FFCP PHASE1:Hg19::chr8:134260979..134261020,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10397|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=7679|TSSclassifier=W|UniProt=|association_with_transcript=475bp_to_BX648361_5end|coexpression_cluster_id=C862|description=CAGE_peak_6_at_NDRG1_5end|id=chr8:134260979..134261020,-|ontology_enrichment_celltype=CL:0002057!9.04e-08!42;CL:0000860!1.83e-07!45|ontology_enrichment_celltype_v019=CL:0000860;2.65e-13;33!CL:0002057;2.65e-13;33!CL:0000473;2.11e-08;39!CL:0000234;2.11e-08;39!CL:0002368;1.86e-07;13|ontology_enrichment_celltype_v019_2=CL:0000860,1.64e-10,42;CL:0002057,1.64e-10,42;CL:0000473,9.11e-09,48;CL:0000234,9.11e-09,48;CL:0002368,1.67e-07,13;CL:0002076,3.31e-07,42|ontology_enrichment_development_v019=CL:0002057;4.23e-08;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!3.32e-08!115;UBERON:0000062!1.14e-07!511|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0.363356758541113,0.856402095563933,0.422863212287913,0,0.446961094427288,0,0,1.26343974685366,0.522371256399677,0,0,0.218441372130172,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,1.83884244895785,0.90361775633475,2.9580320813343,0,0,0.293600439334847,0,0,0,0,0,0,0.872389432677388,0.377875943688809,0.970336244751265,1.16214518452842,1.23350366406548,0.619412741790207,1.43846196161075,1.0246428261164,0,0.344745680736619,0.645484683583826,1.35426486594342,1.50593871634084,1.63743690034707,0.449446968890169,2.44867113896722,1.28371610830437,1.27867425159808,0.989553900560148,2.79249120670285,0.426224750532694,0.580418477257168,0,1.24564449799115,1.25624332628372,1.5644487552606,0.434377689410233,0.605399502633369,1.10483290796269,0,0,0.212604299965044,0.419317291016752,0.22465726229299,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0.651844533267181,0,0,0.111410456885174,0,0,0,0.384273959177026,0.260118695119756,0.164437904603676,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0,0,0,0.670700859703636,0.12786256184353,0,0,0.579386075843295,0,0.973269740605272,0,0,0,0.261958150995425,0,1.48313777113772,0,0,0.26591592103773,0.715471872916026,0,0,0,0,0,0,0.419499436209906,0,0.208994966536811,0,0,0,0.805658634218294,1.52054421143703,0.24406205754817,0,0,0,0,0,0,0,0.183201743930407,0,0,2.18047026071267,1.49091585508596,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0.576175924479999,0,0.624320153660641,0.570471821544449,0.149448680551801,0.23486899728753,0,0.140450806702248,0,0,0.103325781175765,0,0.247266929278557,1.82032272387605,0,0,0.250237039743928,0,0,0,0.300476117813194,0,0,0.213557388818567,0.211931901159562,0,0.309157587715317,0,0.18611685633159,0.168776332241266,0.0974370051611986,0.252433774244115,0.0920498986422993,0.161646056818812,0,0.302256294682921,0.339121184620975,0.773043412653187,0,0.573609190778008,0,0,0.348581828608555,0.518305275076852,0.252320850875628,0,0,0.643240938192885,0,0,0,0.236613600079688,0.337169380156203,0,0.441175890929576,0.435758888184812,1.42362371466658,0.404493924480493,0,0.769494313892781,0,0,0,0,0,0,0,0,0,0,1.53650399572076,4.49607013030478,0.904760751704678,0.648119116109707,0,0,0,0,0,0.288732895522148,0,0.570762456703795,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.626909658919938,1.45316969256981,1.91691339582606,0,0.088048434013226,0,0.288239906833923,0.12624243342638,0.063497894292169,0.381988425558278,0,3.4214489204541,0.102827492703324,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.410952645100767,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0.415941723061614,0.713715955188647,0,0.117141414992713,0,0,1.03473071292505,0,0.368738337083406,0,0,0,0,0.215714200818617,0.213455115606889,0,0,0.907170879989041,0.248107807818777,0.153461973288062,1.12264037773229,0.640695746278505,0,0.160853921143607,0,0.154209693802656,1.06537035187876,0.574890092096664,0.519254429183621,0.232420756919918,0,3.80962293576241,6.99815515912812,0,0,0.262248829918848,0,0.0770153371044148,0,0,0,1.13733384070897,0.340187410553031,0,0,0,0,0.254876273045038,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0.0915694648183434,0,0,0.650060246036521,1.6068392984416,0.096670718292122,0,0,0,0.107420244868274,0.145016693914229,0.0852266274161009,0,3.8015530533025,2.69066094311149,0.893288987462089,7.28336022159959,0.464845549297286,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0.318203247925937,0.78494864019923,0,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0.354761064070598,0.633322905892992,0.987884678879706,0,0,0.865999014529609,0.670302275535787,1.08890984861323,0,0.86101074534246,3.36942951335251,8.42517291719684,0.229723400206959,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0.324621940274555,0.280797178113459,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10397 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=7679 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=475bp_to_BX648361_5end | |||
|coexpression_cluster_id=C862 | |||
|description=CAGE_peak_6_at_NDRG1_5end | |||
|id=chr8:134260979..134261020,- | |||
|ontology_enrichment_celltype=CL:0002057!9.04e-08!42;CL:0000860!1.83e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.65e-13;33!CL:0002057;2.65e-13;33!CL:0000473;2.11e-08;39!CL:0000234;2.11e-08;39!CL:0002368;1.86e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.64e-10,42;CL:0002057,1.64e-10,42;CL:0000473,9.11e-09,48;CL:0000234,9.11e-09,48;CL:0002368,1.67e-07,13;CL:0002076,3.31e-07,42 | |||
|ontology_enrichment_development_v019=CL:0002057;4.23e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.32e-08!115;UBERON:0000062!1.14e-07!511 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p6@NDRG1 | |||
}} |
Revision as of 03:52, 14 September 2013
Short description: | p6@NDRG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_NDRG1_5end |
Coexpression cluster: | C862_renal_Urothelial_Small_Esophageal_colon_Prostate_amniotic |
Association with transcript: | 475bp_to_BX648361_5end |
EntrezGene: | NDRG1 |
HGNC: | 7679 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.64e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.64e-10 | 42 |
defensive cell | 9.11e-09 | 48 |
phagocyte | 9.11e-09 | 48 |
respiratory epithelial cell | 1.67e-07 | 13 |
endo-epithelial cell | 3.31e-07 | 42 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.