FFCP PHASE1:Mm9::chr2:27331142..27331218,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=67382|HGNC=|MCL_coexpression_id=108|UniProt=Q8K2F0,A2AKA9,Q3TUI3,Q5CCJ9|association_with_transcript=0bp_to_ENSMUST00000077737,ENSMUST00000113941,ENSMUST00000130932,ENSMUST00000138693,NM_001113573,NM_001113574,uc008ixl.2,uc008ixn.2_5end|description=CAGE_peak_1_at_Brd3_5end|id=chr2:27331142..27331218,-|ontology_enrichment_celltype=CL:0000540!1.47e-08!33;CL:0000047!1.47e-08!33;CL:0000031!1.47e-08!33;CL:0000404!1.47e-08!33|ontology_enrichment_celltype_v019_2=CL:0000540,1.47e-08,33;CL:0000047,1.47e-08,33;CL:0000031,1.47e-08,33;CL:0000404,1.47e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!4.64e-09!333;UBERON:0000922!1.69e-07!328|ontology_enrichment_uberon_v019_2=|phase1_expression=31.2290251854348,12.9120900826564,10.0099832665698,14.215817931421,14.0250804384977,25.6855286025191,17.7545606852599,13.0414556675992,12.9525624379533,12.6394844213876,18.320322600129,20.3419005438108,16.2640693434645,15.9105132402575,21.9852442798337,14.7806945194573,15.3903613188192,19.4009231695316,16.1795031654772,13.580468857537,24.8326407241124,23.333373532208,12.7987896678078,10.3995074815714,6.8822784320151,8.03924749761028,7.75371593086335,13.3592164265251,7.79096019771133,12.6015064879965,9.75614246883341,13.3356441426523,12.3012957516914,0,15.8868390863201,16.7896991812077,19.3960888449251,48.9682007962182,33.5974198145234,43.9759944937991,53.5290654108223,60.7910481613017,51.4640974213023,17.1219672446785,20.3767631751224,16.8863011988747,36.7723931843578,19.4042389178597,20.6505011770404,18.2764105129826,15.5384928004152,17.2503077237966,14.0937389088499,12.3311564141929,15.4603147605533,19.551717138732,19.4842739158355,22.6895720602075,94.6841036822918,77.2326829737168,84.933408069828,23.7191172448392,20.4537803105562,14.8483453351431,17.7995945262055,12.7886420690298,20.0732074047331,31.5059010363675,105.348646105413,110.97488130865,83.0783597337959,40.5624397853401,39.3146002893872,97.0127129782436,117.506547468358,109.387035606592,27.5289702498472,29.8788371119339,26.4203237200739,106.696006773727,104.936327211964,106.787240964136,21.4970909231063,25.8870800614573,26.8924916087186,40.3641162098925,48.1216281100968,66.5446021596323,15.22096485997,23.3516120729967,20.8702431865208,16.3480536626463,13.599426674155,22.1278308571505,22.7421746106684,25.9855594516455,20.7857741794993,22.3263722577256,13.5088722393492,13.7802434059033,18.5913314105218,43.6310023208681,43.3168907501298,21.3320010945999,12.123498296628,12.4146334082798,10.6160133453104,23.0651437032501,59.8146511224967,32.8057127333263,32.4417561052674,25.2706346999077,30.9024766323118,30.4459733916298,39.5098055975968,29.1546491884847,38.3152199988279,31.3780604516208,30.9613693182456,44.4858837355375,31.1386541029155,24.2437626567611,3.72783522436244,30.7419836862124,28.2753054198164,23.2465920239818,12.7004031976275,12.5979573508616,13.0882333885257,26.0635712564392,19.2150253183823,79.7905135916689,23.8139318663419,29.6629930503183,24.103413168909,24.4984307232314,39.3099944462221,29.360045063982,20.7232661915613,25.6739064181498,53.6096225006339,34.025511456154,60.5008756145973,43.2522827188502,53.544724832095,48.2988725473884,49.0060019447382,30.0095910057258,95.4966208692491,84.9086299953509,66.3335738098087,56.5524989663143,47.8241268668028,51.1930684787585,38.0696952354695,41.0010589646096,14.0442637462647,10.808612098818,12.7873574728017,48.4674307733074,37.0551174770132,37.6329708453521,48.5326707949681,37.1884398002593,31.7790252547999,33.2523540993083,34.0707219777516,28.0236821681207,33.7347692322635,32.5051578876609,31.9411109610672,19.4445983275692,19.1008600303214,20.2651692328161,25.6553737248235,71.1070871540855,16.8513579321737,16.1314845664762,55.8815216402313,47.3762810595295,56.4439480590769,43.3619577940186,41.3623161551459,26.4413620296457,20.8792787079585,20.9167672499494,27.6468729680296,27.4559931416788,27.8798644580342,25.1669434423182,20.533114738096,20.5115511451998,63.7284147202354,45.927902069111,43.9560169125014,35.63898237293,36.8509725618489,34.6470950258174,29.974118596898,23.4700135287567,17.583857518234,14.5608653427725,15.7119892356189,39.3754449489982,32.0391162034521,30.1315230595704,31.849039057995,30.3883221288045,20.1154422907322,27.331133057827,32.9134510353322,26.6324570792439,30.1913233707445,30.1434167611488,32.1398803307997,31.572359743389,29.4211758175936,20.7450714186248,24.5721742921584,48.3203100014736,57.6896016604772,38.0228992136421,31.9178737672363,34.8413015478977,33.0880660831559,34.1483883751148,39.8816914588663,40.5280382057258,41.4582398509466,23.5963173190663,24.6939524068231,21.1187625529007,21.1107797514981,9.79030230873677,20.6540994667995,29.8011686009111,19.1055202085472,21.332526959781,26.5574611510214,23.2273253028023,36.5989534522858,40.2151906625538,48.6856878876126,47.0768531966527,42.7773454238197,54.9168469730335,47.7676627976375,37.1164939547366,57.3167278022459,29.8828824272281,36.0527816429002,35.43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| ||
|EntrezGene=67382 | |||
|HGNC= | |||
|MCL_coexpression_id=108 | |||
|UniProt=Q8K2F0,A2AKA9,Q3TUI3,Q5CCJ9 | |||
|association_with_transcript=0bp_to_ENSMUST00000077737,ENSMUST00000113941,ENSMUST00000130932,ENSMUST00000138693,NM_001113573,NM_001113574,uc008ixl.2,uc008ixn.2_5end | |||
|description=CAGE_peak_1_at_Brd3_5end | |||
|id=chr2:27331142..27331218,- | |||
|ontology_enrichment_celltype=CL:0000540!1.47e-08!33;CL:0000047!1.47e-08!33;CL:0000031!1.47e-08!33;CL:0000404!1.47e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.47e-08,33;CL:0000047,1.47e-08,33;CL:0000031,1.47e-08,33;CL:0000404,1.47e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!4.64e-09!333;UBERON:0000922!1.69e-07!328 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=31.2290251854348,12.9120900826564,10.0099832665698,14.215817931421,14.0250804384977,25.6855286025191,17.7545606852599,13.0414556675992,12.9525624379533,12.6394844213876,18.320322600129,20.3419005438108,16.2640693434645,15.9105132402575,21.9852442798337,14.7806945194573,15.3903613188192,19.4009231695316,16.1795031654772,13.580468857537,24.8326407241124,23.333373532208,12.7987896678078,10.3995074815714,6.8822784320151,8.03924749761028,7.75371593086335,13.3592164265251,7.79096019771133,12.6015064879965,9.75614246883341,13.3356441426523,12.3012957516914,0,15.8868390863201,16.7896991812077,19.3960888449251,48.9682007962182,33.5974198145234,43.9759944937991,53.5290654108223,60.7910481613017,51.4640974213023,17.1219672446785,20.3767631751224,16.8863011988747,36.7723931843578,19.4042389178597,20.6505011770404,18.2764105129826,15.5384928004152,17.2503077237966,14.0937389088499,12.3311564141929,15.4603147605533,19.551717138732,19.4842739158355,22.6895720602075,94.6841036822918,77.2326829737168,84.933408069828,23.7191172448392,20.4537803105562,14.8483453351431,17.7995945262055,12.7886420690298,20.0732074047331,31.5059010363675,105.348646105413,110.97488130865,83.0783597337959,40.5624397853401,39.3146002893872,97.0127129782436,117.506547468358,109.387035606592,27.5289702498472,29.8788371119339,26.4203237200739,106.696006773727,104.936327211964,106.787240964136,21.4970909231063,25.8870800614573,26.8924916087186,40.3641162098925,48.1216281100968,66.5446021596323,15.22096485997,23.3516120729967,20.8702431865208,16.3480536626463,13.599426674155,22.1278308571505,22.7421746106684,25.9855594516455,20.7857741794993,22.3263722577256,13.5088722393492,13.7802434059033,18.5913314105218,43.6310023208681,43.3168907501298,21.3320010945999,12.123498296628,12.4146334082798,10.6160133453104,23.0651437032501,59.8146511224967,32.8057127333263,32.4417561052674,25.2706346999077,30.9024766323118,30.4459733916298,39.5098055975968,29.1546491884847,38.3152199988279,31.3780604516208,30.9613693182456,44.4858837355375,31.1386541029155,24.2437626567611,3.72783522436244,30.7419836862124,28.2753054198164,23.2465920239818,12.7004031976275,12.5979573508616,13.0882333885257,26.0635712564392,19.2150253183823,79.7905135916689,23.8139318663419,29.6629930503183,24.103413168909,24.4984307232314,39.3099944462221,29.360045063982,20.7232661915613,25.6739064181498,53.6096225006339,34.025511456154,60.5008756145973,43.2522827188502,53.544724832095,48.2988725473884,49.0060019447382,30.0095910057258,95.4966208692491,84.9086299953509,66.3335738098087,56.5524989663143,47.8241268668028,51.1930684787585,38.0696952354695,41.0010589646096,14.0442637462647,10.808612098818,12.7873574728017,48.4674307733074,37.0551174770132,37.6329708453521,48.5326707949681,37.1884398002593,31.7790252547999,33.2523540993083,34.0707219777516,28.0236821681207,33.7347692322635,32.5051578876609,31.9411109610672,19.4445983275692,19.1008600303214,20.2651692328161,25.6553737248235,71.1070871540855,16.8513579321737,16.1314845664762,55.8815216402313,47.3762810595295,56.4439480590769,43.3619577940186,41.3623161551459,26.4413620296457,20.8792787079585,20.9167672499494,27.6468729680296,27.4559931416788,27.8798644580342,25.1669434423182,20.533114738096,20.5115511451998,63.7284147202354,45.927902069111,43.9560169125014,35.63898237293,36.8509725618489,34.6470950258174,29.974118596898,23.4700135287567,17.583857518234,14.5608653427725,15.7119892356189,39.3754449489982,32.0391162034521,30.1315230595704,31.849039057995,30.3883221288045,20.1154422907322,27.331133057827,32.9134510353322,26.6324570792439,30.1913233707445,30.1434167611488,32.1398803307997,31.572359743389,29.4211758175936,20.7450714186248,24.5721742921584,48.3203100014736,57.6896016604772,38.0228992136421,31.9178737672363,34.8413015478977,33.0880660831559,34.1483883751148,39.8816914588663,40.5280382057258,41.4582398509466,23.5963173190663,24.6939524068231,21.1187625529007,21.1107797514981,9.79030230873677,20.6540994667995,29.8011686009111,19.1055202085472,21.332526959781,26.5574611510214,23.2273253028023,36.5989534522858,40.2151906625538,48.6856878876126,47.0768531966527,42.7773454238197,54.9168469730335,47.7676627976375,37.1164939547366,57.3167278022459,29.8828824272281,36.0527816429002,35.4350551297838,36.6495658545546,26.7251599215507,34.5137359683903,35.4459728786273,34.7672090509464,27.3477365646052,29.5301892880773,31.6658202382245,34.1125346982052,35.6263054887955,35.2932404600874,26.5470876666085,26.3546521437497,25.7838858120467,26.5542892487955,55.2787558676122,51.096680094188,36.2229589203391,51.2513275226171,42.986885042099,28.631529584769,24.0527309800533,40.5982054950219,46.1793914483128,18.5243854366168,55.7315534942203,43.4339307811986,41.9174828250683,33.0661392888688,28.0680938564055,23.6099477670179,22.8073121472927,27.3393409276564,31.577190798373,31.1126805981116,27.3134262656802,32.806614653046,20.3612574153805,14.10820968949,14.4149995893368,16.7221968303353,23.8667654503778,63.4253667130176,49.406630511824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| |||
|short_description=p1@Brd3 | |||
}} | |||
Revision as of 23:34, 13 September 2013
| Short description: | p1@Brd3 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Brd3_5end |
| Coexpression cluster: | MCL_coexpression_mm9:108 |
| Association with transcript: | 0bp_to_ENSMUST00000077737, ENSMUST00000113941, ENSMUST00000130932, ENSMUST00000138693, NM_001113573, NM_001113574, uc008ixl.2, uc008ixn.2_5end |
| EntrezGene: | Brd3 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neuron | 1.47e-08 | 33 |
| neuronal stem cell | 1.47e-08 | 33 |
| neuroblast | 1.47e-08 | 33 |
| electrically signaling cell | 1.47e-08 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
