FFCP PHASE1:Mm9::chr4:3017362..3017381,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=80|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:3017362..3017381,-|id=chr4:3017362..3017381,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000553,2.81e-16,6;CL:0000556,2.81e-16,6;CL:0000050,1.35e-10,9;CL:0002027,2.62e-09,3;CL:0002006,2.62e-09,3;CL:0002024,2.62e-09,3;CL:0000839,4.25e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.48e-15,10;UBERON:0000411,1.48e-15,10;UBERON:0001950,1.48e-15,10;UBERON:0002619,1.37e-08,17;UBERON:0001474,1.55e-08,22;UBERON:0004765,1.55e-08,22;UBERON:0001434,1.55e-08,22|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0.140788722151667,0.468129052643987,0.171217968225505,0.0797721589953364,0.171200729931206,0.0874204024189974,3.99731714178795,14.3757439846776,6.99561878128147,4.73193248037357,2.87940310572051,2.97072756258621,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0,0,0,0,0,0,0,0,0,0.336093799142464,0,1.71920063963254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45839474333043,0,0,0,0.227178579999552,0.377857800533928,2.89864488701678,0,0,0,0,0.448026887097336,0,0.852151612890289,2.59786004602869,2.12003744706204,0,0,0,0,0,0,0,5.36664234679582,0.258937883647172,0,0,0,0,0,0.352766121407114,0,0.247194967734374,0.433798070759735,0,2.91180329905337,2.42925670306433,63.0337829075789,1.86391761218122,0.292780797011547,0.209446706813455,0.255457055208591,0,0,0,0,0,0.251308704225729,0,0,0,0,0.509196819251581,0,0,0.841767423545896,0.390361328888111,0,0,0.30140963567143,0.612328492361951,0.2562274405697,0.749613796477831,1.81092359517311,0,0.378212160335639,0,0,0,0.696504333044333,0.205782136407943,0,0,0,0,0.414251545071004,0.234526059981096,0.720248245844059,0,0,0.462801338662135,0.697601834251224,0,3.26942958628075,0,1.80584210487005,0.162137619091711,0.146199987425332,0,0.134206418760372,0,0,0,0,0,1.39342003116263,0.128867461322093,0.403367049246685,0.22237804384487,0,0,0,1.00534083520108,0.994782360205754,0.38992817423824,0,0.216138049874694,0.199141273254367,0.189667900953082,0.228497025219458,0,0.203651327845314,0.387904974335251,0.98190147846446,0.316182685621286,0,0,0,0,0.166845105716094,0,0.674586337154561,0,0,0,0,0.486405680325106,0.274561413188081,0,0.372140947668503,0.624075346229121,0,0,0,0,0,0.325929952884052,0.509235257325564,0.234690248288502,0,0.238043640886014,0.195133647857799,0.157635144106191,0.8858587585951,0.478364305972461,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0.551873492609465,0,0.117211686592203,0.163934945376675,0.504941854408746,0.94652465824877,0.780877488593277,0.861693590931196,0.477937595905104,0.222798674082394,0,0.404810701674894,0,0,0.321321316421807,0.141940085208269,0.35613120733451,0,0.494910368917606,0,0,0,0.188605079755898,0.295301892880773,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0.177340233642274,0,0,0,0.938686832254841,0,0.220528398054962,3.95727007059552,0.807322133479528,0.482503399425247,0,0.328281799490123,0,0,0,0,1.11116716421827,0.376736914009382,0.410082683163076,0.457556346413045,0,0,0,4.77335309007557,0,0.406638934253697,0.108005340821801,1.25452977608681,0,1.75323650300267,0,0,0,2.4853572523477,0,0,0,0.194451188344048,0,0.168956125490778,0.352071715937262,0.13020438484395,0,0,0,0.316011120628178,0.202725215290164,0,0.129920822977795,0.179026695667481,0.596044064343795,0,0.147689527174577,0.302899349844443,0.609654453239999,0,0.974578807397524,0.384847366561318,0.116876902181569,0,0,0,0,0,0,0.915758121336325,0.857473516316263,0,5.0827665835536,3.22227665555024,5.15605962095457,5.15559547031063,1.37016503954128,2.2661816921691,3.37511250115903,1.35096360967266,0,0,0.830298780673413,0,0,2.18796045361465,0,0.183843508450014,0,0.412070114477788,0.64183841918363,0,0.50695859978048,0.377252682772152,0.561849044819294,0.128050304809739,0.114870937911227,0,0.231768651889711,0,0,0.294397840268795,0.342869252385415,0.354951612318675,0.238436189947321,0.436039249896986,0.0941093804153306,0.338458431566706,0.182927972872773,0.526139422875686,0.271608227691724,0.561142271657738,0.118635018124174,0.394017929502254,0.818462086339379,0.154936841185966,0.385813221962283,0.499621155875892,0,0.859484216193193,1.53030665655075,0.441182838239031,0|short_description=p@chr4:3017362..3017381,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=80 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:3017362..3017381,- | |||
|id=chr4:3017362..3017381,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,2.81e-16,6;CL:0000556,2.81e-16,6;CL:0000050,1.35e-10,9;CL:0002027,2.62e-09,3;CL:0002006,2.62e-09,3;CL:0002024,2.62e-09,3;CL:0000839,4.25e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.48e-15,10;UBERON:0000411,1.48e-15,10;UBERON:0001950,1.48e-15,10;UBERON:0002619,1.37e-08,17;UBERON:0001474,1.55e-08,22;UBERON:0004765,1.55e-08,22;UBERON:0001434,1.55e-08,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0.140788722151667,0.468129052643987,0.171217968225505,0.0797721589953364,0.171200729931206,0.0874204024189974,3.99731714178795,14.3757439846776,6.99561878128147,4.73193248037357,2.87940310572051,2.97072756258621,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0,0,0,0,0,0,0,0,0,0.336093799142464,0,1.71920063963254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45839474333043,0,0,0,0.227178579999552,0.377857800533928,2.89864488701678,0,0,0,0,0.448026887097336,0,0.852151612890289,2.59786004602869,2.12003744706204,0,0,0,0,0,0,0,5.36664234679582,0.258937883647172,0,0,0,0,0,0.352766121407114,0,0.247194967734374,0.433798070759735,0,2.91180329905337,2.42925670306433,63.0337829075789,1.86391761218122,0.292780797011547,0.209446706813455,0.255457055208591,0,0,0,0,0,0.251308704225729,0,0,0,0,0.509196819251581,0,0,0.841767423545896,0.390361328888111,0,0,0.30140963567143,0.612328492361951,0.2562274405697,0.749613796477831,1.81092359517311,0,0.378212160335639,0,0,0,0.696504333044333,0.205782136407943,0,0,0,0,0.414251545071004,0.234526059981096,0.720248245844059,0,0,0.462801338662135,0.697601834251224,0,3.26942958628075,0,1.80584210487005,0.162137619091711,0.146199987425332,0,0.134206418760372,0,0,0,0,0,1.39342003116263,0.128867461322093,0.403367049246685,0.22237804384487,0,0,0,1.00534083520108,0.994782360205754,0.38992817423824,0,0.216138049874694,0.199141273254367,0.189667900953082,0.228497025219458,0,0.203651327845314,0.387904974335251,0.98190147846446,0.316182685621286,0,0,0,0,0.166845105716094,0,0.674586337154561,0,0,0,0,0.486405680325106,0.274561413188081,0,0.372140947668503,0.624075346229121,0,0,0,0,0,0.325929952884052,0.509235257325564,0.234690248288502,0,0.238043640886014,0.195133647857799,0.157635144106191,0.8858587585951,0.478364305972461,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0.551873492609465,0,0.117211686592203,0.163934945376675,0.504941854408746,0.94652465824877,0.780877488593277,0.861693590931196,0.477937595905104,0.222798674082394,0,0.404810701674894,0,0,0.321321316421807,0.141940085208269,0.35613120733451,0,0.494910368917606,0,0,0,0.188605079755898,0.295301892880773,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0.177340233642274,0,0,0,0.938686832254841,0,0.220528398054962,3.95727007059552,0.807322133479528,0.482503399425247,0,0.328281799490123,0,0,0,0,1.11116716421827,0.376736914009382,0.410082683163076,0.457556346413045,0,0,0,4.77335309007557,0,0.406638934253697,0.108005340821801,1.25452977608681,0,1.75323650300267,0,0,0,2.4853572523477,0,0,0,0.194451188344048,0,0.168956125490778,0.352071715937262,0.13020438484395,0,0,0,0.316011120628178,0.202725215290164,0,0.129920822977795,0.179026695667481,0.596044064343795,0,0.147689527174577,0.302899349844443,0.609654453239999,0,0.974578807397524,0.384847366561318,0.116876902181569,0,0,0,0,0,0,0.915758121336325,0.857473516316263,0,5.0827665835536,3.22227665555024,5.15605962095457,5.15559547031063,1.37016503954128,2.2661816921691,3.37511250115903,1.35096360967266,0,0,0.830298780673413,0,0,2.18796045361465,0,0.183843508450014,0,0.412070114477788,0.64183841918363,0,0.50695859978048,0.377252682772152,0.561849044819294,0.128050304809739,0.114870937911227,0,0.231768651889711,0,0,0.294397840268795,0.342869252385415,0.354951612318675,0.238436189947321,0.436039249896986,0.0941093804153306,0.338458431566706,0.182927972872773,0.526139422875686,0.271608227691724,0.561142271657738,0.118635018124174,0.394017929502254,0.818462086339379,0.154936841185966,0.385813221962283,0.499621155875892,0,0.859484216193193,1.53030665655075,0.441182838239031,0 | |||
|short_description=p@chr4:3017362..3017381,- | |||
}} |
Revision as of 04:48, 14 September 2013
Short description: | p@chr4:3017362..3017381, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:3017362..3017381, - |
Coexpression cluster: | MCL_coexpression_mm9:80 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 2.81e-16 | 6 |
megakaryocyte | 2.81e-16 | 6 |
megakaryocyte-erythroid progenitor cell | 1.35e-10 | 9 |
CD9-positive, CD41-positive megakaryocyte cell | 2.62e-09 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 2.62e-09 | 3 |
Kit-positive megakaryocyte progenitor cell | 2.62e-09 | 3 |
myeloid lineage restricted progenitor cell | 4.25e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.48e-15 | 10 |
visual cortex | 1.48e-15 | 10 |
neocortex | 1.48e-15 | 10 |
regional part of cerebral cortex | 1.37e-08 | 17 |
bone element | 1.55e-08 | 22 |
skeletal element | 1.55e-08 | 22 |
skeletal system | 1.55e-08 | 22 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.