FFCP PHASE1:Mm9::chr5:115992915..115992946,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=19303|HGNC=|MCL_coexpression_id=359|UniProt=|association_with_transcript=0bp_to_ENSMUST00000137716_5end|description=CAGE_peak_2_at_Pxn_5end|id=chr5:115992915..115992946,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002563,2.01e-07,9;CL:0002251,2.01e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!2.74e-21!59;UBERON:0004119!5.26e-18!130;UBERON:0000925!5.26e-18!130;UBERON:0006595!5.26e-18!130;UBERON:0000160!1.08e-17!43;UBERON:0001007!2.57e-17!128;UBERON:0001555!2.57e-17!128;UBERON:0007026!2.57e-17!128;UBERON:0004921!2.75e-16!126;UBERON:0004185!2.75e-16!126;UBERON:0004923!1.89e-11!24;UBERON:0000344!5.37e-10!15;UBERON:0001242!5.77e-09!13;UBERON:0000060!5.77e-09!13;UBERON:0001262!5.77e-09!13;UBERON:0004786!5.77e-09!13|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.87e-22,47;UBERON:0000160,2.28e-18,31;UBERON:0004119,1.37e-14,118;UBERON:0000925,1.37e-14,118;UBERON:0006595,1.37e-14,118;UBERON:0001007,6.48e-14,116;UBERON:0001555,6.48e-14,116;UBERON:0007026,6.48e-14,116;UBERON:0004923,6.25e-13,24;UBERON:0004921,6.54e-13,114;UBERON:0000344,2.92e-11,15;UBERON:0001242,4.48e-10,13;UBERON:0001262,4.48e-10,13;UBERON:0004786,4.48e-10,13;UBERON:0003350,2.01e-07,9;UBERON:0004808,2.01e-07,9;UBERON:0001277,2.01e-07,9|phase1_expression=0,63.5135241903637,45.4999239389536,50.5115232882406,61.1092790534544,33.0722165666423,29.2015800744407,0,0.140788722151667,0,0,0.0797721589953364,1.54080656938085,0.262261207256992,1.99865857089398,1.61980213911861,1.39912375625629,1.10411757875383,1.50825876966313,2.12194825899015,1.78590909317247,0.198581902401771,0,26.8787270292923,20.8762445771125,44.2158612368566,34.0301976965669,39.0002931161459,35.9144262772547,24.4469225867133,22.3947815761858,0,0,0,19.0642069035841,16.1247605997738,17.3543952823014,141.882222819812,89.0722292757133,107.322367514629,209.410409739041,189.203599333489,164.10249932453,0,0,0,0,0,0,0,0,0,0.335565212115473,2.17608642603403,1.34437519656986,0.257259436035947,0.573066879877513,0,0,0,0,0,0,0.449949858640699,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0.151452386666368,0.0755715601067855,2.02905142091174,0,0,0,0,0,4.49422144421606,0,0.259786004602869,0,0.14084341977668,0,0,0,16.4533191168523,15.454951793981,18.1988800205322,6.96521666286266,0.776813650941515,0,0,0,0,0.60289056221049,0.352766121407114,0.125666591329675,8.40462890296871,0.289198713839823,22.1152637987469,2.10296904931632,3.3126227769059,6.30337829075789,22.3670113461747,0.292780797011547,0,31.9321319010739,0.958520996047362,1.19980546198682,0.635351135365324,0,0,0,0,0,0,0,0.203678727700633,8.45967400148633,10.3616330957807,2.52530227063769,0,0,0.180062129805349,0,0.0680364991513279,0,0.281105173679186,0.517406741478031,0,0,0,0,0,0.348252166522167,0,0.796137067273973,0,3.86021860672073,2.27330799516474,0,0.234526059981096,0,0,0.196764231747404,0.462801338662135,0,0,0.233530684734339,0.16455984991348,0,0.0810688095458557,0.438599962275997,0.219550115291051,0.134206418760372,0,0,64.4316626818406,32.2629691329524,0,0.232236671860439,5.67016829817211,17.5464666422308,24.4615848229357,32.7188076913602,36.0642086773829,25.3636390274977,33.4275827704358,37.2048602716952,38.2129610753476,44.0421510240569,34.5820879799511,32.0617449939531,0.189667900953082,0.114248512609729,0,1.01825663922657,1.55161989734101,1.68325967736765,1.70738650235495,2.21415221969403,1.56998727841375,1.23397163921801,0,0.166845105716094,0.982794975566015,1.79889689907883,2.43432145666204,4.82354319504834,6.87489799809833,6.61701116136864,2.91843408195064,2.74561413188081,0,2.60498663367952,1.87222603868736,0.252578877947112,0.179397413521912,0.964887042726734,4.61882975416512,0.189491411770485,0.162964976442026,0,2.81628297946203,2.68010011906905,6.9032655856944,4.09780660501378,2.20689201748667,2.87904096543407,0.637819074629948,1.80249646187312,2.93564469172023,3.47157740595628,0,0.54390568381871,4.42587845717133,3.31124095565679,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,1.84522110770749,0.890328018336276,0.488660878060728,7.9185659026817,3.98235415019888,0.485561272309963,2.11626489875326,5.65815239267694,3.83892460745005,5.84126781093462,7.75284879504663,1.81766864738753,2.49548164869305,1.26414703174326,3.16255825724996,2.06271086496374,0,0,0,0,0,0,0.164549020602121,0,3.05073220482823,4.44847348814022,7.27743713581374,0.32977250588296,0,0.0603129249281559,0.358117032009409,0,39.9328746182896,0.18542530201051,3.93003025835061,3.09580301944834,4.62986318424279,3.76736914009382,1.36694227721025,1.60144721244566,1.35982743995084,2.37917468950219,0.690999869022119,10.5013767981662,0,2.23651413839534,4.75223499615926,2.50905955217362,6.55087691238533,4.04593039154462,7.19085064810423,12.0407733312654,30.5891336968631,5.59205381778233,0.56369293868419,0,0.165458490457098,0.583353565032143,0,0.337912250981556,0.234714477291508,0.5208175393758,0.314578033277133,1.44950472495604,0.86409001877359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| ||
|EntrezGene=19303 | |||
|HGNC= | |||
|MCL_coexpression_id=359 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000137716_5end | |||
|description=CAGE_peak_2_at_Pxn_5end | |||
|id=chr5:115992915..115992946,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.01e-07,9;CL:0002251,2.01e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.74e-21!59;UBERON:0004119!5.26e-18!130;UBERON:0000925!5.26e-18!130;UBERON:0006595!5.26e-18!130;UBERON:0000160!1.08e-17!43;UBERON:0001007!2.57e-17!128;UBERON:0001555!2.57e-17!128;UBERON:0007026!2.57e-17!128;UBERON:0004921!2.75e-16!126;UBERON:0004185!2.75e-16!126;UBERON:0004923!1.89e-11!24;UBERON:0000344!5.37e-10!15;UBERON:0001242!5.77e-09!13;UBERON:0000060!5.77e-09!13;UBERON:0001262!5.77e-09!13;UBERON:0004786!5.77e-09!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.87e-22,47;UBERON:0000160,2.28e-18,31;UBERON:0004119,1.37e-14,118;UBERON:0000925,1.37e-14,118;UBERON:0006595,1.37e-14,118;UBERON:0001007,6.48e-14,116;UBERON:0001555,6.48e-14,116;UBERON:0007026,6.48e-14,116;UBERON:0004923,6.25e-13,24;UBERON:0004921,6.54e-13,114;UBERON:0000344,2.92e-11,15;UBERON:0001242,4.48e-10,13;UBERON:0001262,4.48e-10,13;UBERON:0004786,4.48e-10,13;UBERON:0003350,2.01e-07,9;UBERON:0004808,2.01e-07,9;UBERON:0001277,2.01e-07,9 | |||
|phase1_expression=0,63.5135241903637,45.4999239389536,50.5115232882406,61.1092790534544,33.0722165666423,29.2015800744407,0,0.140788722151667,0,0,0.0797721589953364,1.54080656938085,0.262261207256992,1.99865857089398,1.61980213911861,1.39912375625629,1.10411757875383,1.50825876966313,2.12194825899015,1.78590909317247,0.198581902401771,0,26.8787270292923,20.8762445771125,44.2158612368566,34.0301976965669,39.0002931161459,35.9144262772547,24.4469225867133,22.3947815761858,0,0,0,19.0642069035841,16.1247605997738,17.3543952823014,141.882222819812,89.0722292757133,107.322367514629,209.410409739041,189.203599333489,164.10249932453,0,0,0,0,0,0,0,0,0,0.335565212115473,2.17608642603403,1.34437519656986,0.257259436035947,0.573066879877513,0,0,0,0,0,0,0.449949858640699,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0.151452386666368,0.0755715601067855,2.02905142091174,0,0,0,0,0,4.49422144421606,0,0.259786004602869,0,0.14084341977668,0,0,0,16.4533191168523,15.454951793981,18.1988800205322,6.96521666286266,0.776813650941515,0,0,0,0,0.60289056221049,0.352766121407114,0.125666591329675,8.40462890296871,0.289198713839823,22.1152637987469,2.10296904931632,3.3126227769059,6.30337829075789,22.3670113461747,0.292780797011547,0,31.9321319010739,0.958520996047362,1.19980546198682,0.635351135365324,0,0,0,0,0,0,0,0.203678727700633,8.45967400148633,10.3616330957807,2.52530227063769,0,0,0.180062129805349,0,0.0680364991513279,0,0.281105173679186,0.517406741478031,0,0,0,0,0,0.348252166522167,0,0.796137067273973,0,3.86021860672073,2.27330799516474,0,0.234526059981096,0,0,0.196764231747404,0.462801338662135,0,0,0.233530684734339,0.16455984991348,0,0.0810688095458557,0.438599962275997,0.219550115291051,0.134206418760372,0,0,64.4316626818406,32.2629691329524,0,0.232236671860439,5.67016829817211,17.5464666422308,24.4615848229357,32.7188076913602,36.0642086773829,25.3636390274977,33.4275827704358,37.2048602716952,38.2129610753476,44.0421510240569,34.5820879799511,32.0617449939531,0.189667900953082,0.114248512609729,0,1.01825663922657,1.55161989734101,1.68325967736765,1.70738650235495,2.21415221969403,1.56998727841375,1.23397163921801,0,0.166845105716094,0.982794975566015,1.79889689907883,2.43432145666204,4.82354319504834,6.87489799809833,6.61701116136864,2.91843408195064,2.74561413188081,0,2.60498663367952,1.87222603868736,0.252578877947112,0.179397413521912,0.964887042726734,4.61882975416512,0.189491411770485,0.162964976442026,0,2.81628297946203,2.68010011906905,6.9032655856944,4.09780660501378,2.20689201748667,2.87904096543407,0.637819074629948,1.80249646187312,2.93564469172023,3.47157740595628,0,0.54390568381871,4.42587845717133,3.31124095565679,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,1.84522110770749,0.890328018336276,0.488660878060728,7.9185659026817,3.98235415019888,0.485561272309963,2.11626489875326,5.65815239267694,3.83892460745005,5.84126781093462,7.75284879504663,1.81766864738753,2.49548164869305,1.26414703174326,3.16255825724996,2.06271086496374,0,0,0,0,0,0,0.164549020602121,0,3.05073220482823,4.44847348814022,7.27743713581374,0.32977250588296,0,0.0603129249281559,0.358117032009409,0,39.9328746182896,0.18542530201051,3.93003025835061,3.09580301944834,4.62986318424279,3.76736914009382,1.36694227721025,1.60144721244566,1.35982743995084,2.37917468950219,0.690999869022119,10.5013767981662,0,2.23651413839534,4.75223499615926,2.50905955217362,6.55087691238533,4.04593039154462,7.19085064810423,12.0407733312654,30.5891336968631,5.59205381778233,0.56369293868419,0,0.165458490457098,0.583353565032143,0,0.337912250981556,0.234714477291508,0.5208175393758,0.314578033277133,1.44950472495604,0.864090018773596,0.632022241256357,1.01362607645082,0.616265742988964,0.129920822977795,0.537080087002444,0.198681354781265,0.360586348559907,0.886137163047463,1.11063094942962,1.21930890648,1.51239277705261,1.16949456887703,1.25075394132428,1.63627663054197,0.453460767230423,0,0.897138566094757,0,3.09103350451505,3.00291960721891,11.3554007045704,1.2862102744744,11.5361583928134,0,0,0,0,0,0,0,0,0,0,0,0,0,0.729320151204882,0.838452650511929,2.02227859295016,3.11145418922261,2.47242068686673,3.53011130550997,2.77966932940177,3.04175159868288,3.58390048633545,3.46473577638565,2.81710670581425,2.5845961030026,1.90517476513229,3.1288768005111,2.70072908649187,5.76920261124629,2.35518272215036,2.74295401908332,2.8396128985494,2.38436189947321,2.47088908274958,2.63506265162926,2.28459441307527,2.92684756596436,1.8414879800649,2.30866993537965,1.12228454331548,2.37270036248348,1.87158516513571,0.818462086339379,3.25367366490529,1.92906610981141,0.999242311751784,3.27504251823572,3.43793686477277,1.3390183244819,0.882365676478062,2.31867835620421 | |||
|short_description=p2@Pxn | |||
}} |
Revision as of 06:08, 14 September 2013
Short description: | p2@Pxn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Pxn_5end |
Coexpression cluster: | MCL_coexpression_mm9:359 |
Association with transcript: | 0bp_to_ENSMUST00000137716_5end |
EntrezGene: | Pxn |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.01e-07 | 9 |
epithelial cell of alimentary canal | 2.01e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 3.87e-22 | 47 |
intestine | 2.28e-18 | 31 |
endoderm-derived structure | 1.37e-14 | 118 |
endoderm | 1.37e-14 | 118 |
presumptive endoderm | 1.37e-14 | 118 |
digestive system | 6.48e-14 | 116 |
digestive tract | 6.48e-14 | 116 |
primitive gut | 6.48e-14 | 116 |
organ component layer | 6.25e-13 | 24 |
subdivision of digestive tract | 6.54e-13 | 114 |
mucosa | 2.92e-11 | 15 |
intestinal mucosa | 4.48e-10 | 13 |
wall of intestine | 4.48e-10 | 13 |
gastrointestinal system mucosa | 4.48e-10 | 13 |
epithelium of mucosa | 2.01e-07 | 9 |
gastrointestinal system epithelium | 2.01e-07 | 9 |
intestinal epithelium | 2.01e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.