FFCP PHASE1:Mm9::chr3:87804110..87804115,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=12032|HGNC=|MCL_coexpression_id=428|UniProt=Q61361,Q3TSQ8|association_with_transcript=162bp_to_ENSMUST00000090971,NM_001109758,NM_007529,uc008pto.2,uc008ptp.2_5end|description=CAGE_peak_8_at_Bcan_5end|id=chr3:87804110..87804115,-|ontology_enrichment_celltype=CL:0000117!3.60e-15!23;CL:0000337!3.60e-15!23;CL:0002319!3.07e-11!43;CL:0000221!7.65e-11!44;CL:0000133!7.65e-11!44;CL:0000540!2.71e-10!33;CL:0000047!2.71e-10!33;CL:0000031!2.71e-10!33;CL:0000404!2.71e-10!33;CL:0000055!8.15e-09!50;CL:0000393!5.82e-08!39;CL:0000211!5.82e-08!39|ontology_enrichment_celltype_v019_2=CL:0000117,3.32e-13,23;CL:0000337,3.32e-13,23;CL:0002610,2.29e-09,3;CL:0002614,2.29e-09,3;CL:0002612,5.24e-09,3;CL:0002319,7.49e-09,43;CL:0000221,1.38e-08,44;CL:0000133,1.38e-08,44;CL:0000540,1.59e-08,33;CL:0000047,1.59e-08,33;CL:0000031,1.59e-08,33;CL:0000404,1.59e-08,33;CL:0000878,3.01e-07,2;CL:0000129,3.01e-07,2;CL:0002611,4.21e-07,2;CL:0000393,7.05e-07,39;CL:0000211,7.05e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.15e-33!73;UBERON:0005743!1.15e-33!73;UBERON:0001049!8.25e-33!52;UBERON:0005068!8.25e-33!52;UBERON:0006241!8.25e-33!52;UBERON:0007135!8.25e-33!52;UBERON:0000073!2.06e-32!75;UBERON:0001016!2.06e-32!75;UBERON:0000955!7.07e-30!50;UBERON:0006238!7.07e-30!50;UBERON:0002616!9.50e-29!49;UBERON:0002020!1.15e-27!34;UBERON:0000033!9.07e-23!63;UBERON:0002346!3.35e-22!71;UBERON:0003075!3.35e-22!71;UBERON:0007284!3.35e-22!71;UBERON:0004121!2.19e-21!102;UBERON:0000924!2.19e-21!102;UBERON:0006601!2.19e-21!102;UBERON:0002791!9.76e-21!29;UBERON:0003528!9.76e-21!29;UBERON:0001893!9.76e-21!29;UBERON:0003080!6.24e-20!40;UBERON:0002780!1.09e-18!39;UBERON:0001890!1.09e-18!39;UBERON:0006240!1.09e-18!39;UBERON:0003056!5.70e-16!49;UBERON:0003076!5.01e-14!12;UBERON:0003057!5.01e-14!12;UBERON:0007811!7.64e-14!86;UBERON:0000956!1.54e-13!21;UBERON:0001869!1.54e-13!21;UBERON:0000203!1.54e-13!21;UBERON:0000153!8.51e-12!94;UBERON:0002619!1.43e-11!17;UBERON:0002021!9.40e-11!10;UBERON:0000411!9.40e-11!10;UBERON:0001950!9.40e-11!10;UBERON:0002240!7.06e-10!6;UBERON:0005174!7.06e-10!6;UBERON:0001137!7.06e-10!6;UBERON:0002298!8.10e-10!6;UBERON:0000025!4.50e-09!114;UBERON:0001948!1.31e-08!5;UBERON:0002315!1.31e-08!5;UBERON:0002420!1.56e-08!8;UBERON:0007245!1.56e-08!8;UBERON:0010009!1.56e-08!8;UBERON:0010011!1.56e-08!8;UBERON:0000454!1.56e-08!8;UBERON:0004111!7.87e-08!122;UBERON:0002950!3.12e-07!4;UBERON:0001891!3.12e-07!4;UBERON:0009616!3.12e-07!4|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.01e-34,54;UBERON:0001017,4.39e-31,73;UBERON:0001049,2.09e-30,52;UBERON:0005068,2.09e-30,52;UBERON:0006241,2.09e-30,52;UBERON:0007135,2.09e-30,52;UBERON:0001016,4.23e-30,75;UBERON:0002020,6.62e-25,34;UBERON:0002346,1.08e-23,64;UBERON:0003075,1.08e-23,64;UBERON:0007284,1.08e-23,64;UBERON:0004121,1.59e-22,95;UBERON:0000924,1.59e-22,95;UBERON:0006601,1.59e-22,95;UBERON:0010371,4.19e-20,73;UBERON:0002616,3.74e-19,46;UBERON:0000955,1.19e-18,47;UBERON:0006238,1.19e-18,47;UBERON:0003076,2.39e-17,12;UBERON:0003057,2.39e-17,12;UBERON:0002240,8.45e-17,6;UBERON:0005174,8.45e-17,6;UBERON:0001137,8.45e-17,6;UBERON:0003080,6.54e-16,40;UBERON:0002021,4.17e-15,10;UBERON:0000411,4.17e-15,10;UBERON:0001950,4.17e-15,10;UBERON:0003528,4.28e-15,29;UBERON:0002791,4.28e-15,29;UBERON:0001893,4.28e-15,29;UBERON:0010314,7.93e-15,92;UBERON:0001948,1.78e-14,5;UBERON:0002315,1.78e-14,5;UBERON:0002780,2.90e-14,39;UBERON:0001890,2.90e-14,39;UBERON:0006240,2.90e-14,39;UBERON:0003056,2.60e-12,49;UBERON:0002950,5.81e-12,4;UBERON:0001891,5.81e-12,4;UBERON:0009616,5.81e-12,4;UBERON:0010286,5.81e-12,4;UBERON:0000025,6.55e-11,114;UBERON:0002619,8.65e-11,17;UBERON:0000956,1.88e-10,21;UBERON:0001869,1.88e-10,21;UBERON:0000203,1.88e-10,21;UBERON:0004111,7.77e-10,122;UBERON:0002038,2.29e-09,3;UBERON:0009663,2.29e-09,3;UBERON:0009661,2.29e-09,3;UBERON:0000125,2.29e-09,3;UBERON:0002308,2.29e-09,3;UBERON:0004684,2.29e-09,3;UBERON:0002275,2.29e-09,3;UBERON:0002257,5.24e-09,3;UBERON:0011216,6.40e-08,194;UBERON:0002256,4.21e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0,0,0,0.606949382578793,0,0,0,0,0,0,0,3.29560121570245,4.99483796918021,0.103689612308478,0.405017814995072,0,2.85650984403804,4.41737081903227,0,0.0958454710182364,0,3.30347642998166,3.19218345212969,1.99688493233117,0.263772575460388,0.182975287204819,0,3.90856198601933,2.25105044012672,2.59757021220577,2.35702868378934,3.27454865837937,1.86399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46390398505774,0.83778682725382,0,0,0,0,2.84602214869163,2.74500361691176,0.502617408451458,1.73824320192276,3.58001640262463,2.49345653471472,3.0825839982874,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52347938276953,0.720332286654991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40825884981688,1.99259867206745,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0.129159823477731,0,0.117357238645754,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,1.84130094602871,1.71868654031819,2.23409137046794,0,1.5107877947794,1.35004500046361,1.80128481289688,0.453142408984205,1.03552062350364,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0.17230640686684,0,0,0,0.412085900803307,0.147198920134397,0.342869252385415,0,0,0,0.0941093804153306,0.169229215783353,0,0,0.135804113845862,1.12228454331548,0,0.197008964751127,0,0,0,0.499621155875892,0,0,0,0,0|short_description=p8@Bcan}} | ||
|EntrezGene=12032 | |||
|HGNC= | |||
|MCL_coexpression_id=428 | |||
|UniProt=Q61361,Q3TSQ8 | |||
|association_with_transcript=162bp_to_ENSMUST00000090971,NM_001109758,NM_007529,uc008pto.2,uc008ptp.2_5end | |||
|description=CAGE_peak_8_at_Bcan_5end | |||
|id=chr3:87804110..87804115,- | |||
|ontology_enrichment_celltype=CL:0000117!3.60e-15!23;CL:0000337!3.60e-15!23;CL:0002319!3.07e-11!43;CL:0000221!7.65e-11!44;CL:0000133!7.65e-11!44;CL:0000540!2.71e-10!33;CL:0000047!2.71e-10!33;CL:0000031!2.71e-10!33;CL:0000404!2.71e-10!33;CL:0000055!8.15e-09!50;CL:0000393!5.82e-08!39;CL:0000211!5.82e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.32e-13,23;CL:0000337,3.32e-13,23;CL:0002610,2.29e-09,3;CL:0002614,2.29e-09,3;CL:0002612,5.24e-09,3;CL:0002319,7.49e-09,43;CL:0000221,1.38e-08,44;CL:0000133,1.38e-08,44;CL:0000540,1.59e-08,33;CL:0000047,1.59e-08,33;CL:0000031,1.59e-08,33;CL:0000404,1.59e-08,33;CL:0000878,3.01e-07,2;CL:0000129,3.01e-07,2;CL:0002611,4.21e-07,2;CL:0000393,7.05e-07,39;CL:0000211,7.05e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.15e-33!73;UBERON:0005743!1.15e-33!73;UBERON:0001049!8.25e-33!52;UBERON:0005068!8.25e-33!52;UBERON:0006241!8.25e-33!52;UBERON:0007135!8.25e-33!52;UBERON:0000073!2.06e-32!75;UBERON:0001016!2.06e-32!75;UBERON:0000955!7.07e-30!50;UBERON:0006238!7.07e-30!50;UBERON:0002616!9.50e-29!49;UBERON:0002020!1.15e-27!34;UBERON:0000033!9.07e-23!63;UBERON:0002346!3.35e-22!71;UBERON:0003075!3.35e-22!71;UBERON:0007284!3.35e-22!71;UBERON:0004121!2.19e-21!102;UBERON:0000924!2.19e-21!102;UBERON:0006601!2.19e-21!102;UBERON:0002791!9.76e-21!29;UBERON:0003528!9.76e-21!29;UBERON:0001893!9.76e-21!29;UBERON:0003080!6.24e-20!40;UBERON:0002780!1.09e-18!39;UBERON:0001890!1.09e-18!39;UBERON:0006240!1.09e-18!39;UBERON:0003056!5.70e-16!49;UBERON:0003076!5.01e-14!12;UBERON:0003057!5.01e-14!12;UBERON:0007811!7.64e-14!86;UBERON:0000956!1.54e-13!21;UBERON:0001869!1.54e-13!21;UBERON:0000203!1.54e-13!21;UBERON:0000153!8.51e-12!94;UBERON:0002619!1.43e-11!17;UBERON:0002021!9.40e-11!10;UBERON:0000411!9.40e-11!10;UBERON:0001950!9.40e-11!10;UBERON:0002240!7.06e-10!6;UBERON:0005174!7.06e-10!6;UBERON:0001137!7.06e-10!6;UBERON:0002298!8.10e-10!6;UBERON:0000025!4.50e-09!114;UBERON:0001948!1.31e-08!5;UBERON:0002315!1.31e-08!5;UBERON:0002420!1.56e-08!8;UBERON:0007245!1.56e-08!8;UBERON:0010009!1.56e-08!8;UBERON:0010011!1.56e-08!8;UBERON:0000454!1.56e-08!8;UBERON:0004111!7.87e-08!122;UBERON:0002950!3.12e-07!4;UBERON:0001891!3.12e-07!4;UBERON:0009616!3.12e-07!4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.01e-34,54;UBERON:0001017,4.39e-31,73;UBERON:0001049,2.09e-30,52;UBERON:0005068,2.09e-30,52;UBERON:0006241,2.09e-30,52;UBERON:0007135,2.09e-30,52;UBERON:0001016,4.23e-30,75;UBERON:0002020,6.62e-25,34;UBERON:0002346,1.08e-23,64;UBERON:0003075,1.08e-23,64;UBERON:0007284,1.08e-23,64;UBERON:0004121,1.59e-22,95;UBERON:0000924,1.59e-22,95;UBERON:0006601,1.59e-22,95;UBERON:0010371,4.19e-20,73;UBERON:0002616,3.74e-19,46;UBERON:0000955,1.19e-18,47;UBERON:0006238,1.19e-18,47;UBERON:0003076,2.39e-17,12;UBERON:0003057,2.39e-17,12;UBERON:0002240,8.45e-17,6;UBERON:0005174,8.45e-17,6;UBERON:0001137,8.45e-17,6;UBERON:0003080,6.54e-16,40;UBERON:0002021,4.17e-15,10;UBERON:0000411,4.17e-15,10;UBERON:0001950,4.17e-15,10;UBERON:0003528,4.28e-15,29;UBERON:0002791,4.28e-15,29;UBERON:0001893,4.28e-15,29;UBERON:0010314,7.93e-15,92;UBERON:0001948,1.78e-14,5;UBERON:0002315,1.78e-14,5;UBERON:0002780,2.90e-14,39;UBERON:0001890,2.90e-14,39;UBERON:0006240,2.90e-14,39;UBERON:0003056,2.60e-12,49;UBERON:0002950,5.81e-12,4;UBERON:0001891,5.81e-12,4;UBERON:0009616,5.81e-12,4;UBERON:0010286,5.81e-12,4;UBERON:0000025,6.55e-11,114;UBERON:0002619,8.65e-11,17;UBERON:0000956,1.88e-10,21;UBERON:0001869,1.88e-10,21;UBERON:0000203,1.88e-10,21;UBERON:0004111,7.77e-10,122;UBERON:0002038,2.29e-09,3;UBERON:0009663,2.29e-09,3;UBERON:0009661,2.29e-09,3;UBERON:0000125,2.29e-09,3;UBERON:0002308,2.29e-09,3;UBERON:0004684,2.29e-09,3;UBERON:0002275,2.29e-09,3;UBERON:0002257,5.24e-09,3;UBERON:0011216,6.40e-08,194;UBERON:0002256,4.21e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0,0,0,0.606949382578793,0,0,0,0,0,0,0,3.29560121570245,4.99483796918021,0.103689612308478,0.405017814995072,0,2.85650984403804,4.41737081903227,0,0.0958454710182364,0,3.30347642998166,3.19218345212969,1.99688493233117,0.263772575460388,0.182975287204819,0,3.90856198601933,2.25105044012672,2.59757021220577,2.35702868378934,3.27454865837937,1.86399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46390398505774,0.83778682725382,0,0,0,0,2.84602214869163,2.74500361691176,0.502617408451458,1.73824320192276,3.58001640262463,2.49345653471472,3.0825839982874,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52347938276953,0.720332286654991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40825884981688,1.99259867206745,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0.129159823477731,0,0.117357238645754,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,1.84130094602871,1.71868654031819,2.23409137046794,0,1.5107877947794,1.35004500046361,1.80128481289688,0.453142408984205,1.03552062350364,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0.17230640686684,0,0,0,0.412085900803307,0.147198920134397,0.342869252385415,0,0,0,0.0941093804153306,0.169229215783353,0,0,0.135804113845862,1.12228454331548,0,0.197008964751127,0,0,0,0.499621155875892,0,0,0,0,0 | |||
|short_description=p8@Bcan | |||
}} |
Revision as of 02:44, 14 September 2013
Short description: | p8@Bcan |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Bcan_5end |
Coexpression cluster: | MCL_coexpression_mm9:428 |
Association with transcript: | 162bp_to_ENSMUST00000090971, NM_001109758, NM_007529, uc008pto.2, uc008ptp.2_5end |
EntrezGene: | Bcan |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.32e-13 | 23 |
neuroblast (sensu Vertebrata) | 3.32e-13 | 23 |
raphe nuclei neuron | 2.29e-09 | 3 |
neuron of the substantia nigra | 2.29e-09 | 3 |
neuron of the ventral spinal cord | 5.24e-09 | 3 |
neural cell | 7.49e-09 | 43 |
ectodermal cell | 1.38e-08 | 44 |
neurectodermal cell | 1.38e-08 | 44 |
neuron | 1.59e-08 | 33 |
neuronal stem cell | 1.59e-08 | 33 |
neuroblast | 1.59e-08 | 33 |
electrically signaling cell | 1.59e-08 | 33 |
central nervous system macrophage | 3.01e-07 | 2 |
microglial cell | 3.01e-07 | 2 |
neuron of the dorsal spinal cord | 4.21e-07 | 2 |
electrically responsive cell | 7.05e-07 | 39 |
electrically active cell | 7.05e-07 | 39 |
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Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.