Vertebrata)9.62e-1323
neuroblast (sensu Vertebrata)9.62e-1323
embryonic cell5.00e-1170

Uber anatomy
Ontology termp-valuen
nervous system7.67e-1275
ectoderm-derived structure2.27e-1195
ectoderm2.27e-1195
presumptive ectoderm2.27e-1195
central nervous system7.18e-1173
neurectoderm4.48e-0764
neural plate4.48e-0764
presumptive neural plate4.48e-0764







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