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FFCP PHASE1:Mm9::chr5:24191651..24191671,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=53312|HGNC=|MCL_coexpression_id=2770|UniProt=P54729,Q3UYM1|association_with_transcript=18bp_to_ENSMUST00000068825,NM_016736,uc008wsf.1,uc008wsg.1,uc012dti.1_5end|description=CAGE_peak_2_at_Nub1_5end|id=chr5:24191651..24191671,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!1.10e-14!34;UBERON:0002791!1.64e-13!29;UBERON:0003528!1.64e-13!29;UBERON:0001893!1.64e-13!29;UBERON:0000956!2.31e-11!21;UBERON:0001869!2.31e-11!21;UBERON:0000203!2.31e-11!21;UBERON:0002780!7.20e-11!39;UBERON:0001890!7.20e-11!39;UBERON:0006240!7.20e-11!39;UBERON:0001049!1.82e-10!52;UBERON:0005068!1.82e-10!52;UBERON:0006241!1.82e-10!52;UBERON:0007135!1.82e-10!52;UBERON:0003080!4.02e-10!40;UBERON:0007811!8.80e-10!86;UBERON:0000153!1.10e-09!94;UBERON:0000955!1.45e-09!50;UBERON:0006238!1.45e-09!50;UBERON:0002616!4.48e-09!49;UBERON:0001017!7.33e-09!73;UBERON:0005743!7.33e-09!73;UBERON:0002619!8.96e-09!17;UBERON:0003056!9.10e-09!49;UBERON:0000073!2.16e-08!75;UBERON:0001016!2.16e-08!75;UBERON:0002346!1.06e-07!71;UBERON:0003075!1.06e-07!71;UBERON:0007284!1.06e-07!71;UBERON:0002021!1.53e-07!10;UBERON:0000411!1.53e-07!10;UBERON:0001950!1.53e-07!10;UBERON:0000033!1.68e-07!63|ontology_enrichment_uberon_v019_2=UBERON:0002020,5.90e-15,34;UBERON:0003528,9.04e-14,29;UBERON:0002791,9.04e-14,29;UBERON:0001893,9.04e-14,29;UBERON:0000956,1.34e-11,21;UBERON:0001869,1.34e-11,21;UBERON:0000203,1.34e-11,21;UBERON:0002780,3.22e-11,39;UBERON:0001890,3.22e-11,39;UBERON:0006240,3.22e-11,39;UBERON:0001049,1.03e-10,52;UBERON:0005068,1.03e-10,52;UBERON:0006241,1.03e-10,52;UBERON:0007135,1.03e-10,52;UBERON:0000073,1.37e-10,54;UBERON:0003080,2.21e-10,40;UBERON:0000955,2.57e-10,47;UBERON:0006238,2.57e-10,47;UBERON:0002616,8.44e-10,46;UBERON:0001017,3.10e-09,73;UBERON:0002346,3.28e-09,64;UBERON:0003075,3.28e-09,64;UBERON:0007284,3.28e-09,64;UBERON:0003056,5.50e-09,49;UBERON:0002619,5.68e-09,17;UBERON:0001016,1.15e-08,75;UBERON:0010371,5.68e-08,73;UBERON:0002021,1.28e-07,10;UBERON:0000411,1.28e-07,10;UBERON:0001950,1.28e-07,10|phase1_expression=2.40223270657191,0.348975407639361,1.81999695755814,0.60492842261366,0,1.00727563147134,0.700837921786577,2.32421982194837,3.23814060948833,3.04283884218592,2.39705155515707,1.35612670292072,2.56801094896809,2.71003247498892,0.333109761815663,1.82227740650843,0,0.788655413395594,2.19383093769182,3.39511721438424,4.42225108785563,1.58865521921416,1.04479915655574,0.159992422793407,0.22940928106717,0,1.7230479846363,1.72376986148711,0.570070258369122,0.252030129759931,1.10865255327652,0,0,0,1.44425809875637,0.166234645358492,0.204169356262369,4.18531630736908,2.3440060335714,2.61761871986899,7.64700934440319,3.41522742479223,5.82612423637384,2.01434908760924,2.33166941804883,1.83546752161682,2.34717403304412,1.30815093828268,0.219686182734472,1.74986909166855,1.81982348112971,0,1.67782606057736,3.62681071005672,2.68875039313971,1.28629718017973,2.29226751951005,1.54701627683233,5.46254444320914,1.5869729378161,3.1691570175309,0.677689064138264,4.4464739805557,1.7997994345628,0,1.4209602298922,1.19840044207362,0,24.7818173417262,36.3165974112248,29.2351696278421,2.85650984403804,4.63823935998388,21.9258530594768,19.5524760877202,23.8996884518605,2.20231761998777,1.91531007127782,1.22885226604995,3.16527090552465,4.7573574673253,7.29278718779464,2.79182999001381,1.12552522006336,3.97275444219706,2.94628585473668,2.13557521198654,7.08317894136142,0.832988126665025,1.81371744256285,2.02905142091174,0,0,0,0,0.448026887097336,1.26399978118577,3.57903677413921,2.33807404142582,0.70667914902068,1.26759077799012,0,0,0,1.73192832808971,1.52015919285059,2.02209778005913,1.1418387971906,3.6251303710604,0.890652834388949,3.12273588179045,0.913396434936424,1.38369298353635,1.05505848386836,1.99900802130698,1.50799909595611,0.741584903203122,0.86759614151947,1.76922110389975,1.61766849947409,1.54589062922275,1.45462575940567,0,1.46390398505774,2.30391377494801,0.510914110417183,3.71426885968353,3.59941638596045,3.04968544975355,0.748953197024114,17.8425235099264,34.8062555352634,12.3415267336516,13.0414883238469,2.28566849015516,11.0324058886075,1.42575109390443,1.36847667671102,1.0108910337347,1.47309299120532,1.95180664444056,2.5289231487682,1.26043490863744,1.50704817835715,2.31324097114515,1.5373646434182,2.06143794031403,1.81092359517311,1.07783996466421,0.567318240503458,1.93546236580344,3.28793598641362,1.66828349535359,2.089512999133,3.08673204611915,3.58261680273288,1.40442637462647,1.80143534980301,1.70498099637356,1.24275463521301,1.17263029990548,1.62055855314913,1.18372367792605,0.983821158737019,0.925602677324269,1.62773761325285,1.87791380979733,1.16765342367169,1.31647879930784,1.47750717671186,1.70244500046297,1.02339991197733,1.53685080703735,1.34206418760372,14.930586348053,29.1220053033375,0.330418782983798,0,0.853153002140936,1.62565670302307,1.15980715189884,0.605050573870028,1.11189021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|EntrezGene=53312
|HGNC=
|MCL_coexpression_id=2770
|UniProt=P54729,Q3UYM1
|association_with_transcript=18bp_to_ENSMUST00000068825,NM_016736,uc008wsf.1,uc008wsg.1,uc012dti.1_5end
|description=CAGE_peak_2_at_Nub1_5end
|id=chr5:24191651..24191671,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!1.10e-14!34;UBERON:0002791!1.64e-13!29;UBERON:0003528!1.64e-13!29;UBERON:0001893!1.64e-13!29;UBERON:0000956!2.31e-11!21;UBERON:0001869!2.31e-11!21;UBERON:0000203!2.31e-11!21;UBERON:0002780!7.20e-11!39;UBERON:0001890!7.20e-11!39;UBERON:0006240!7.20e-11!39;UBERON:0001049!1.82e-10!52;UBERON:0005068!1.82e-10!52;UBERON:0006241!1.82e-10!52;UBERON:0007135!1.82e-10!52;UBERON:0003080!4.02e-10!40;UBERON:0007811!8.80e-10!86;UBERON:0000153!1.10e-09!94;UBERON:0000955!1.45e-09!50;UBERON:0006238!1.45e-09!50;UBERON:0002616!4.48e-09!49;UBERON:0001017!7.33e-09!73;UBERON:0005743!7.33e-09!73;UBERON:0002619!8.96e-09!17;UBERON:0003056!9.10e-09!49;UBERON:0000073!2.16e-08!75;UBERON:0001016!2.16e-08!75;UBERON:0002346!1.06e-07!71;UBERON:0003075!1.06e-07!71;UBERON:0007284!1.06e-07!71;UBERON:0002021!1.53e-07!10;UBERON:0000411!1.53e-07!10;UBERON:0001950!1.53e-07!10;UBERON:0000033!1.68e-07!63
|ontology_enrichment_uberon_v019_2=UBERON:0002020,5.90e-15,34;UBERON:0003528,9.04e-14,29;UBERON:0002791,9.04e-14,29;UBERON:0001893,9.04e-14,29;UBERON:0000956,1.34e-11,21;UBERON:0001869,1.34e-11,21;UBERON:0000203,1.34e-11,21;UBERON:0002780,3.22e-11,39;UBERON:0001890,3.22e-11,39;UBERON:0006240,3.22e-11,39;UBERON:0001049,1.03e-10,52;UBERON:0005068,1.03e-10,52;UBERON:0006241,1.03e-10,52;UBERON:0007135,1.03e-10,52;UBERON:0000073,1.37e-10,54;UBERON:0003080,2.21e-10,40;UBERON:0000955,2.57e-10,47;UBERON:0006238,2.57e-10,47;UBERON:0002616,8.44e-10,46;UBERON:0001017,3.10e-09,73;UBERON:0002346,3.28e-09,64;UBERON:0003075,3.28e-09,64;UBERON:0007284,3.28e-09,64;UBERON:0003056,5.50e-09,49;UBERON:0002619,5.68e-09,17;UBERON:0001016,1.15e-08,75;UBERON:0010371,5.68e-08,73;UBERON:0002021,1.28e-07,10;UBERON:0000411,1.28e-07,10;UBERON:0001950,1.28e-07,10
|phase1_expression=2.40223270657191,0.348975407639361,1.81999695755814,0.60492842261366,0,1.00727563147134,0.700837921786577,2.32421982194837,3.23814060948833,3.04283884218592,2.39705155515707,1.35612670292072,2.56801094896809,2.71003247498892,0.333109761815663,1.82227740650843,0,0.788655413395594,2.19383093769182,3.39511721438424,4.42225108785563,1.58865521921416,1.04479915655574,0.159992422793407,0.22940928106717,0,1.7230479846363,1.72376986148711,0.570070258369122,0.252030129759931,1.10865255327652,0,0,0,1.44425809875637,0.166234645358492,0.204169356262369,4.18531630736908,2.3440060335714,2.61761871986899,7.64700934440319,3.41522742479223,5.82612423637384,2.01434908760924,2.33166941804883,1.83546752161682,2.34717403304412,1.30815093828268,0.219686182734472,1.74986909166855,1.81982348112971,0,1.67782606057736,3.62681071005672,2.68875039313971,1.28629718017973,2.29226751951005,1.54701627683233,5.46254444320914,1.5869729378161,3.1691570175309,0.677689064138264,4.4464739805557,1.7997994345628,0,1.4209602298922,1.19840044207362,0,24.7818173417262,36.3165974112248,29.2351696278421,2.85650984403804,4.63823935998388,21.9258530594768,19.5524760877202,23.8996884518605,2.20231761998777,1.91531007127782,1.22885226604995,3.16527090552465,4.7573574673253,7.29278718779464,2.79182999001381,1.12552522006336,3.97275444219706,2.94628585473668,2.13557521198654,7.08317894136142,0.832988126665025,1.81371744256285,2.02905142091174,0,0,0,0,0.448026887097336,1.26399978118577,3.57903677413921,2.33807404142582,0.70667914902068,1.26759077799012,0,0,0,1.73192832808971,1.52015919285059,2.02209778005913,1.1418387971906,3.6251303710604,0.890652834388949,3.12273588179045,0.913396434936424,1.38369298353635,1.05505848386836,1.99900802130698,1.50799909595611,0.741584903203122,0.86759614151947,1.76922110389975,1.61766849947409,1.54589062922275,1.45462575940567,0,1.46390398505774,2.30391377494801,0.510914110417183,3.71426885968353,3.59941638596045,3.04968544975355,0.748953197024114,17.8425235099264,34.8062555352634,12.3415267336516,13.0414883238469,2.28566849015516,11.0324058886075,1.42575109390443,1.36847667671102,1.0108910337347,1.47309299120532,1.95180664444056,2.5289231487682,1.26043490863744,1.50704817835715,2.31324097114515,1.5373646434182,2.06143794031403,1.81092359517311,1.07783996466421,0.567318240503458,1.93546236580344,3.28793598641362,1.66828349535359,2.089512999133,3.08673204611915,3.58261680273288,1.40442637462647,1.80143534980301,1.70498099637356,1.24275463521301,1.17263029990548,1.62055855314913,1.18372367792605,0.983821158737019,0.925602677324269,1.62773761325285,1.87791380979733,1.16765342367169,1.31647879930784,1.47750717671186,1.70244500046297,1.02339991197733,1.53685080703735,1.34206418760372,14.930586348053,29.1220053033375,0.330418782983798,0,0.853153002140936,1.62565670302307,1.15980715189884,0.605050573870028,1.11189021922435,1.52180500890047,0.949058123089023,0.823494773620054,1.25667604400135,0.795825888164603,0.779856348476481,1.79763881730844,0.864552199498777,0.398282546508734,1.89667900953082,2.05647322697512,3.38123207019241,0.814605311381257,1.35766741017338,1.75339549725796,2.08680572510049,0.590440591918409,1.41298855057237,0.616985819609003,0.889357881261447,0.500535317148282,0.786235980452812,0.899448449539415,0.405720242777006,0.482354319504834,0.763877555344259,0.863088412352432,1.29708181420028,0.549122826376163,0,0.372140947668503,1.24815069245824,0.757736633841335,1.07638448113147,0.482443521363367,1.10851914099963,1.32643988239339,2.77040459951444,3.22515662972857,2.58159273117352,2.01007508930179,2.61848004974615,1.56106918286239,2.20689201748667,1.7717175171902,3.02964060449226,2.62181303545181,1.89953480052485,1.15719246865209,10.5553898757491,11.4220193601929,2.45882136509518,0.827810238914197,2.24770825982909,2.46144541843627,3.93443868904021,0.504941854408746,1.89304931649754,3.12350995437311,0.646270193198397,1.67278158566786,2.67358408898873,1.13230612315533,3.23848561339915,2.33804686329049,1.97643888973262,13.4954952897159,0.851640511249612,2.31485284767432,3.25773918707152,2.63952196756057,0,1.21390318077491,0.604647113929502,0.754420319023592,0.590603785761546,0.614870295887855,1.29214146584111,0.727067458955011,0.356497378384721,0.948110273807448,2.10837217149998,1.03135543248187,0,1.98067203434441,1.29358683782755,1.28602221018955,1.59606210278046,3.38900753443934,2.63278432963394,1.2178597964584,2.11204537257339,0.63549621259146,0.441056796109924,1.48397627647332,2.26050197374268,1.68876189798836,2.50681922406587,0.984845398470368,0.874442509889552,1.29797711407357,0.854354403989263,2.27025554759545,2.59272338317596,1.50694765603753,1.36694227721025,2.0590035588587,3.56954702987096,3.77868921273877,6.08079884739465,0,2.53068794864908,1.62655573701479,1.18805874903981,1.46361807210128,1.09181281873089,0.944050424693745,1.23980183588004,1.30877970992015,0,0,15.2197093444731,1.79419855252775,1.98550188548517,3.88902376688095,2.0665571756437,2.53434188236167,2.93393096614385,3.3853140059427,3.35549902162275,4.34851417486811,8.92893019399383,4.10814456816632,0.810900861160657,2.2596410576262,3.37794139742267,2.50637373934474,2.38417625737518,4.80781798079875,3.98761723371358,6.25991989678515,5.56309688581499,4.53717833115782,5.36018344068638,4.71438024037614,4.9088298916259,1.36038230169127,1.55390167361845,4.30626511725483,3.69346156000973,1.35232715822533,1.50145980360946,2.93042598827624,0.428736758158132,1.00314420807073,25.9785847603851,17.9526842237799,17.1868654031819,31.4491323688948,15.7568979547248,15.107877947794,11.4753825039407,8.55610286126019,14.0474146785103,12.9440077937955,1.97195960409936,1.59609949360412,2.56100408631201,1.94485373654635,4.19226325255965,4.22840069435032,2.22246727801615,1.64828045791115,2.88827288632634,1.51618327058278,3.29523089857312,2.82939512079114,3.55837728385553,3.3293079250532,2.41228969613576,3.81034953026459,3.70829843023538,2.50781986602817,3.70877310722976,2.64958056241915,2.05721551431249,3.01708870470874,2.86123427936785,3.92435324907287,1.97629698872194,2.45382362885862,2.56099162021882,1.31534855718921,3.12349461845482,1.68342681497322,4.1522256343461,2.65962102414021,2.86461730218783,3.87342102964915,2.50778594275484,4.74640098082097,2.8071793013449,3.00819475667618,1.3390183244819,1.10295709559758,1.15933917810211
|short_description=p2@Nub1
}}

Revision as of 07:17, 14 September 2013

Short description:p2@Nub1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Nub1_5end
Coexpression cluster:MCL_coexpression_mm9:2770
Association with transcript: 18bp_to_ENSMUST00000068825, NM_016736, uc008wsf.1, uc008wsg.1, uc012dti.1_5end
EntrezGene:Nub1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Nub1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.32
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.24
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.04
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.36
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.57
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.71
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.82
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.79
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.19
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.40
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.42
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.59
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I21.72
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G84.19
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.62
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G97.65
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H23.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H45.83
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.33
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.84
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.82
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.68
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.69
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C35.46
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D524.78
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F536.32
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D929.24
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.64
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D221.93
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F219.55
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D623.90
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.92
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.17
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.76
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.29
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.79
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.97
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.08
Mouse Schwann, donor1.CNhs12507.11728-123D90.83
Mouse Schwann, donor2.CNhs12573.11746-123F91.81
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.03
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.58
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.73
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.14
accessory axillary lymph node, adult.CNhs10475.1063-29H93.63
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C53.12
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C12.00
adrenal gland, neonate N25.CNhs11223.1377-27I31.51
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.87
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F51.62
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I22.30
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.71
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.05
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D817.84
corpus striatum, neonate N00.CNhs11226.630-43F134.81
cortex, adult.CNhs10473.12-14D512.34
cortex, neonate N30.CNhs11107.1392-42F213.04
diencephalon, adult.CNhs10482.20-12F22.29
diencephalon, neonate N30.CNhs11201.1388-42B211.03
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.43
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.37
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C61.95
eyeball, embryo E14.CNhs10521.399-16E22.53
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D41.51
eyeball, neonate N00.CNhs11207.633-15C62.31
eyeball, neonate N01.CNhs11140.1532-43E71.54
eyeball, neonate N02.CNhs11205.1551-44G82.06
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E21.94
forelimb, embryo E14.CNhs10577.413-26A83.29
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B53.09
gonad, embryo E13.CNhs11044.1564-45I63.58
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.80
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.70
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I91.62
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E51.63
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E31.17
heart, neonate N03.CNhs11221.1349-25I21.32
heart, neonate N10.CNhs11118.749-24G11.48
heart, neonate N16.CNhs11209.782-15G11.70
heart, neonate N20.CNhs11127.821-26I61.02
heart, neonate N25.CNhs11196.1351-25D31.54
heart, neonate N30.CNhs11202.1390-42D21.34
hippocampus, adult.CNhs10478.13-16E814.93
hippocampus, neonate N00.CNhs11228.627-43G129.12
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F71.52
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I91.90
kidney, embryo E15.CNhs10997.434-16F82.06
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G71.75
kidney, neonate N10.CNhs11206.758-6D52.09
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F31.41
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F41.30
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H11.08
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B11.11
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F82.77
lung, embryo E15.CNhs11020.432-17C53.23
lung, embryo E16.CNhs10998.458-17B62.58
lung, embryo E17.CNhs10605.480-44A62.01
lung, embryo E18.CNhs10583.1287-20I62.62
lung, neonate N00.CNhs11224.640-42C61.56
lung, neonate N06.CNhs11212.683-20E52.21
lung, neonate N07.CNhs11111.715-19A31.77
lung, neonate N10.CNhs11219.750-23E63.03
lung, neonate N20.CNhs11109.822-18A42.62
lung, neonate N25.CNhs11119.1359-25C71.90
lung, neonate N30.CNhs11133.1394-42H21.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A110.56
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A111.42
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C22.25
medulla oblongata, neonate N30.CNhs11200.1396-42A32.46
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.93
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.12
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.34
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I913.50
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H72.31
ovary, neonate N00.CNhs11217.1299-22I43.26
oviduct, adult pregnant day01.CNhs10500.988-6G62.64
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C71.29
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B91.60
pituitary gland, embryo E16.CNhs11036.449-43F63.39
pituitary gland, embryo E17.CNhs11039.1265-44F52.63
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I72.11
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C31.48
skin, neonate N00.CNhs11124.650-25G42.26
skin, neonate N03.CNhs11215.662-22H31.69
skin, neonate N06.CNhs11097.693-20I52.51
skin, neonate N10.CNhs11108.762-6C40.98
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C12.27
spleen, embryo E18.CNhs11011.1271-21F22.59
spleen, neonate N10.CNhs11116.752-24D11.51
spleen, neonate N20.CNhs11112.824-19H11.37
spleen, neonate N25.CNhs11099.1354-25G32.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.57
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.78
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D36.08
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E32.53
stomach, embryo E15.CNhs10603.1252-16G81.63
stomach, embryo E16.CNhs11022.459-17D41.19
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A91.24
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G515.22
testis, embryo E13.CNhs11031.389-23F51.79
testis, embryo E15.CNhs11034.443-27C51.99
testis, embryo E16.CNhs11033.470-26G53.89
testis, embryo E17.CNhs11029.486-18I52.07
testis, embryo E18.CNhs11027.503-18G52.53
testis, neonate N00.CNhs11189.1300-22B72.93
testis, neonate N07.CNhs11222.726-26I43.39
testis, neonate N10.CNhs11204.763-44D93.36
testis, neonate N20.CNhs11110.839-18H34.35
testis, neonate N30.CNhs11130.1391-42E28.93
thymus, adult.CNhs10471.38-12B54.11
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I22.26
thymus, embryo E16.CNhs11002.456-26C53.38
thymus, embryo E17.CNhs10581.478-18C12.51
thymus, embryo E18.CNhs10595.1273-19G42.38
thymus, neonate N02.CNhs11181.1541-43F84.81
thymus, neonate N03.CNhs11137.2104-43C73.99
thymus, neonate N06.CNhs11197.681-26C46.26
thymus, neonate N07.CNhs11211.713-19D35.56
thymus, neonate N10.CNhs11194.748-24E44.54
thymus, neonate N20.CNhs11186.820-7A25.36
thymus, neonate N25.CNhs11125.1362-25G74.71
thymus, neonate N30.CNhs11132.1393-42G24.91
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.31
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.69
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F51.50
uterus, adult.CNhs10509.92-27E52.93
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A125.98
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A217.95
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A317.19
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D731.45
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A415.76
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A515.11
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A611.48
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.56
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A814.05
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.94
whole body, embryo E11.CNhs11014.324-5I81.97
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H22.56
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B14.19
whole body, embryo E16.CNhs10514.453-14F24.23
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.83
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.41
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.51
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.65
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.92
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.98
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.12
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.15
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.66
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.87
whole body, embryo E17.5.CNhs10513.490-9F92.51
whole body, embryo E17.CNhs10517.475-3I54.75
whole body, embryo E18.CNhs10516.493-3B32.81
whole body, neonate N00.CNhs10525.657-19C23.01
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gray matter5.90e-1534
brain grey matter9.04e-1429
regional part of telencephalon9.04e-1429
telencephalon9.04e-1429
cerebral cortex1.34e-1121
cerebral hemisphere1.34e-1121
pallium1.34e-1121
regional part of forebrain3.22e-1139
forebrain3.22e-1139
future forebrain3.22e-1139
neural tube1.03e-1052
neural rod1.03e-1052
future spinal cord1.03e-1052
neural keel1.03e-1052
regional part of nervous system1.37e-1054
anterior neural tube2.21e-1040
brain2.57e-1047
future brain2.57e-1047
regional part of brain8.44e-1046
central nervous system3.10e-0973
neurectoderm3.28e-0964
neural plate3.28e-0964
presumptive neural plate3.28e-0964
pre-chordal neural plate5.50e-0949
regional part of cerebral cortex5.68e-0917
nervous system1.15e-0875
ecto-epithelium5.68e-0873
occipital lobe1.28e-0710
visual cortex1.28e-0710
neocortex1.28e-0710







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