FFCP PHASE1:Hg19::chr9:85882100..85882106,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=257019|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24125|TSSclassifier=S|UniProt=A2A2Y4|association_with_transcript=95bp_to_ENST00000328788,NM_001244962,uc004amq.1_5end|coexpression_cluster_id=C40|description=CAGE_peak_12_at_FRMD3_5end|id=chr9:85882100..85882106,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!2.15e-19!27;UBERON:0001630!7.03e-19!2;UBERON:0005090!7.03e-19!2;UBERON:0000007!8.40e-19!2;UBERON:0002148!5.34e-18!2;UBERON:0009662!5.34e-18!2;UBERON:0000948!6.37e-17!24;UBERON:0005498!6.37e-17!24;UBERON:0004140!6.37e-17!24;UBERON:0009881!6.37e-17!24;UBERON:0004141!6.37e-17!24;UBERON:0003084!6.37e-17!24;UBERON:0007005!6.37e-17!24;UBERON:0004139!6.37e-17!24;UBERON:0004291!6.37e-17!24;UBERON:0003103!2.40e-13!69;UBERON:0004151!6.98e-13!3;UBERON:0000988!2.52e-12!3;UBERON:0006331!2.52e-12!3;UBERON:0003978!2.67e-12!3;UBERON:0009751!2.67e-12!3;UBERON:0000946!2.67e-12!3;UBERON:0002523!2.67e-12!3;UBERON:0005983!2.67e-12!3;UBERON:0002165!2.67e-12!3;UBERON:0002062!2.67e-12!3;UBERON:0007280!2.67e-12!3;UBERON:0007023!1.63e-10!115;UBERON:0002426!2.16e-10!1;UBERON:0003831!2.16e-10!1;UBERON:0003898!2.16e-10!1;UBERON:0004830!2.16e-10!1;UBERON:0001774!2.16e-10!1;UBERON:0003830!2.16e-10!1;UBERON:0005175!2.16e-10!1;UBERON:0003897!2.16e-10!1;UBERON:0001103!2.16e-10!1;UBERON:0010084!2.16e-10!1;UBERON:0002079!2.59e-10!1;UBERON:0002084!2.84e-10!1;UBERON:0002082!2.84e-10!1;UBERON:0004706!2.84e-10!1;UBERON:0005418!3.10e-10!1;UBERON:0001389!3.10e-10!1;UBERON:0000026!3.10e-10!1;UBERON:0008784!3.10e-10!1;UBERON:0006058!3.10e-10!1;UBERON:0003663!3.10e-10!1;UBERON:0001383!3.10e-10!1;UBERON:0004256!3.10e-10!1;UBERON:0002529!3.10e-10!1;UBERON:0004708!3.10e-10!1;UBERON:0002101!3.10e-10!1;UBERON:0004709!3.10e-10!1;UBERON:0003661!3.10e-10!1;UBERON:0002471!3.10e-10!1;UBERON:0004357!3.10e-10!1;UBERON:0009872!3.10e-10!1;UBERON:0004347!3.10e-10!1;UBERON:0005420!3.10e-10!1;UBERON:0005732!3.10e-10!1;UBERON:0006057!3.10e-10!1;UBERON:0000978!3.10e-10!1;UBERON:0002103!3.10e-10!1;UBERON:0001665!3.10e-10!1;UBERON:0003823!3.10e-10!1;UBERON:0000154!3.10e-10!1;UBERON:0005733!3.10e-10!1;UBERON:0005730!3.10e-10!1;UBERON:0002298!4.37e-10!8;UBERON:0002135!6.91e-10!1;UBERON:0003296!7.24e-10!4;UBERON:0010133!7.24e-10!4;UBERON:0002146!8.24e-10!1;UBERON:0005623!8.24e-10!1;UBERON:0003076!2.53e-09!15;UBERON:0003057!2.53e-09!15;UBERON:0004733!6.89e-07!12;UBERON:0002028!6.89e-07!12;UBERON:0007277!6.89e-07!12|ontology_enrichment_uberon_v019=UBERON:0000007;4.52e-50;2!UBERON:0003296;7.14e-26;4!UBERON:0010133;7.14e-26;4!UBERON:0001894;1.91e-15;7|ontology_enrichment_uberon_v019_2=UBERON:0000007,4.52e-50,2;UBERON:0003296,7.14e-26,4;UBERON:0010133,7.14e-26,4;UBERON:0001894,1.91e-15,7;UBERON:0006222,1.91e-15,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606547444719948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.38971111170799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295710299979268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21393120847326,0.455324382702595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.513314034281235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5940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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=257019 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24125 | |||
|TSSclassifier=S | |||
|UniProt=A2A2Y4 | |||
|association_with_transcript=95bp_to_ENST00000328788,NM_001244962,uc004amq.1_5end | |||
|coexpression_cluster_id=C40 | |||
|description=CAGE_peak_12_at_FRMD3_5end | |||
|id=chr9:85882100..85882106,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000007;4.52e-50;2!UBERON:0003296;7.14e-26;4!UBERON:0010133;7.14e-26;4!UBERON:0001894;1.91e-15;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,4.52e-50,2;UBERON:0003296,7.14e-26,4;UBERON:0010133,7.14e-26,4;UBERON:0001894,1.91e-15,7;UBERON:0006222,1.91e-15,7 | |||
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|short_description=p12@FRMD3 | |||
}} |
Revision as of 09:31, 14 September 2013
Short description: | p12@FRMD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_FRMD3_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | 95bp_to_ENST00000328788, NM_001244962, uc004amq.1_5end |
EntrezGene: | FRMD3 |
HGNC: | 24125 |
UniProt: | A2A2Y4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pituitary gland | 4.52e-50 | 2 |
gland of diencephalon | 7.14e-26 | 4 |
neuroendocrine gland | 7.14e-26 | 4 |
diencephalon | 1.91e-15 | 7 |
future diencephalon | 1.91e-15 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.