FFCP PHASE1:Mm9::chr4:117521966..117521980,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14664|HGNC=|MCL_coexpression_id=20|UniProt=E9Q3V0|association_with_transcript=0bp_to_ENSMUST00000163288_5end|description=CAGE_peak_9_at_Slc6a9_5end|id=chr4:117521966..117521980,+|ontology_enrichment_celltype=CL:0000117!3.52e-10!23;CL:0000337!3.52e-10!23|ontology_enrichment_celltype_v019_2=CL:0000117,2.41e-15,23;CL:0000337,2.41e-15,23;CL:0002610,5.66e-11,3;CL:0002614,6.11e-11,3;CL:0000540,4.57e-10,33;CL:0000047,4.57e-10,33;CL:0000031,4.57e-10,33;CL:0000404,4.57e-10,33;CL:0002612,9.90e-10,3;CL:0000393,3.34e-08,39;CL:0000211,3.34e-08,39;CL:0002611,1.96e-07,2;CL:0002319,2.98e-07,43;CL:0000221,4.84e-07,44;CL:0000133,4.84e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.37e-21!52;UBERON:0005068!1.37e-21!52;UBERON:0006241!1.37e-21!52;UBERON:0007135!1.37e-21!52;UBERON:0001017!4.45e-21!73;UBERON:0005743!4.45e-21!73;UBERON:0000033!6.28e-21!63;UBERON:0000073!3.56e-20!75;UBERON:0001016!3.56e-20!75;UBERON:0002346!5.81e-20!71;UBERON:0003075!5.81e-20!71;UBERON:0007284!5.81e-20!71;UBERON:0000955!1.57e-19!50;UBERON:0006238!1.57e-19!50;UBERON:0002616!1.56e-18!49;UBERON:0004121!2.88e-17!102;UBERON:0000924!2.88e-17!102;UBERON:0006601!2.88e-17!102;UBERON:0002020!3.39e-16!34;UBERON:0003056!1.98e-14!49;UBERON:0003076!3.08e-13!12;UBERON:0003057!3.08e-13!12;UBERON:0007811!2.91e-12!86;UBERON:0003080!3.64e-11!40;UBERON:0002791!3.93e-11!29;UBERON:0003528!3.93e-11!29;UBERON:0001893!3.93e-11!29;UBERON:0000153!2.70e-10!94;UBERON:0002780!3.02e-10!39;UBERON:0001890!3.02e-10!39;UBERON:0006240!3.02e-10!39;UBERON:0002298!1.47e-09!6;UBERON:0002240!7.49e-09!6;UBERON:0005174!7.49e-09!6;UBERON:0001137!7.49e-09!6;UBERON:0001948!1.91e-07!5;UBERON:0002315!1.91e-07!5;UBERON:0002021!3.50e-07!10;UBERON:0000411!3.50e-07!10;UBERON:0001950!3.50e-07!10;UBERON:0002420!4.90e-07!8;UBERON:0007245!4.90e-07!8;UBERON:0010009!4.90e-07!8;UBERON:0010011!4.90e-07!8;UBERON:0000454!4.90e-07!8;UBERON:0002950!8.63e-07!4;UBERON:0001891!8.63e-07!4;UBERON:0009616!8.63e-07!4;UBERON:0002619!9.07e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0003076,1.19e-25,12;UBERON:0003057,1.19e-25,12;UBERON:0000073,3.66e-25,54;UBERON:0001017,1.77e-21,73;UBERON:0001049,3.42e-21,52;UBERON:0005068,3.42e-21,52;UBERON:0006241,3.42e-21,52;UBERON:0007135,3.42e-21,52;UBERON:0001016,8.73e-21,75;UBERON:0002346,1.45e-20,64;UBERON:0003075,1.45e-20,64;UBERON:0007284,1.45e-20,64;UBERON:0002240,7.40e-19,6;UBERON:0005174,7.40e-19,6;UBERON:0001137,7.40e-19,6;UBERON:0004121,7.63e-19,95;UBERON:0000924,7.63e-19,95;UBERON:0006601,7.63e-19,95;UBERON:0010371,1.69e-17,73;UBERON:0001948,1.58e-15,5;UBERON:0002315,1.58e-15,5;UBERON:0002950,5.55e-14,4;UBERON:0001891,5.55e-14,4;UBERON:0009616,5.55e-14,4;UBERON:0010286,5.55e-14,4;UBERON:0010314,5.48e-13,92;UBERON:0000955,1.35e-12,47;UBERON:0006238,1.35e-12,47;UBERON:0002616,3.41e-11,46;UBERON:0002020,3.98e-11,34;UBERON:0004684,5.66e-11,3;UBERON:0002275,5.66e-11,3;UBERON:0002038,6.11e-11,3;UBERON:0009663,6.11e-11,3;UBERON:0009661,6.11e-11,3;UBERON:0000125,6.11e-11,3;UBERON:0002308,6.11e-11,3;UBERON:0002257,9.90e-10,3;UBERON:0004733,3.27e-09,6;UBERON:0004732,3.27e-09,6;UBERON:0002028,3.27e-09,6;UBERON:0007277,3.27e-09,6;UBERON:0001896,3.40e-08,2;UBERON:0002298,3.40e-08,2;UBERON:0005290,3.40e-08,2;UBERON:0010096,3.40e-08,2;UBERON:0000025,1.78e-07,114;UBERON:0002256,1.96e-07,2;UBERON:0003056,2.74e-07,49;UBERON:0002420,6.51e-07,8;UBERON:0007245,6.51e-07,8;UBERON:0010009,6.51e-07,8;UBERON:0010011,6.51e-07,8;UBERON:0000454,6.51e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0.338844532069132,0,0,0,0,0,0.768436610643109,0,0,0,6.28432165688368,3.97563373712904,0,0,0,9.91042928994498,6.89511625660014,9.83081812839958,0.131886287730194,0.0914876436024097,0,13.4007839520663,7.87867654044352,5.34793867218835,3.53554302568401,1.70846016958924,2.05039390407831,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.92780797011547,4.39838084308256,0,0,0,0,7.33974133083631,4.11750542536764,0.125654352112864,1.91206752211504,1.53429274398198,7.68815764870372,5.353961681236,0,0,0,3.57751155007006,0.130120442962704,0,0,0,0.408218994907967,0.12811372028485,0.655912071918102,13.1938719076898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47202963994889,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.9312048688647,13.3621322715112,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0,0,0,0,0,0.485561272309963,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.025932617135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0.129159823477731,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0.572895513439397,0.343706364687375,0.685082519770642,0,0.675022500231806,0.45032120322422,0.906284817968409,1.55328093525546,0,0,0.341467211508268,0,0.209613162627982,0.183843508450014,0.44449345560323,0,0,0,0,0,0.187283014939765,0.512201219238954,0.114870937911227,0,0.231768651889711,0,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0,0.0941093804153306,0.169229215783353,0.182927972872773,0,0,0,0.118635018124174,0.0985044823755635,0.409231043169689,0,0,0.249810577937946,0,0,0.191288332068843,0.220591419119515,0.231867835620421|short_description=p9@Slc6a9}} | ||
|EntrezGene=14664 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|UniProt=E9Q3V0 | |||
|association_with_transcript=0bp_to_ENSMUST00000163288_5end | |||
|description=CAGE_peak_9_at_Slc6a9_5end | |||
|id=chr4:117521966..117521980,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.52e-10!23;CL:0000337!3.52e-10!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.41e-15,23;CL:0000337,2.41e-15,23;CL:0002610,5.66e-11,3;CL:0002614,6.11e-11,3;CL:0000540,4.57e-10,33;CL:0000047,4.57e-10,33;CL:0000031,4.57e-10,33;CL:0000404,4.57e-10,33;CL:0002612,9.90e-10,3;CL:0000393,3.34e-08,39;CL:0000211,3.34e-08,39;CL:0002611,1.96e-07,2;CL:0002319,2.98e-07,43;CL:0000221,4.84e-07,44;CL:0000133,4.84e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.37e-21!52;UBERON:0005068!1.37e-21!52;UBERON:0006241!1.37e-21!52;UBERON:0007135!1.37e-21!52;UBERON:0001017!4.45e-21!73;UBERON:0005743!4.45e-21!73;UBERON:0000033!6.28e-21!63;UBERON:0000073!3.56e-20!75;UBERON:0001016!3.56e-20!75;UBERON:0002346!5.81e-20!71;UBERON:0003075!5.81e-20!71;UBERON:0007284!5.81e-20!71;UBERON:0000955!1.57e-19!50;UBERON:0006238!1.57e-19!50;UBERON:0002616!1.56e-18!49;UBERON:0004121!2.88e-17!102;UBERON:0000924!2.88e-17!102;UBERON:0006601!2.88e-17!102;UBERON:0002020!3.39e-16!34;UBERON:0003056!1.98e-14!49;UBERON:0003076!3.08e-13!12;UBERON:0003057!3.08e-13!12;UBERON:0007811!2.91e-12!86;UBERON:0003080!3.64e-11!40;UBERON:0002791!3.93e-11!29;UBERON:0003528!3.93e-11!29;UBERON:0001893!3.93e-11!29;UBERON:0000153!2.70e-10!94;UBERON:0002780!3.02e-10!39;UBERON:0001890!3.02e-10!39;UBERON:0006240!3.02e-10!39;UBERON:0002298!1.47e-09!6;UBERON:0002240!7.49e-09!6;UBERON:0005174!7.49e-09!6;UBERON:0001137!7.49e-09!6;UBERON:0001948!1.91e-07!5;UBERON:0002315!1.91e-07!5;UBERON:0002021!3.50e-07!10;UBERON:0000411!3.50e-07!10;UBERON:0001950!3.50e-07!10;UBERON:0002420!4.90e-07!8;UBERON:0007245!4.90e-07!8;UBERON:0010009!4.90e-07!8;UBERON:0010011!4.90e-07!8;UBERON:0000454!4.90e-07!8;UBERON:0002950!8.63e-07!4;UBERON:0001891!8.63e-07!4;UBERON:0009616!8.63e-07!4;UBERON:0002619!9.07e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003076,1.19e-25,12;UBERON:0003057,1.19e-25,12;UBERON:0000073,3.66e-25,54;UBERON:0001017,1.77e-21,73;UBERON:0001049,3.42e-21,52;UBERON:0005068,3.42e-21,52;UBERON:0006241,3.42e-21,52;UBERON:0007135,3.42e-21,52;UBERON:0001016,8.73e-21,75;UBERON:0002346,1.45e-20,64;UBERON:0003075,1.45e-20,64;UBERON:0007284,1.45e-20,64;UBERON:0002240,7.40e-19,6;UBERON:0005174,7.40e-19,6;UBERON:0001137,7.40e-19,6;UBERON:0004121,7.63e-19,95;UBERON:0000924,7.63e-19,95;UBERON:0006601,7.63e-19,95;UBERON:0010371,1.69e-17,73;UBERON:0001948,1.58e-15,5;UBERON:0002315,1.58e-15,5;UBERON:0002950,5.55e-14,4;UBERON:0001891,5.55e-14,4;UBERON:0009616,5.55e-14,4;UBERON:0010286,5.55e-14,4;UBERON:0010314,5.48e-13,92;UBERON:0000955,1.35e-12,47;UBERON:0006238,1.35e-12,47;UBERON:0002616,3.41e-11,46;UBERON:0002020,3.98e-11,34;UBERON:0004684,5.66e-11,3;UBERON:0002275,5.66e-11,3;UBERON:0002038,6.11e-11,3;UBERON:0009663,6.11e-11,3;UBERON:0009661,6.11e-11,3;UBERON:0000125,6.11e-11,3;UBERON:0002308,6.11e-11,3;UBERON:0002257,9.90e-10,3;UBERON:0004733,3.27e-09,6;UBERON:0004732,3.27e-09,6;UBERON:0002028,3.27e-09,6;UBERON:0007277,3.27e-09,6;UBERON:0001896,3.40e-08,2;UBERON:0002298,3.40e-08,2;UBERON:0005290,3.40e-08,2;UBERON:0010096,3.40e-08,2;UBERON:0000025,1.78e-07,114;UBERON:0002256,1.96e-07,2;UBERON:0003056,2.74e-07,49;UBERON:0002420,6.51e-07,8;UBERON:0007245,6.51e-07,8;UBERON:0010009,6.51e-07,8;UBERON:0010011,6.51e-07,8;UBERON:0000454,6.51e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0.338844532069132,0,0,0,0,0,0.768436610643109,0,0,0,6.28432165688368,3.97563373712904,0,0,0,9.91042928994498,6.89511625660014,9.83081812839958,0.131886287730194,0.0914876436024097,0,13.4007839520663,7.87867654044352,5.34793867218835,3.53554302568401,1.70846016958924,2.05039390407831,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.92780797011547,4.39838084308256,0,0,0,0,7.33974133083631,4.11750542536764,0.125654352112864,1.91206752211504,1.53429274398198,7.68815764870372,5.353961681236,0,0,0,3.57751155007006,0.130120442962704,0,0,0,0.408218994907967,0.12811372028485,0.655912071918102,13.1938719076898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47202963994889,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.9312048688647,13.3621322715112,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0,0,0,0,0,0.485561272309963,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.025932617135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0.129159823477731,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0.572895513439397,0.343706364687375,0.685082519770642,0,0.675022500231806,0.45032120322422,0.906284817968409,1.55328093525546,0,0,0.341467211508268,0,0.209613162627982,0.183843508450014,0.44449345560323,0,0,0,0,0,0.187283014939765,0.512201219238954,0.114870937911227,0,0.231768651889711,0,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0,0.0941093804153306,0.169229215783353,0.182927972872773,0,0,0,0.118635018124174,0.0985044823755635,0.409231043169689,0,0,0.249810577937946,0,0,0.191288332068843,0.220591419119515,0.231867835620421 | |||
|short_description=p9@Slc6a9 | |||
}} |
Revision as of 03:34, 14 September 2013
Short description: | p9@Slc6a9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Slc6a9_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 0bp_to_ENSMUST00000163288_5end |
EntrezGene: | Slc6a9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.41e-15 | 23 |
neuroblast (sensu Vertebrata) | 2.41e-15 | 23 |
raphe nuclei neuron | 5.66e-11 | 3 |
neuron of the substantia nigra | 6.11e-11 | 3 |
neuron | 4.57e-10 | 33 |
neuronal stem cell | 4.57e-10 | 33 |
neuroblast | 4.57e-10 | 33 |
electrically signaling cell | 4.57e-10 | 33 |
neuron of the ventral spinal cord | 9.90e-10 | 3 |
electrically responsive cell | 3.34e-08 | 39 |
electrically active cell | 3.34e-08 | 39 |
neuron of the dorsal spinal cord | 1.96e-07 | 2 |
neural cell | 2.98e-07 | 43 |
ectodermal cell | 4.84e-07 | 44 |
neurectodermal cell | 4.84e-07 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.