FFCP PHASE1:Mm9::chr4:141137304..141137310,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:141137304..141137310,-|id=chr4:141137304..141137310,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002679,2.05e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003103!4.28e-09!43;UBERON:0007100!3.40e-08!18;UBERON:0000948!3.40e-08!18;UBERON:0005498!3.40e-08!18;UBERON:0004140!3.40e-08!18;UBERON:0009881!3.40e-08!18;UBERON:0004141!3.40e-08!18;UBERON:0003084!3.40e-08!18;UBERON:0007005!3.40e-08!18;UBERON:0004139!3.40e-08!18;UBERON:0004291!3.40e-08!18;UBERON:0004872!1.53e-07!33;UBERON:0004535!4.67e-07!23;UBERON:0001009!4.67e-07!23;UBERON:0003133!7.30e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0004535,9.59e-10,23;UBERON:0001009,9.59e-10,23;UBERON:0007100,5.20e-09,18;UBERON:0000948,5.20e-09,18;UBERON:0005498,5.20e-09,18;UBERON:0004140,5.20e-09,18;UBERON:0009881,5.20e-09,18;UBERON:0004141,5.20e-09,18;UBERON:0003084,5.20e-09,18;UBERON:0007005,5.20e-09,18;UBERON:0004139,5.20e-09,18;UBERON:0004291,5.20e-09,18;UBERON:0004872,6.55e-09,33|phase1_expression=0.320297694209588,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.771778308107841,1.14613375975503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0.191690942036473,0,0,0,0,0.263772575460388,0.182975287204819,0,0,0,0,0,0,0.186399445825301,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0,0.505524445014783,0.22836775943812,0,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0,1.01219549843938,0,0.323533699894818,0.220841518460394,0,0,0,0.209446706813455,0.255457055208591,0,0,0,0,0,0.125654352112864,0,0,0,0,0.305518091550949,0.248813941220186,0.252722758433675,0,0.130120442962704,0.459804208866946,0,0.150704817835715,0,0,0.187403449119458,0,0,0,0.175951124163949,0,0,0,0,1.19420560091096,0,0,0,0.207125772535502,0.234526059981096,0.36012412292203,0.23674473558521,0.196764231747404,0.771335564436891,0.465067889500816,0.268273401399619,0.116765342367169,0.329119699826961,1.97000956894914,1.37816976227955,2.04679982395465,1.3173006917463,0.536825675041487,0,0.102904612379284,0,0,1.06644125267617,0.928946687441754,0.257734922644187,0.403367049246685,0.444756087689741,0,0,0,0.502670417600539,0.198956472041151,0.58489226135736,1.79763881730844,0.648414149624083,0.398282546508734,0.189667900953082,0.913988100877831,1.1270773567308,0.203651327845314,0.581857461502877,0.0701358198903186,0.126473074248515,0.738050739898011,0.156998727841375,0.123397163921801,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0.169745085775188,0.234690248288502,0.335012514883631,0,0.195133647857799,0.315270288212382,0.664394068946325,0.478364305972461,0.81931657357869,0.690739927463582,0.578596234326046,1.50791283939272,0.54390568381871,0.491764273019036,0,0,0,0,0,0.315508219416257,0.390438744296638,0.430846795465598,0.238968797952552,0.445597348164788,0.283076530788832,0,0.292255857911312,0,0,0,0.890328018336276,0.488660878060728,0.329940245945071,0,0,0,0.565815239267694,0,0,0,0,0,0.316036757935816,0,0,0,0.18006109403131,0.517434735131018,0.428674070063185,0.709360934569094,0,0.164549020602121,0.304464949114599,0.23467170806371,1.0591603543191,0,0.16488625294148,0,0.0603129249281559,0.119372344003136,0.164140899745061,0.582961673259701,0,0,0.206386867963223,0.370389054739423,0,0,0.228778173206523,0,0,0,0,0.632671987162271,0.203319467126849,0.216010681643603,0,0.436725127492355,0.404593039154462,0.247960367176008,1.30877970992015,0,0.621339313086926,0,0.448549638131936,0.330916980914195,0.777804753376191,0.129159823477731,1.01373675294467,0.469428954583016,0.651021924219751,0.314578033277133,0.483168241652012,0,0,0,0.308132871494482,0,0.179026695667481,0,0.240390899039938,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0.772758376128762,0.187682475451182,0.36630324853453,0.214368379079066,0,0.564751842617067,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.512200817262403,0.243106717068294,0,0,0.222246727801615,0,0,0,0.25347929989024,0,0.187283014939765,0,0.114870937911227,0,0.115884325944855,0.38581844092741,0,0.441596760403192,0,0.354951612318675,0.476872379894642,0.145346416632329,0,0.25384382367503,0,0,0,0,0,0.0985044823755635,0.409231043169689,0.154936841185966,0,0,0,0,0.191288332068843,0.441182838239031,0|short_description=p@chr4:141137304..141137310,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:141137304..141137310,- | |||
|id=chr4:141137304..141137310,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002679,2.05e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003103!4.28e-09!43;UBERON:0007100!3.40e-08!18;UBERON:0000948!3.40e-08!18;UBERON:0005498!3.40e-08!18;UBERON:0004140!3.40e-08!18;UBERON:0009881!3.40e-08!18;UBERON:0004141!3.40e-08!18;UBERON:0003084!3.40e-08!18;UBERON:0007005!3.40e-08!18;UBERON:0004139!3.40e-08!18;UBERON:0004291!3.40e-08!18;UBERON:0004872!1.53e-07!33;UBERON:0004535!4.67e-07!23;UBERON:0001009!4.67e-07!23;UBERON:0003133!7.30e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,9.59e-10,23;UBERON:0001009,9.59e-10,23;UBERON:0007100,5.20e-09,18;UBERON:0000948,5.20e-09,18;UBERON:0005498,5.20e-09,18;UBERON:0004140,5.20e-09,18;UBERON:0009881,5.20e-09,18;UBERON:0004141,5.20e-09,18;UBERON:0003084,5.20e-09,18;UBERON:0007005,5.20e-09,18;UBERON:0004139,5.20e-09,18;UBERON:0004291,5.20e-09,18;UBERON:0004872,6.55e-09,33 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.771778308107841,1.14613375975503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0.191690942036473,0,0,0,0,0.263772575460388,0.182975287204819,0,0,0,0,0,0,0.186399445825301,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0,0.505524445014783,0.22836775943812,0,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0,1.01219549843938,0,0.323533699894818,0.220841518460394,0,0,0,0.209446706813455,0.255457055208591,0,0,0,0,0,0.125654352112864,0,0,0,0,0.305518091550949,0.248813941220186,0.252722758433675,0,0.130120442962704,0.459804208866946,0,0.150704817835715,0,0,0.187403449119458,0,0,0,0.175951124163949,0,0,0,0,1.19420560091096,0,0,0,0.207125772535502,0.234526059981096,0.36012412292203,0.23674473558521,0.196764231747404,0.771335564436891,0.465067889500816,0.268273401399619,0.116765342367169,0.329119699826961,1.97000956894914,1.37816976227955,2.04679982395465,1.3173006917463,0.536825675041487,0,0.102904612379284,0,0,1.06644125267617,0.928946687441754,0.257734922644187,0.403367049246685,0.444756087689741,0,0,0,0.502670417600539,0.198956472041151,0.58489226135736,1.79763881730844,0.648414149624083,0.398282546508734,0.189667900953082,0.913988100877831,1.1270773567308,0.203651327845314,0.581857461502877,0.0701358198903186,0.126473074248515,0.738050739898011,0.156998727841375,0.123397163921801,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0.169745085775188,0.234690248288502,0.335012514883631,0,0.195133647857799,0.315270288212382,0.664394068946325,0.478364305972461,0.81931657357869,0.690739927463582,0.578596234326046,1.50791283939272,0.54390568381871,0.491764273019036,0,0,0,0,0,0.315508219416257,0.390438744296638,0.430846795465598,0.238968797952552,0.445597348164788,0.283076530788832,0,0.292255857911312,0,0,0,0.890328018336276,0.488660878060728,0.329940245945071,0,0,0,0.565815239267694,0,0,0,0,0,0.316036757935816,0,0,0,0.18006109403131,0.517434735131018,0.428674070063185,0.709360934569094,0,0.164549020602121,0.304464949114599,0.23467170806371,1.0591603543191,0,0.16488625294148,0,0.0603129249281559,0.119372344003136,0.164140899745061,0.582961673259701,0,0,0.206386867963223,0.370389054739423,0,0,0.228778173206523,0,0,0,0,0.632671987162271,0.203319467126849,0.216010681643603,0,0.436725127492355,0.404593039154462,0.247960367176008,1.30877970992015,0,0.621339313086926,0,0.448549638131936,0.330916980914195,0.777804753376191,0.129159823477731,1.01373675294467,0.469428954583016,0.651021924219751,0.314578033277133,0.483168241652012,0,0,0,0.308132871494482,0,0.179026695667481,0,0.240390899039938,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0.772758376128762,0.187682475451182,0.36630324853453,0.214368379079066,0,0.564751842617067,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.512200817262403,0.243106717068294,0,0,0.222246727801615,0,0,0,0.25347929989024,0,0.187283014939765,0,0.114870937911227,0,0.115884325944855,0.38581844092741,0,0.441596760403192,0,0.354951612318675,0.476872379894642,0.145346416632329,0,0.25384382367503,0,0,0,0,0,0.0985044823755635,0.409231043169689,0.154936841185966,0,0,0,0,0.191288332068843,0.441182838239031,0 | |||
|short_description=p@chr4:141137304..141137310,- | |||
}} |
Revision as of 04:20, 14 September 2013
Short description: | p@chr4:141137304..141137310, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:141137304..141137310, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural helper lymphocyte | 2.05e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 9.59e-10 | 23 |
circulatory system | 9.59e-10 | 23 |
primary circulatory organ | 5.20e-09 | 18 |
heart | 5.20e-09 | 18 |
primitive heart tube | 5.20e-09 | 18 |
primary heart field | 5.20e-09 | 18 |
anterior lateral plate mesoderm | 5.20e-09 | 18 |
heart tube | 5.20e-09 | 18 |
heart primordium | 5.20e-09 | 18 |
cardiac mesoderm | 5.20e-09 | 18 |
cardiogenic plate | 5.20e-09 | 18 |
heart rudiment | 5.20e-09 | 18 |
splanchnic layer of lateral plate mesoderm | 6.55e-09 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.