FFCP PHASE1:Mm9::chr4:59489147..59489161,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=645|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:59489147..59489161,-|id=chr4:59489147..59489161,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!1.39e-13!130;UBERON:0000925!1.39e-13!130;UBERON:0006595!1.39e-13!130;UBERON:0004921!5.06e-13!126;UBERON:0004185!5.06e-13!126;UBERON:0001007!6.99e-13!128;UBERON:0001555!6.99e-13!128;UBERON:0007026!6.99e-13!128;UBERON:0003104!4.95e-10!131;UBERON:0009142!4.95e-10!131;UBERON:0000077!5.86e-10!97;UBERON:0000926!1.49e-08!193;UBERON:0004120!1.49e-08!193;UBERON:0006603!1.49e-08!193;UBERON:0001041!2.33e-08!92;UBERON:0007023!1.13e-07!51;UBERON:0009569!3.07e-07!66;UBERON:0005409!7.59e-07!59|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.40e-09,51;UBERON:0005409,1.00e-08,47;UBERON:0000160,8.66e-08,31;UBERON:0004119,1.08e-07,118;UBERON:0000925,1.08e-07,118;UBERON:0006595,1.08e-07,118;UBERON:0004921,2.47e-07,114;UBERON:0001007,4.08e-07,116;UBERON:0001555,4.08e-07,116;UBERON:0007026,4.08e-07,116|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0.234064526321993,0.171217968225505,0,0,0,0.333109761815663,0,0,0,0,0,0,0.297872853602656,0,0,0.22940928106717,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0.204169356262369,0,0,0.523523743973798,0.588231488031014,1.36609096991689,0,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0.899899717281399,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0.0755715601067855,0,0.860423876981386,0,0,0.649776417447669,0.448026887097336,0.280888840263504,0,0.259786004602869,0,0,0,0,0,0.216491041011214,0,0,0.5709193985953,3.6251303710604,0.148442139064825,0.173485326766136,0,0.461230994512117,0,0.587943535678524,0.125666591329675,5.19109432242185,1.44599356919912,0,0.485300549842228,0.441683036920787,0,1.86391761218122,0,0,4.08731288333746,0,0.599902730993408,0.127070227073065,0,0,0.125654352112864,0.173824320192276,0,0,0,0.203678727700633,0.746441823660558,0.252722758433675,0.210441855886474,0,0,0,0.150704817835715,0.204109497453984,0.384341160854549,0,0,0.431135985865684,0.189106080167819,0.351902248327898,0.43839146485515,0,0,0.411564272815887,0,0,0,0,0.207125772535502,0,0,0,0,0,0.232533944750408,0.268273401399619,0,0,0.164167464079095,0.243206428637567,0.146199987425332,0,0.268412837520744,0,0,1.65209391491899,1.85115396664481,0.213288250535234,0,0.128867461322093,0.201683524623343,0.444756087689741,0,2.37264530772256,0.164698954724011,0.502670417600539,1.39269530428806,1.36474860983384,6.29173586057955,1.29682829924817,2.58883655230677,0,0.228497025219458,1.1270773567308,0,0,0.49095073923223,0.632365371242573,0.147610147979602,0.31399745568275,0.123397163921801,0.889357881261447,0.667380422864376,0,0.449724224769707,0.608580364165509,0.241177159752417,0.25462585178142,0,9.40384315295205,0,2.87536413054709,1.86070473834252,0,0,0.179397413521912,1.4473305640901,0.369506380333209,0.189491411770485,0,0,0,0.335012514883631,0.714130922658041,0.780534591431195,0,0.664394068946325,0.478364305972461,0.327726629431476,0.172684981865896,0.289298117163023,0,0,0.491764273019036,1.65562047782839,0,0,0,0,0,0,0.430846795465598,0,0,0,0,0,0.395287777946524,0.321321316421807,0.851640511249612,0,0.325773918707152,0.329940245945071,2.65490276679926,0.242780636154981,0,0.377210159511796,0,0,0,0.727067458955011,0.712994756769443,1.26414703174326,0,0,0,0,0,0.214337035031592,0,0,0,0,0.23467170806371,1.27099242518292,0.220528398054962,0.65954501176592,2.26050197374268,0.603129249281559,0.238744688006273,0.492422699235184,3.78925087618806,0,1.53783792718067,0.412773735926445,0.370389054739423,1.50694765603753,2.87057878214153,0.915112692826091,0.169978429993855,0,0,0.954670618015114,0.474503990371703,0.203319467126849,0.216010681643603,0.209088296014469,0,0.269728692769641,0.247960367176008,0,1.03691978633434,1.24267862617385,0,0,0,0,0,0,0.117357238645754,0,0.209718688851422,0.241584120826006,0,2.52808896502543,0,0.410843828659309,0.51968329191118,0.179026695667481,1.39076948346885,0,0.147689527174577,0.201932899896295,0.533447646584999,0.504130925684203,0.682205165178267,0.481059208201647,1.28564592399726,0.453460767230423,0,0,0,0.579568782096571,0.375364950902364,1.83151624267265,3.42989406526505,2.50786052017682,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0,0,0,0,0,0,0,0,0.280924522409647,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0.644613162144895,1.3390183244819,0,0.695603506861264|short_description=p@chr4:59489147..59489161,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=645 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:59489147..59489161,- | |||
|id=chr4:59489147..59489161,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.39e-13!130;UBERON:0000925!1.39e-13!130;UBERON:0006595!1.39e-13!130;UBERON:0004921!5.06e-13!126;UBERON:0004185!5.06e-13!126;UBERON:0001007!6.99e-13!128;UBERON:0001555!6.99e-13!128;UBERON:0007026!6.99e-13!128;UBERON:0003104!4.95e-10!131;UBERON:0009142!4.95e-10!131;UBERON:0000077!5.86e-10!97;UBERON:0000926!1.49e-08!193;UBERON:0004120!1.49e-08!193;UBERON:0006603!1.49e-08!193;UBERON:0001041!2.33e-08!92;UBERON:0007023!1.13e-07!51;UBERON:0009569!3.07e-07!66;UBERON:0005409!7.59e-07!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.40e-09,51;UBERON:0005409,1.00e-08,47;UBERON:0000160,8.66e-08,31;UBERON:0004119,1.08e-07,118;UBERON:0000925,1.08e-07,118;UBERON:0006595,1.08e-07,118;UBERON:0004921,2.47e-07,114;UBERON:0001007,4.08e-07,116;UBERON:0001555,4.08e-07,116;UBERON:0007026,4.08e-07,116 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0.234064526321993,0.171217968225505,0,0,0,0.333109761815663,0,0,0,0,0,0,0.297872853602656,0,0,0.22940928106717,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0.204169356262369,0,0,0.523523743973798,0.588231488031014,1.36609096991689,0,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0.899899717281399,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0.0755715601067855,0,0.860423876981386,0,0,0.649776417447669,0.448026887097336,0.280888840263504,0,0.259786004602869,0,0,0,0,0,0.216491041011214,0,0,0.5709193985953,3.6251303710604,0.148442139064825,0.173485326766136,0,0.461230994512117,0,0.587943535678524,0.125666591329675,5.19109432242185,1.44599356919912,0,0.485300549842228,0.441683036920787,0,1.86391761218122,0,0,4.08731288333746,0,0.599902730993408,0.127070227073065,0,0,0.125654352112864,0.173824320192276,0,0,0,0.203678727700633,0.746441823660558,0.252722758433675,0.210441855886474,0,0,0,0.150704817835715,0.204109497453984,0.384341160854549,0,0,0.431135985865684,0.189106080167819,0.351902248327898,0.43839146485515,0,0,0.411564272815887,0,0,0,0,0.207125772535502,0,0,0,0,0,0.232533944750408,0.268273401399619,0,0,0.164167464079095,0.243206428637567,0.146199987425332,0,0.268412837520744,0,0,1.65209391491899,1.85115396664481,0.213288250535234,0,0.128867461322093,0.201683524623343,0.444756087689741,0,2.37264530772256,0.164698954724011,0.502670417600539,1.39269530428806,1.36474860983384,6.29173586057955,1.29682829924817,2.58883655230677,0,0.228497025219458,1.1270773567308,0,0,0.49095073923223,0.632365371242573,0.147610147979602,0.31399745568275,0.123397163921801,0.889357881261447,0.667380422864376,0,0.449724224769707,0.608580364165509,0.241177159752417,0.25462585178142,0,9.40384315295205,0,2.87536413054709,1.86070473834252,0,0,0.179397413521912,1.4473305640901,0.369506380333209,0.189491411770485,0,0,0,0.335012514883631,0.714130922658041,0.780534591431195,0,0.664394068946325,0.478364305972461,0.327726629431476,0.172684981865896,0.289298117163023,0,0,0.491764273019036,1.65562047782839,0,0,0,0,0,0,0.430846795465598,0,0,0,0,0,0.395287777946524,0.321321316421807,0.851640511249612,0,0.325773918707152,0.329940245945071,2.65490276679926,0.242780636154981,0,0.377210159511796,0,0,0,0.727067458955011,0.712994756769443,1.26414703174326,0,0,0,0,0,0.214337035031592,0,0,0,0,0.23467170806371,1.27099242518292,0.220528398054962,0.65954501176592,2.26050197374268,0.603129249281559,0.238744688006273,0.492422699235184,3.78925087618806,0,1.53783792718067,0.412773735926445,0.370389054739423,1.50694765603753,2.87057878214153,0.915112692826091,0.169978429993855,0,0,0.954670618015114,0.474503990371703,0.203319467126849,0.216010681643603,0.209088296014469,0,0.269728692769641,0.247960367176008,0,1.03691978633434,1.24267862617385,0,0,0,0,0,0,0.117357238645754,0,0.209718688851422,0.241584120826006,0,2.52808896502543,0,0.410843828659309,0.51968329191118,0.179026695667481,1.39076948346885,0,0.147689527174577,0.201932899896295,0.533447646584999,0.504130925684203,0.682205165178267,0.481059208201647,1.28564592399726,0.453460767230423,0,0,0,0.579568782096571,0.375364950902364,1.83151624267265,3.42989406526505,2.50786052017682,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0,0,0,0,0,0,0,0,0.280924522409647,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0.644613162144895,1.3390183244819,0,0.695603506861264 | |||
|short_description=p@chr4:59489147..59489161,- | |||
}} |
Revision as of 05:18, 14 September 2013
Short description: | p@chr4:59489147..59489161, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:59489147..59489161, - |
Coexpression cluster: | MCL_coexpression_mm9:645 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.40e-09 | 51 |
gastrointestinal system | 1.00e-08 | 47 |
intestine | 8.66e-08 | 31 |
endoderm-derived structure | 1.08e-07 | 118 |
endoderm | 1.08e-07 | 118 |
presumptive endoderm | 1.08e-07 | 118 |
subdivision of digestive tract | 2.47e-07 | 114 |
digestive system | 4.08e-07 | 116 |
digestive tract | 4.08e-07 | 116 |
primitive gut | 4.08e-07 | 116 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.