FFCP PHASE1:Mm9::chr4:59447201..59447242,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1795|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:59447201..59447242,+|id=chr4:59447201..59447242,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003102!5.41e-08!23;UBERON:0001008!1.62e-07!17;UBERON:0000014!6.98e-07!5;UBERON:0001003!6.98e-07!5;UBERON:0002097!6.98e-07!5;UBERON:0002199!6.98e-07!5;UBERON:0007029!6.98e-07!5;UBERON:0007376!6.98e-07!5;UBERON:0002416!6.98e-07!5;UBERON:0007383!6.98e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0000014,2.05e-21,5;UBERON:0001003,2.05e-21,5;UBERON:0002097,2.05e-21,5;UBERON:0002199,2.05e-21,5;UBERON:0007029,2.05e-21,5;UBERON:0007376,2.05e-21,5;UBERON:0002416,2.05e-21,5;UBERON:0007383,2.05e-21,5;UBERON:0003102,4.49e-18,22;UBERON:0000945,5.86e-12,16;UBERON:0010039,5.86e-12,16;UBERON:0000161,1.38e-08,5;UBERON:0000162,8.29e-07,3;UBERON:0001353,8.29e-07,3;UBERON:0000163,8.29e-07,3;UBERON:0006866,8.29e-07,3;UBERON:0001046,8.29e-07,3;UBERON:0000164,8.29e-07,3;UBERON:0000931,8.29e-07,3;UBERON:0003100,9.77e-07,11|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.746441823660558,1.76905930903572,0.420883711772948,0,0,0,0.150704817835715,0.0680364991513279,0,0,0.258703370739016,0.215567992932842,0.189106080167819,0.175951124163949,0.219195732427575,0.834141747676794,1.39300866608867,2.05782136407943,0.199034266818493,0,0,0.284163499395593,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0.581857461502877,0.280543279561274,0.632365371242573,0.738050739898011,0.470996183524124,0.123397163921801,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469380496577004,0.670025029767263,0,0,0,0.221464689648775,0,0.163863314715738,0,0,0,0,0.983528546038072,2.75936746304733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.178065603667255,0,2.14461159864296,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.129358683782755,0,0.354680467284547,0.178368817602071,0,0.304464949114599,0,0,0,9.8931751764888,1.45317984026315,1.68876189798836,1.43246812803764,4.92422699235184,0,0,0,0,0,0,0.136694227721025,0,0,0,0,1.90934123603023,0.158167996790568,1.01659733563424,1.40406943068342,2.71814784818809,2.18362563746178,1.75323650300267,0.247960367176008,1.30877970992015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0.51968329191118,0,0,0.120195449519969,0,0.100966449948148,0,0.100826185136841,0,0,0.116876902181569,3.40095575422817,0,0,0,1.9318959403219,0.187682475451182,6.59345847362154,4.71610433973945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0,0,0.367687016900028,0.222246727801615,0,0.64183841918363,0,0.25347929989024,0.188626341386076,0.187283014939765,0.0640251524048693,0.0574354689556133,0.476293691283074,0.231768651889711,0,0,0,0.342869252385415,0.354951612318675,0.238436189947321,0,0,0.0846146078916765,0.182927972872773,0.526139422875686,0.135804113845862,0.561142271657738,0.118635018124174,0,0.409231043169689,0.154936841185966,0.385813221962283,0.249810577937946,0.467863216890817,0.429742108096597,0.382576664137687,0.441182838239031,0|short_description=p@chr4:59447201..59447242,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1795 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:59447201..59447242,+ | |||
|id=chr4:59447201..59447242,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!5.41e-08!23;UBERON:0001008!1.62e-07!17;UBERON:0000014!6.98e-07!5;UBERON:0001003!6.98e-07!5;UBERON:0002097!6.98e-07!5;UBERON:0002199!6.98e-07!5;UBERON:0007029!6.98e-07!5;UBERON:0007376!6.98e-07!5;UBERON:0002416!6.98e-07!5;UBERON:0007383!6.98e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,2.05e-21,5;UBERON:0001003,2.05e-21,5;UBERON:0002097,2.05e-21,5;UBERON:0002199,2.05e-21,5;UBERON:0007029,2.05e-21,5;UBERON:0007376,2.05e-21,5;UBERON:0002416,2.05e-21,5;UBERON:0007383,2.05e-21,5;UBERON:0003102,4.49e-18,22;UBERON:0000945,5.86e-12,16;UBERON:0010039,5.86e-12,16;UBERON:0000161,1.38e-08,5;UBERON:0000162,8.29e-07,3;UBERON:0001353,8.29e-07,3;UBERON:0000163,8.29e-07,3;UBERON:0006866,8.29e-07,3;UBERON:0001046,8.29e-07,3;UBERON:0000164,8.29e-07,3;UBERON:0000931,8.29e-07,3;UBERON:0003100,9.77e-07,11 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.746441823660558,1.76905930903572,0.420883711772948,0,0,0,0.150704817835715,0.0680364991513279,0,0,0.258703370739016,0.215567992932842,0.189106080167819,0.175951124163949,0.219195732427575,0.834141747676794,1.39300866608867,2.05782136407943,0.199034266818493,0,0,0.284163499395593,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0.581857461502877,0.280543279561274,0.632365371242573,0.738050739898011,0.470996183524124,0.123397163921801,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469380496577004,0.670025029767263,0,0,0,0.221464689648775,0,0.163863314715738,0,0,0,0,0.983528546038072,2.75936746304733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.178065603667255,0,2.14461159864296,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.129358683782755,0,0.354680467284547,0.178368817602071,0,0.304464949114599,0,0,0,9.8931751764888,1.45317984026315,1.68876189798836,1.43246812803764,4.92422699235184,0,0,0,0,0,0,0.136694227721025,0,0,0,0,1.90934123603023,0.158167996790568,1.01659733563424,1.40406943068342,2.71814784818809,2.18362563746178,1.75323650300267,0.247960367176008,1.30877970992015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0.51968329191118,0,0,0.120195449519969,0,0.100966449948148,0,0.100826185136841,0,0,0.116876902181569,3.40095575422817,0,0,0,1.9318959403219,0.187682475451182,6.59345847362154,4.71610433973945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0,0,0.367687016900028,0.222246727801615,0,0.64183841918363,0,0.25347929989024,0.188626341386076,0.187283014939765,0.0640251524048693,0.0574354689556133,0.476293691283074,0.231768651889711,0,0,0,0.342869252385415,0.354951612318675,0.238436189947321,0,0,0.0846146078916765,0.182927972872773,0.526139422875686,0.135804113845862,0.561142271657738,0.118635018124174,0,0.409231043169689,0.154936841185966,0.385813221962283,0.249810577937946,0.467863216890817,0.429742108096597,0.382576664137687,0.441182838239031,0 | |||
|short_description=p@chr4:59447201..59447242,+ | |||
}} |
Revision as of 05:18, 14 September 2013
Short description: | p@chr4:59447201..59447242, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:59447201..59447242, + |
Coexpression cluster: | MCL_coexpression_mm9:1795 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
zone of skin | 2.05e-21 | 5 |
skin epidermis | 2.05e-21 | 5 |
skin of body | 2.05e-21 | 5 |
integument | 2.05e-21 | 5 |
surface | 2.05e-21 | 5 |
outer epithelium | 2.05e-21 | 5 |
integumental system | 2.05e-21 | 5 |
enveloping layer of ectoderm | 2.05e-21 | 5 |
surface structure | 4.49e-18 | 22 |
stomach | 5.86e-12 | 16 |
food storage organ | 5.86e-12 | 16 |
orifice | 1.38e-08 | 5 |
cloaca | 8.29e-07 | 3 |
anal region | 8.29e-07 | 3 |
embryonic cloaca | 8.29e-07 | 3 |
terminal part of digestive tract | 8.29e-07 | 3 |
hindgut | 8.29e-07 | 3 |
primitive urogenital sinus | 8.29e-07 | 3 |
proctodeum | 8.29e-07 | 3 |
female organism | 9.77e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.