FFCP PHASE1:Mm9::chr4:100449399..100449411,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=320508|HGNC=|UniProt=Q6PDJ1|association_with_transcript=115bp_to_NM_198037,uc008tvg.1,uc008tvh.1_5end|description=CAGE_peak_3_at_Cachd1_5end|id=chr4:100449399..100449411,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!3.92e-09!333;UBERON:0000922!5.98e-08!328;UBERON:0000489!8.81e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0000489,3.40e-07,21|phase1_expression=1.44133962394315,0.348975407639361,0.454999239389536,0.60492842261366,0.500895729946347,1.34303417529512,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,1.29228598847722,0,0.380046838912748,1.00812051903972,0,0,0,0,1.1554064790051,1.16364251750945,2.85837098767317,0,0,0,0,0,0,0,0.202753862439029,0.183546752161682,0,1.96222640742402,2.41654801007919,2.3331587888914,2.09979632438044,1.43752564364972,0,0,0,0.514518872071894,0,0,4.65327859977075,3.70293685490423,4.43681982454325,0.338844532069132,0,0,0,0,0.599200221036809,3.45796474789399,2.28117147078651,1.21505344498522,1.68259969081106,1.71390590642282,1.32521124570968,0.367472397644862,1.15014565221884,0.919218786610021,3.30347642998166,2.29837208553338,1.38245879930619,3.42904348098504,2.92760459527711,0,1.11673199600552,0.56276261003168,1.06958773443767,2.35702868378934,1.56608848879013,3.54158947068071,0.37863096666592,0.302286240427142,1.73918693221007,0.860423876981386,0,0,0,0,0.421333260395256,0.852151612890289,0.259786004602869,0,1.54927761754349,0,0,0,0.216491041011214,0,0,0.45673551887624,0.258937883647172,1.03909497345377,0.520455980298408,1.21786191324856,0.230615497256059,0.301445281105245,0.470354828542819,0.251333182659351,0.494389935468748,1.01219549843938,0,0.647067399789637,0.220841518460394,0,3.72783522436244,0.878342391034642,0.628340120440365,1.53274233125155,0,0,0,2.09706895166752,1.83000241127451,1.63350657746724,0.869121600961382,1.53429274398198,2.28566849015516,1.62241263067758,2.13862664085664,0.497627882440372,2.0217820674694,0.210441855886474,1.69156575851515,0.919608417733892,0.180062129805349,1.35634336052144,0.748401490664606,0.384341160854549,0.374806898238915,0.517406741478031,3.23351989399263,3.59301552318857,4.92663147659057,2.6303487891309,2.22437799380478,2.43776516565517,2.67516777330327,2.58744546864041,0,0,0,0.414251545071004,1.87620847984877,0.540186184383045,0.710234206755631,1.18058539048442,1.23413690309903,1.86027155800326,1.07309360559848,1.98501082024188,0.987359099480883,0,0.0810688095458557,0,0,0.268412837520744,1.68231958851302,2.88132914661996,1.98251269790279,0.528901133327089,0.639864751605702,2.09013004674395,1.54640953586512,2.62188582010345,1.33426826306922,0.951128130562796,1.42358718463353,1.15289268306808,1.25667604400135,3.38226002469956,3.70431765526328,2.69645822596266,1.51296634912286,1.99141273254367,1.13800740571849,2.39921876480431,2.25415471346161,2.64746726198909,3.68509725618489,3.15611189506434,2.40298841072178,2.50937251565324,1.56998727841375,2.83813477020141,0,0.667380422864376,0.196558995113203,0.449724224769707,0,0.241177159752417,0,0.287696137450811,0,0.274561413188081,1.43768206527355,0.744281895337007,0,0.252578877947112,0.179397413521912,0,0.554259570499814,1.32643988239339,0.977789858652155,1.18821560042632,1.17345124144251,1.84256883185997,2.38043640886014,2.14647012643579,1.7339865851681,1.10732344824387,2.23236676120482,1.63863314715738,0.518054945597687,0.433947175744535,0,0,1.47529281905711,0.551873492609465,1.76605648986571,2.10981035865966,0.327869890753351,0.504941854408746,0,0.390438744296638,0.646270193198397,0.477937595905104,0.445597348164788,0.566153061577665,0.404810701674894,0,0.395287777946524,0.321321316421807,2.6968616189571,2.13678724400706,2.93196526836437,1.48473110675282,5.30980553359851,0.728341908464944,0.906970670894253,0.377210159511796,1.47650946440386,0.922305443831782,0.775284879504663,0.727067458955011,0.712994756769443,1.8962205476149,2.10837217149998,3.09406629744561,0,1.08036656418786,1.29358683782755,1.28602221018955,0.177340233642274,0.356737635204141,0.658196082408484,1.2178597964584,0.469343416127421,0,2.20528398054962,3.13283880588812,4.35953952078945,1.02531972377865,0.954978752025092,1.14898629821543,1.45740418314925,4.07935664423121,0.170870880797853,1.44470807574256,1.11116716421827,0,0,0,0,0,0,0,2.37251995185852,2.43983360552218,1.08005340821801,2.09088296014469,1.31017538247707,1.34864346384821,1.98368293740806,1.30877970992015,2.59229946583586,0.621339313086926,0,2.24274819065968,1.48912641411388,1.36115831840833,0.645799117388655,1.520605129417,1.64300134104056,0.5208175393758,0.314578033277133,0,0,0,1.01362607645082,1.02710957164827,0.77952493786677,0.716106782669926,0,0.360586348559907,0.147689527174577,0.302899349844443,0.228620419965,0.201652370273681,0,0,0.233753804363138,0.453460767230423,0,0,0,0.386379188064381,0.187682475451182,0.915758121336325,1.92931541171159,0.501572104035363,0,1.38097570952153,1.1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| ||
|EntrezGene=320508 | |||
|HGNC= | |||
|UniProt=Q6PDJ1 | |||
|association_with_transcript=115bp_to_NM_198037,uc008tvg.1,uc008tvh.1_5end | |||
|description=CAGE_peak_3_at_Cachd1_5end | |||
|id=chr4:100449399..100449411,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!3.92e-09!333;UBERON:0000922!5.98e-08!328;UBERON:0000489!8.81e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000489,3.40e-07,21 | |||
|phase1_expression=1.44133962394315,0.348975407639361,0.454999239389536,0.60492842261366,0.500895729946347,1.34303417529512,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,1.29228598847722,0,0.380046838912748,1.00812051903972,0,0,0,0,1.1554064790051,1.16364251750945,2.85837098767317,0,0,0,0,0,0,0,0.202753862439029,0.183546752161682,0,1.96222640742402,2.41654801007919,2.3331587888914,2.09979632438044,1.43752564364972,0,0,0,0.514518872071894,0,0,4.65327859977075,3.70293685490423,4.43681982454325,0.338844532069132,0,0,0,0,0.599200221036809,3.45796474789399,2.28117147078651,1.21505344498522,1.68259969081106,1.71390590642282,1.32521124570968,0.367472397644862,1.15014565221884,0.919218786610021,3.30347642998166,2.29837208553338,1.38245879930619,3.42904348098504,2.92760459527711,0,1.11673199600552,0.56276261003168,1.06958773443767,2.35702868378934,1.56608848879013,3.54158947068071,0.37863096666592,0.302286240427142,1.73918693221007,0.860423876981386,0,0,0,0,0.421333260395256,0.852151612890289,0.259786004602869,0,1.54927761754349,0,0,0,0.216491041011214,0,0,0.45673551887624,0.258937883647172,1.03909497345377,0.520455980298408,1.21786191324856,0.230615497256059,0.301445281105245,0.470354828542819,0.251333182659351,0.494389935468748,1.01219549843938,0,0.647067399789637,0.220841518460394,0,3.72783522436244,0.878342391034642,0.628340120440365,1.53274233125155,0,0,0,2.09706895166752,1.83000241127451,1.63350657746724,0.869121600961382,1.53429274398198,2.28566849015516,1.62241263067758,2.13862664085664,0.497627882440372,2.0217820674694,0.210441855886474,1.69156575851515,0.919608417733892,0.180062129805349,1.35634336052144,0.748401490664606,0.384341160854549,0.374806898238915,0.517406741478031,3.23351989399263,3.59301552318857,4.92663147659057,2.6303487891309,2.22437799380478,2.43776516565517,2.67516777330327,2.58744546864041,0,0,0,0.414251545071004,1.87620847984877,0.540186184383045,0.710234206755631,1.18058539048442,1.23413690309903,1.86027155800326,1.07309360559848,1.98501082024188,0.987359099480883,0,0.0810688095458557,0,0,0.268412837520744,1.68231958851302,2.88132914661996,1.98251269790279,0.528901133327089,0.639864751605702,2.09013004674395,1.54640953586512,2.62188582010345,1.33426826306922,0.951128130562796,1.42358718463353,1.15289268306808,1.25667604400135,3.38226002469956,3.70431765526328,2.69645822596266,1.51296634912286,1.99141273254367,1.13800740571849,2.39921876480431,2.25415471346161,2.64746726198909,3.68509725618489,3.15611189506434,2.40298841072178,2.50937251565324,1.56998727841375,2.83813477020141,0,0.667380422864376,0.196558995113203,0.449724224769707,0,0.241177159752417,0,0.287696137450811,0,0.274561413188081,1.43768206527355,0.744281895337007,0,0.252578877947112,0.179397413521912,0,0.554259570499814,1.32643988239339,0.977789858652155,1.18821560042632,1.17345124144251,1.84256883185997,2.38043640886014,2.14647012643579,1.7339865851681,1.10732344824387,2.23236676120482,1.63863314715738,0.518054945597687,0.433947175744535,0,0,1.47529281905711,0.551873492609465,1.76605648986571,2.10981035865966,0.327869890753351,0.504941854408746,0,0.390438744296638,0.646270193198397,0.477937595905104,0.445597348164788,0.566153061577665,0.404810701674894,0,0.395287777946524,0.321321316421807,2.6968616189571,2.13678724400706,2.93196526836437,1.48473110675282,5.30980553359851,0.728341908464944,0.906970670894253,0.377210159511796,1.47650946440386,0.922305443831782,0.775284879504663,0.727067458955011,0.712994756769443,1.8962205476149,2.10837217149998,3.09406629744561,0,1.08036656418786,1.29358683782755,1.28602221018955,0.177340233642274,0.356737635204141,0.658196082408484,1.2178597964584,0.469343416127421,0,2.20528398054962,3.13283880588812,4.35953952078945,1.02531972377865,0.954978752025092,1.14898629821543,1.45740418314925,4.07935664423121,0.170870880797853,1.44470807574256,1.11116716421827,0,0,0,0,0,0,0,2.37251995185852,2.43983360552218,1.08005340821801,2.09088296014469,1.31017538247707,1.34864346384821,1.98368293740806,1.30877970992015,2.59229946583586,0.621339313086926,0,2.24274819065968,1.48912641411388,1.36115831840833,0.645799117388655,1.520605129417,1.64300134104056,0.5208175393758,0.314578033277133,0,0,0,1.01362607645082,1.02710957164827,0.77952493786677,0.716106782669926,0,0.360586348559907,0.147689527174577,0.302899349844443,0.228620419965,0.201652370273681,0,0,0.233753804363138,0.453460767230423,0,0,0,0.386379188064381,0.187682475451182,0.915758121336325,1.92931541171159,0.501572104035363,0,1.38097570952153,1.14579102687879,0.515559547031063,0.685082519770642,0,1.35004500046361,0,0.453142408984205,0,1.55681021376265,4.38927360741134,1.87806966329548,0.972426868273176,0.419226325255965,1.10306105070008,1.33348036680969,0.824140228955577,0.64183841918363,0.505394423527595,1.01391719956096,1.32038438970253,1.21733959710847,1.15245274328765,1.09127391015665,3.33405583898152,1.27472758539341,0.964546102318525,0.412085900803307,1.91358596174717,0.685738504770831,1.06485483695602,1.66905332963125,0.8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| |||
|short_description=p3@Cachd1 | |||
}} | |||
Revision as of 03:13, 14 September 2013
| Short description: | p3@Cachd1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_Cachd1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 115bp_to_NM_198037, uc008tvg.1, uc008tvh.1_5end |
| EntrezGene: | Cachd1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| cavitated compound organ | 3.40e-07 | 21 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
