FFCP PHASE1:Hg19::chr9:14910246..14910280,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=158326|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=23399|TSSclassifier=S|UniProt=|association_with_transcript=-12bp_to_uc003zlm.2_5end|description=CAGE_peak_3_at_FREM1_5end|id=chr9:14910246..14910280,-|ontology_enrichment_celltype=CL:0002274!1.29e-09!5;CL:0000457!1.29e-09!5;CL:0002191!1.29e-09!5;CL:0000097!1.29e-09!5;CL:0000831!1.29e-09!5;CL:0002028!1.29e-09!5;CL:0002322!1.18e-07!5|ontology_enrichment_celltype_v019=CL:0000097;4.42e-23;5!CL:0000163;1.01e-12;9|ontology_enrichment_celltype_v019_2=CL:0000097,5.46e-23,5;CL:0002028,5.46e-23,5;CL:0000163,1.13e-12,9|ontology_enrichment_development_v019=UBERON:0006215;1.31e-15;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.74e-35!115;UBERON:0001049!4.75e-23!57;UBERON:0005068!4.75e-23!57;UBERON:0006241!4.75e-23!57;UBERON:0007135!4.75e-23!57;UBERON:0001017!7.53e-19!82;UBERON:0002346!8.52e-19!90;UBERON:0005743!1.06e-18!86;UBERON:0002616!1.24e-18!59;UBERON:0000073!8.20e-18!94;UBERON:0001016!8.20e-18!94;UBERON:0000955!1.67e-17!69;UBERON:0006238!1.67e-17!69;UBERON:0003076!3.57e-17!15;UBERON:0003057!3.57e-17!15;UBERON:0003075!3.03e-16!86;UBERON:0007284!3.03e-16!86;UBERON:0004733!3.88e-13!12;UBERON:0002028!3.88e-13!12;UBERON:0007277!3.88e-13!12;UBERON:0004732!6.35e-12!13;UBERON:0002780!6.53e-11!41;UBERON:0001890!6.53e-11!41;UBERON:0006240!6.53e-11!41;UBERON:0003080!1.59e-10!42;UBERON:0000153!3.34e-10!129;UBERON:0007811!3.34e-10!129;UBERON:0002020!6.51e-10!34;UBERON:0003528!6.51e-10!34;UBERON:0000924!1.66e-09!173;UBERON:0006601!1.66e-09!173;UBERON:0002298!2.14e-09!8;UBERON:0002791!4.07e-09!33;UBERON:0002619!5.48e-09!22;UBERON:0001893!9.86e-09!34;UBERON:0002680!1.18e-08!9;UBERON:0001895!1.18e-08!9;UBERON:0010092!1.18e-08!9;UBERON:0001950!1.80e-08!20;UBERON:0000033!2.14e-08!123;UBERON:0004121!5.30e-08!169;UBERON:0000956!1.40e-07!25;UBERON:0000203!1.40e-07!25;UBERON:0001869!3.63e-07!32|ontology_enrichment_uberon_v019=UBERON:0002050;3.32e-15;5!UBERON:0005423;3.32e-15;5!UBERON:0001896;1.68e-14;3!UBERON:0005290;1.68e-14;3!UBERON:0004733;7.38e-14;12!UBERON:0002028;7.38e-14;12!UBERON:0004732;9.62e-13;13!UBERON:0002346;3.84e-11;4!UBERON:0000923;3.84e-11;4!UBERON:0010316;3.84e-11;4!UBERON:0005291;3.84e-11;4!UBERON:0002037;5.16e-08;6!UBERON:0002298;1.78e-07;6!UBERON:0006947;2.90e-07;3!UBERON:0004054;2.90e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0003076,8.78e-15,15;UBERON:0003057,8.78e-15,15;UBERON:0001896,1.46e-14,3;UBERON:0005290,1.46e-14,3;UBERON:0010096,1.46e-14,3;UBERON:0004733,7.06e-14,12;UBERON:0002028,7.06e-14,12;UBERON:0007277,7.06e-14,12;UBERON:0004732,9.25e-13,13;UBERON:0002037,5.29e-08,6;UBERON:0006215,5.29e-08,6;UBERON:0007023,8.20e-08,114;UBERON:0002298,1.66e-07,6;UBERON:0006947,2.52e-07,3;UBERON:0004054,2.52e-07,3|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,1.12101712596307,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44076983047484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0.265059536642971,0.813357600086629,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47798971368783,4.13827639862162,1.24396869324463,3.02651902175619,2.14612136824846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0.308097234229289,0,0.137836572484531,0.107420244868274,0.290033387828457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81974010175699,0,1.75809815126273,0,0,0,0,0,0,0,0.281338832821026,0,0,0,1.19548792950642,0,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0.241192877250816,13.7323562685375,14.0435660112655,3.54657142744257,0,0,0,1.07730361905316,0,0,0,0,0,0,0,0,0,0.831058409500782,0,0,0,0,1.43042921082341,0,0,0,0,1.99052386215701,0.619202951523374,0.611030144933625,0,0,0,1.14581926067151,0.802577647298789,0.234264445725339,0,0,0,2.36750641709634,0,0.30607276163049,0.252746318513952,0,0,0,0,0,0,0.284609546029793,0,0,0,0,3.66926003308263,0,0,0,0,0.0969890164884194,0,0,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=158326 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23399 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-12bp_to_uc003zlm.2_5end | |||
|description=CAGE_peak_3_at_FREM1_5end | |||
|id=chr9:14910246..14910280,- | |||
|ontology_enrichment_celltype=CL:0002274!1.29e-09!5;CL:0000457!1.29e-09!5;CL:0002191!1.29e-09!5;CL:0000097!1.29e-09!5;CL:0000831!1.29e-09!5;CL:0002028!1.29e-09!5;CL:0002322!1.18e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000097;4.42e-23;5!CL:0000163;1.01e-12;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,5.46e-23,5;CL:0002028,5.46e-23,5;CL:0000163,1.13e-12,9 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.31e-15;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.74e-35!115;UBERON:0001049!4.75e-23!57;UBERON:0005068!4.75e-23!57;UBERON:0006241!4.75e-23!57;UBERON:0007135!4.75e-23!57;UBERON:0001017!7.53e-19!82;UBERON:0002346!8.52e-19!90;UBERON:0005743!1.06e-18!86;UBERON:0002616!1.24e-18!59;UBERON:0000073!8.20e-18!94;UBERON:0001016!8.20e-18!94;UBERON:0000955!1.67e-17!69;UBERON:0006238!1.67e-17!69;UBERON:0003076!3.57e-17!15;UBERON:0003057!3.57e-17!15;UBERON:0003075!3.03e-16!86;UBERON:0007284!3.03e-16!86;UBERON:0004733!3.88e-13!12;UBERON:0002028!3.88e-13!12;UBERON:0007277!3.88e-13!12;UBERON:0004732!6.35e-12!13;UBERON:0002780!6.53e-11!41;UBERON:0001890!6.53e-11!41;UBERON:0006240!6.53e-11!41;UBERON:0003080!1.59e-10!42;UBERON:0000153!3.34e-10!129;UBERON:0007811!3.34e-10!129;UBERON:0002020!6.51e-10!34;UBERON:0003528!6.51e-10!34;UBERON:0000924!1.66e-09!173;UBERON:0006601!1.66e-09!173;UBERON:0002298!2.14e-09!8;UBERON:0002791!4.07e-09!33;UBERON:0002619!5.48e-09!22;UBERON:0001893!9.86e-09!34;UBERON:0002680!1.18e-08!9;UBERON:0001895!1.18e-08!9;UBERON:0010092!1.18e-08!9;UBERON:0001950!1.80e-08!20;UBERON:0000033!2.14e-08!123;UBERON:0004121!5.30e-08!169;UBERON:0000956!1.40e-07!25;UBERON:0000203!1.40e-07!25;UBERON:0001869!3.63e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0002050;3.32e-15;5!UBERON:0005423;3.32e-15;5!UBERON:0001896;1.68e-14;3!UBERON:0005290;1.68e-14;3!UBERON:0004733;7.38e-14;12!UBERON:0002028;7.38e-14;12!UBERON:0004732;9.62e-13;13!UBERON:0002346;3.84e-11;4!UBERON:0000923;3.84e-11;4!UBERON:0010316;3.84e-11;4!UBERON:0005291;3.84e-11;4!UBERON:0002037;5.16e-08;6!UBERON:0002298;1.78e-07;6!UBERON:0006947;2.90e-07;3!UBERON:0004054;2.90e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003076,8.78e-15,15;UBERON:0003057,8.78e-15,15;UBERON:0001896,1.46e-14,3;UBERON:0005290,1.46e-14,3;UBERON:0010096,1.46e-14,3;UBERON:0004733,7.06e-14,12;UBERON:0002028,7.06e-14,12;UBERON:0007277,7.06e-14,12;UBERON:0004732,9.25e-13,13;UBERON:0002037,5.29e-08,6;UBERON:0006215,5.29e-08,6;UBERON:0007023,8.20e-08,114;UBERON:0002298,1.66e-07,6;UBERON:0006947,2.52e-07,3;UBERON:0004054,2.52e-07,3 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,1.12101712596307,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44076983047484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0.265059536642971,0.813357600086629,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47798971368783,4.13827639862162,1.24396869324463,3.02651902175619,2.14612136824846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0.308097234229289,0,0.137836572484531,0.107420244868274,0.290033387828457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81974010175699,0,1.75809815126273,0,0,0,0,0,0,0,0.281338832821026,0,0,0,1.19548792950642,0,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0.241192877250816,13.7323562685375,14.0435660112655,3.54657142744257,0,0,0,1.07730361905316,0,0,0,0,0,0,0,0,0,0.831058409500782,0,0,0,0,1.43042921082341,0,0,0,0,1.99052386215701,0.619202951523374,0.611030144933625,0,0,0,1.14581926067151,0.802577647298789,0.234264445725339,0,0,0,2.36750641709634,0,0.30607276163049,0.252746318513952,0,0,0,0,0,0,0.284609546029793,0,0,0,0,3.66926003308263,0,0,0,0,0.0969890164884194,0,0,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,2.23425921017803,0.458320848023367,0,0,0,0,1.00775208730089,0,2.32991899054908,0.315132729228895,0.247247575143499,0.404421263125109,0,0,0,0.953423842781029,0,0.275078873194468,0,0,0,0.303747783290123,0,0.709251365692784,6.29455057619977,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.52893040697076,0,0,0.320362237703084,2.04365596629566,0.414239055347196,0,0,0,0,3.80812462358632,4.2617281983859,7.04594826555962,4.59021682993726,0,0,0.122026264901963,0,3.44045517414043,2.21858103073705,1.73869928235874,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215649622793364,0,0.109209638192014,1.52759276958623,3.61377364172861,3.59413716351106,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0.205116364240755,0.756215088665154,0.276629009856872,0.161475645631851,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0.253663240775627,0,0,0,0,0,0,1.00885116665647,0,0,0.443511850813194,0,0,0.203909198930495,0.131545547125698,0,0,0.39246546425257,0,0,0,0,0,0.929195074296532,0,1.27865567904938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,1.1598144313382,2.91426595835484,0,0,0,0,0,0,0.308696632431779,0.655678681511872,0,0.245148321753905,0,0.588925401344836,0.297046400327086,3.3812458206672,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0.436350690340377,0,0,0,0,0.126166424835079,0.218531143927391,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,0.20686599172379,0.639701945702943,0.476128862927481,0.129177819672012,0.496597714366863,0,0,0.202117188958219,0.653150243690884,0.342233301085281,0,0,0,0,0,0,0,2.34640942403454,3.91172621385173,2.03448089157869,0,0,0 | |||
|short_description=p3@FREM1 | |||
}} |
Revision as of 08:27, 14 September 2013
Short description: | p3@FREM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_FREM1_5end |
Coexpression cluster: | NA |
Association with transcript: | -12bp_to_uc003zlm.2_5end |
EntrezGene: | FREM1 |
HGNC: | 23399 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 5.46e-23 | 5 |
basophil mast progenitor cell | 5.46e-23 | 5 |
endocrine cell | 1.13e-12 | 9 |
Ontology term | p-value | n |
---|---|---|
posterior neural tube | 8.78e-15 | 15 |
chordal neural plate | 8.78e-15 | 15 |
medulla oblongata | 1.46e-14 | 3 |
myelencephalon | 1.46e-14 | 3 |
future myelencephalon | 1.46e-14 | 3 |
segmental subdivision of hindbrain | 7.06e-14 | 12 |
hindbrain | 7.06e-14 | 12 |
presumptive hindbrain | 7.06e-14 | 12 |
segmental subdivision of nervous system | 9.25e-13 | 13 |
cerebellum | 5.29e-08 | 6 |
rhombic lip | 5.29e-08 | 6 |
adult organism | 8.20e-08 | 114 |
brainstem | 1.66e-07 | 6 |
male genital duct | 2.52e-07 | 3 |
internal male genitalia | 2.52e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.