FFCP PHASE1:Mm9::chr6:136481461..136481497,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=54343|HGNC=|UniProt=|association_with_transcript=0bp_to_uc009elw.1_5end|description=CAGE_peak_3_at_Atf7ip_5end|id=chr6:136481461..136481497,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000025!1.48e-08!114;UBERON:0004111!4.27e-08!122;UBERON:0003056!6.41e-08!49;UBERON:0000033!1.33e-07!63;UBERON:0000153!1.70e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0010314,4.20e-10,92;UBERON:0003056,3.12e-08,49;UBERON:0010371,9.29e-08,73;UBERON:0000025,2.56e-07,114;UBERON:0004111,6.03e-07,122|phase1_expression=2.40223270657191,0,0,0.30246421130683,0.500895729946347,0.33575854382378,0.700837921786577,0,0,0,0,0,0.171200729931206,0,0.333109761815663,0.202475267389826,0,0.157731082679119,0,0,1.87095238332354,5.65958421845046,15.9331871374751,1.11994695955385,0,0,0.430761996159075,0.861884930743556,0.570070258369122,0.756090389279792,1.10865255327652,1.27006134691926,0.61506478758457,0,0.288851619751275,1.49611180822643,0.204169356262369,0,0,0.523523743973798,0,0,0,1.51076181570693,1.4192770370732,0.550640256485045,0,0.218025156380447,0.219686182734472,0.388859798148567,0.419959264876088,1.43752564364972,0,0,0,0.771778308107841,1.14613375975503,0,4.65327859977075,7.40587370980846,1.90149421051854,0,0,0,0,0,0.599200221036809,0,3.52544681848824,4.18518408828241,3.15487442027073,1.99955689082663,0.883474163806454,3.79721477566358,4.2172007248024,0,1.10115880999389,1.53224805702225,2.15049146558741,3.56092976871523,5.03182039813253,4.68822033501084,1.95428099300967,0,1.5279824777681,3.83017161115768,1.99320353118744,2.23679334990361,0,0,7.8263411949453,0.860423876981386,0,0.539703191637817,0.649776417447669,0.896053774194671,0.421333260395256,1.36344258062446,0.779358013808606,0.35333957451034,4.22530259330042,6.41632387071589,5.09610479413291,0,0,0.253359865475099,0,1.02765491747154,1.8125651855302,0.742210695324124,1.73485326766136,0.913396434936424,2.07553947530453,1.65794904607885,1.41106448562846,0.502666365318702,0.247194967734374,8.6759614151947,0,1.7794353494215,0.662524555381181,0.484875253135222,1.86391761218122,7.02673912827713,8.79676168616511,0.255457055208591,0.359445373517761,0,0.254140454146129,1.9472783122627,2.74500361691176,7.66491547888473,0.869121600961382,1.53429274398198,1.24672826735736,2.59586020908412,0.712875546952214,0.622034853050465,1.51633655060205,1.68353484709179,5.59517904739626,2.75882525320168,4.14142898552303,2.86339153887859,1.7009124787832,3.33095672740609,1.59292931751539,3.62184719034622,2.58681591519411,3.78212160335639,4.22282697993477,2.19195732427575,5.00485048606076,1.74126083261083,3.2925141825271,1.79130840136644,0,0,0,1.44988040774851,2.81431271977315,3.42117916775928,4.7348947117042,4.32881309844288,5.86215028972037,5.58081467400979,5.36546802799238,3.15266424391358,3.12663714835613,4.43252153013557,5.26947262048062,2.92399974850665,3.51280184465681,2.68412837520744,2.10289948564127,5.76265829323993,0.660837565967596,0.264450566663544,3.41261200856374,1.16118335930219,1.28867461322093,1.4117846723634,2.00140239460383,0.570676878337677,0.474529061544512,1.15289268306808,1.00534083520108,1.1937388322469,1.9496408711912,0.898819408654221,1.08069024937347,0.796565093017469,2.84501851429623,3.08470984046268,4.50830942692322,1.62921062276251,1.55161989734101,0.98190147846446,1.3279672796094,0.590440591918409,0.470996183524124,0.740382983530803,2.07516838961004,0.667380422864376,0.589676985339609,0.899448449539415,1.42002084971952,1.4470629585145,1.01850340712568,1.72617682470486,0.324270453550071,0.549122826376163,1.43768206527355,2.60498663367952,1.5601883655728,2.02063102357689,1.25578189465339,0.964887042726734,2.40179147216586,2.27389694124582,1.95557971730431,1.86719594352707,2.34690248288502,2.84760637651087,1.19021820443007,1.17080188714679,3.31033802623001,2.43611158613652,2.07291199254733,2.13022309130459,1.20879487306127,1.44649058581512,0,0,0.983528546038072,0.275936746304732,1.76605648986571,0.820481806145422,4.09837363441689,0.757412781613119,0.631016438832513,0,0,0.477937595905104,0,0.566153061577665,0,0.292255857911312,0,0.321321316421807,1.27746076687442,1.78065603667255,0.81443479676788,1.64970122972535,1.32745138339963,1.69946445308487,1.51161778482376,1.69744571780308,2.06711325016541,0.307435147943927,1.29214146584111,1.45413491791002,1.42598951353889,0.632073515871632,1.05418608574999,0,2.7235168460303,4.86164953884538,3.23396709456886,4.28674070063185,4.78818630834139,3.21063871683727,4.44282355625727,1.2178597964584,0.469343416127421,0.42366414172764,0.220528398054962,4.61681508236144,3.06782410722221,2.47282992205439,3.10368094408155,3.11867709515616,1.1659233465194,0.741701208042039,0.683483523191411,0.206386867963223,0.185194527369712,0,0.410082683163076,0.457556346413045,0,0,0.552799895217695,0,2.68885594543965,3.04979200690273,2.05210147561422,1.67270636811575,1.52853794622324,1.48350781023303,1.32245529160537,1.047023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| ||
|EntrezGene=54343 | |||
|HGNC= | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc009elw.1_5end | |||
|description=CAGE_peak_3_at_Atf7ip_5end | |||
|id=chr6:136481461..136481497,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!1.48e-08!114;UBERON:0004111!4.27e-08!122;UBERON:0003056!6.41e-08!49;UBERON:0000033!1.33e-07!63;UBERON:0000153!1.70e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,4.20e-10,92;UBERON:0003056,3.12e-08,49;UBERON:0010371,9.29e-08,73;UBERON:0000025,2.56e-07,114;UBERON:0004111,6.03e-07,122 | |||
|phase1_expression=2.40223270657191,0,0,0.30246421130683,0.500895729946347,0.33575854382378,0.700837921786577,0,0,0,0,0,0.171200729931206,0,0.333109761815663,0.202475267389826,0,0.157731082679119,0,0,1.87095238332354,5.65958421845046,15.9331871374751,1.11994695955385,0,0,0.430761996159075,0.861884930743556,0.570070258369122,0.756090389279792,1.10865255327652,1.27006134691926,0.61506478758457,0,0.288851619751275,1.49611180822643,0.204169356262369,0,0,0.523523743973798,0,0,0,1.51076181570693,1.4192770370732,0.550640256485045,0,0.218025156380447,0.219686182734472,0.388859798148567,0.419959264876088,1.43752564364972,0,0,0,0.771778308107841,1.14613375975503,0,4.65327859977075,7.40587370980846,1.90149421051854,0,0,0,0,0,0.599200221036809,0,3.52544681848824,4.18518408828241,3.15487442027073,1.99955689082663,0.883474163806454,3.79721477566358,4.2172007248024,0,1.10115880999389,1.53224805702225,2.15049146558741,3.56092976871523,5.03182039813253,4.68822033501084,1.95428099300967,0,1.5279824777681,3.83017161115768,1.99320353118744,2.23679334990361,0,0,7.8263411949453,0.860423876981386,0,0.539703191637817,0.649776417447669,0.896053774194671,0.421333260395256,1.36344258062446,0.779358013808606,0.35333957451034,4.22530259330042,6.41632387071589,5.09610479413291,0,0,0.253359865475099,0,1.02765491747154,1.8125651855302,0.742210695324124,1.73485326766136,0.913396434936424,2.07553947530453,1.65794904607885,1.41106448562846,0.502666365318702,0.247194967734374,8.6759614151947,0,1.7794353494215,0.662524555381181,0.484875253135222,1.86391761218122,7.02673912827713,8.79676168616511,0.255457055208591,0.359445373517761,0,0.254140454146129,1.9472783122627,2.74500361691176,7.66491547888473,0.869121600961382,1.53429274398198,1.24672826735736,2.59586020908412,0.712875546952214,0.622034853050465,1.51633655060205,1.68353484709179,5.59517904739626,2.75882525320168,4.14142898552303,2.86339153887859,1.7009124787832,3.33095672740609,1.59292931751539,3.62184719034622,2.58681591519411,3.78212160335639,4.22282697993477,2.19195732427575,5.00485048606076,1.74126083261083,3.2925141825271,1.79130840136644,0,0,0,1.44988040774851,2.81431271977315,3.42117916775928,4.7348947117042,4.32881309844288,5.86215028972037,5.58081467400979,5.36546802799238,3.15266424391358,3.12663714835613,4.43252153013557,5.26947262048062,2.92399974850665,3.51280184465681,2.68412837520744,2.10289948564127,5.76265829323993,0.660837565967596,0.264450566663544,3.41261200856374,1.16118335930219,1.28867461322093,1.4117846723634,2.00140239460383,0.570676878337677,0.474529061544512,1.15289268306808,1.00534083520108,1.1937388322469,1.9496408711912,0.898819408654221,1.08069024937347,0.796565093017469,2.84501851429623,3.08470984046268,4.50830942692322,1.62921062276251,1.55161989734101,0.98190147846446,1.3279672796094,0.590440591918409,0.470996183524124,0.740382983530803,2.07516838961004,0.667380422864376,0.589676985339609,0.899448449539415,1.42002084971952,1.4470629585145,1.01850340712568,1.72617682470486,0.324270453550071,0.549122826376163,1.43768206527355,2.60498663367952,1.5601883655728,2.02063102357689,1.25578189465339,0.964887042726734,2.40179147216586,2.27389694124582,1.95557971730431,1.86719594352707,2.34690248288502,2.84760637651087,1.19021820443007,1.17080188714679,3.31033802623001,2.43611158613652,2.07291199254733,2.13022309130459,1.20879487306127,1.44649058581512,0,0,0.983528546038072,0.275936746304732,1.76605648986571,0.820481806145422,4.09837363441689,0.757412781613119,0.631016438832513,0,0,0.477937595905104,0,0.566153061577665,0,0.292255857911312,0,0.321321316421807,1.27746076687442,1.78065603667255,0.81443479676788,1.64970122972535,1.32745138339963,1.69946445308487,1.51161778482376,1.69744571780308,2.06711325016541,0.307435147943927,1.29214146584111,1.45413491791002,1.42598951353889,0.632073515871632,1.05418608574999,0,2.7235168460303,4.86164953884538,3.23396709456886,4.28674070063185,4.78818630834139,3.21063871683727,4.44282355625727,1.2178597964584,0.469343416127421,0.42366414172764,0.220528398054962,4.61681508236144,3.06782410722221,2.47282992205439,3.10368094408155,3.11867709515616,1.1659233465194,0.741701208042039,0.683483523191411,0.206386867963223,0.185194527369712,0,0.410082683163076,0.457556346413045,0,0,0.552799895217695,0,2.68885594543965,3.04979200690273,2.05210147561422,1.67270636811575,1.52853794622324,1.48350781023303,1.32245529160537,1.04702376793612,1.16653475962614,1.86401793926078,0,1.49516546043979,0.992750942742586,1.16670713006429,1.54991788173277,1.01373675294467,0.821500670520278,0.2604087696879,0.943734099831398,0.483168241652012,0.576060012515731,3.16011120628178,2.02725215290164,2.67048488628551,2.33857481360031,1.25318686967237,1.58945083825012,1.56254084375959,1.18151621739662,1.51449674922221,1.905170166375,1.91569751759997,1.26695244961678,0.962118416403295,1.28564592399726,1.13365191807606,0,0.179427713218951,0,1.35232715822533,0.563047426353546,1.28206136987086,0.643105137237198,0,2.25900737046827,1.84130094602871,2.86447756719698,1.718531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| |||
|short_description=p3@Atf7ip | |||
}} | |||
Revision as of 09:11, 14 September 2013
| Short description: | p3@Atf7ip |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_Atf7ip_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_uc009elw.1_5end |
| EntrezGene: | Atf7ip |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| structure with developmental contribution from neural crest | 4.20e-10 | 92 |
| pre-chordal neural plate | 3.12e-08 | 49 |
| ecto-epithelium | 9.29e-08 | 73 |
| tube | 2.56e-07 | 114 |
| anatomical conduit | 6.03e-07 | 122 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
