FFCP PHASE1:Hg19::chrX:110754888..110754909,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=401613|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_NR_033974,uc004eph.2_5end|description=CAGE_peak_1_at_DKFZp686D0853_5end|id=chrX:110754888..110754909,+|ontology_enrichment_celltype=CL:0002322!8.11e-09!5;CL:0000148!5.08e-08!10;CL:0000541!5.08e-08!10|ontology_enrichment_celltype_v019=CL:0000148;9.68e-11;10!CL:0002195;1.64e-10;2!CL:0002571;1.64e-10;2!CL:0000147;1.36e-07;14!CL:0002567;4.39e-07;3|ontology_enrichment_celltype_v019_2=CL:0000148,1.31e-10,10;CL:0000541,1.31e-10,10;CL:0002195,1.61e-10,2;CL:0002571,1.61e-10,2;CL:0000147,1.68e-07,14;CL:0002567,4.59e-07,3|ontology_enrichment_development_v019=UBERON:0005795;4.14e-11;10!UBERON:0007297;1.01e-10;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060084;5.02e-07;3!DOID:127;5.02e-07;3|ontology_enrichment_disease_v019_2=DOID:0060084,5.18e-07,3;DOID:127,5.18e-07,3|ontology_enrichment_uberon=UBERON:0005156!1.30e-12!59;UBERON:0000990!1.30e-12!59;UBERON:0003133!2.68e-10!48;UBERON:0007023!1.08e-09!115;UBERON:0003101!2.33e-09!22;UBERON:0000079!2.33e-09!22;UBERON:0003135!1.18e-07!11;UBERON:0006947!4.31e-07!3;UBERON:0004054!4.31e-07!3;UBERON:0000059!5.73e-07!11|ontology_enrichment_uberon_v019=UBERON:0004175;3.58e-16;21!UBERON:0006947;4.65e-15;3!UBERON:0004054;4.65e-15;3!UBERON:0003101;4.22e-12;22!UBERON:0000079;4.22e-12;22!UBERON:0005156;1.70e-11;59!UBERON:0000990;1.70e-11;59!UBERON:0005904;2.09e-11;4!UBERON:0003135;1.76e-10;11!UBERON:0003133;4.95e-10;44!UBERON:0003975;1.82e-08;18!UBERON:0002107;3.33e-08;19!UBERON:0006925;3.33e-08;19!UBERON:0000077;4.70e-07;27!UBERON:0000474;5.42e-07;37!UBERON:0003134;7.32e-07;33!UBERON:0002106;8.92e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0005156,3.78e-18,59;UBERON:0000990,3.78e-18,59;UBERON:0004175,1.92e-16,25;UBERON:0003133,2.30e-15,48;UBERON:0006947,4.66e-15,3;UBERON:0004054,4.66e-15,3;UBERON:0003101,3.63e-12,22;UBERON:0000079,3.63e-12,22;UBERON:0005904,2.10e-11,4;UBERON:0003135,1.75e-10,11;UBERON:0005795,3.61e-09,22;UBERON:0003975,3.90e-09,22;UBERON:0002107,3.23e-08,19;UBERON:0006925,3.23e-08,19;UBERON:0008836,3.23e-08,19;UBERON:0003134,3.42e-08,37;UBERON:0000474,3.42e-08,37;UBERON:0000995,2.97e-07,21;UBERON:0003100,3.05e-07,41;UBERON:0002530,4.02e-07,59;UBERON:0003064,5.21e-07,28;UBERON:0008835,5.27e-07,22;UBERON:0003894,5.27e-07,22;UBERON:0005256,8.51e-07,122|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24430121722827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975789649036763,0.265059536642971,1.2781333715647,0.621966330092223,1.51392510525377,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,46.8993628840774,3.9313088667105,13.5881678536723,0,0.122988438543114,0,0,0,0,0,0,0,1.44331342025273,0.115930404975077,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0159663086747,3.05590740446622,5.86087236050235,0,0.102827492703324,0,0,0,0,0,0.129271715757778,0,0,10.3715865468099,0,0,0,0,13.8688653848403,2.71310802695722,0,0,12.4387182059891,0,0.602878754119172,0,0.599837947092342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,1.83574180943194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06082023295445,0,0,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0.869932992075073,0,0,0.372158369359667,0,0,0,0,0,0,0.719489830333259,1.92175920815238,0.471249609382746,0,0,1.68503382495592,1.95053495635836,0,0,0.136499911407986,2.82810863907426,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,1.77380532035299,0,0,0,0,0,0,0,1.50630081242847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0.659215496907038,0,0,0,0,0,0,0,0,0,0,0.986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.2365045443012,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0.158936578980379,0,0.326465616318295,0.424059214301822,0,0,1.32686346755009,0.611030144933625,0,0,0,0,0,0,0,0,0,7.49710365413842,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,63.775233908341,0,0,0,0,0,0,0.90392296312213,0,0,0.0633107959558787,0,0.0801588202515337,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0.482259445395058,0.412618309791701,1.66176135211674,0,0,0,0,0.236417121897595,0.0524545881349981,0,0,0,0,0,0,3.25799761052228,0,3.5924609612035,0,0.246277562248017,0.170388021785422,0,1.46552233678082,0,0.775697738169303,0.13223260174269,0,0,0.747511887973863,0,0.414239055347196,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=401613 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_NR_033974,uc004eph.2_5end | |||
|description=CAGE_peak_1_at_DKFZp686D0853_5end | |||
|id=chrX:110754888..110754909,+ | |||
|ontology_enrichment_celltype=CL:0002322!8.11e-09!5;CL:0000148!5.08e-08!10;CL:0000541!5.08e-08!10 | |||
|ontology_enrichment_celltype_v019=CL:0000148;9.68e-11;10!CL:0002195;1.64e-10;2!CL:0002571;1.64e-10;2!CL:0000147;1.36e-07;14!CL:0002567;4.39e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.31e-10,10;CL:0000541,1.31e-10,10;CL:0002195,1.61e-10,2;CL:0002571,1.61e-10,2;CL:0000147,1.68e-07,14;CL:0002567,4.59e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005795;4.14e-11;10!UBERON:0007297;1.01e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;5.02e-07;3!DOID:127;5.02e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,5.18e-07,3;DOID:127,5.18e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0005156!1.30e-12!59;UBERON:0000990!1.30e-12!59;UBERON:0003133!2.68e-10!48;UBERON:0007023!1.08e-09!115;UBERON:0003101!2.33e-09!22;UBERON:0000079!2.33e-09!22;UBERON:0003135!1.18e-07!11;UBERON:0006947!4.31e-07!3;UBERON:0004054!4.31e-07!3;UBERON:0000059!5.73e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0004175;3.58e-16;21!UBERON:0006947;4.65e-15;3!UBERON:0004054;4.65e-15;3!UBERON:0003101;4.22e-12;22!UBERON:0000079;4.22e-12;22!UBERON:0005156;1.70e-11;59!UBERON:0000990;1.70e-11;59!UBERON:0005904;2.09e-11;4!UBERON:0003135;1.76e-10;11!UBERON:0003133;4.95e-10;44!UBERON:0003975;1.82e-08;18!UBERON:0002107;3.33e-08;19!UBERON:0006925;3.33e-08;19!UBERON:0000077;4.70e-07;27!UBERON:0000474;5.42e-07;37!UBERON:0003134;7.32e-07;33!UBERON:0002106;8.92e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005156,3.78e-18,59;UBERON:0000990,3.78e-18,59;UBERON:0004175,1.92e-16,25;UBERON:0003133,2.30e-15,48;UBERON:0006947,4.66e-15,3;UBERON:0004054,4.66e-15,3;UBERON:0003101,3.63e-12,22;UBERON:0000079,3.63e-12,22;UBERON:0005904,2.10e-11,4;UBERON:0003135,1.75e-10,11;UBERON:0005795,3.61e-09,22;UBERON:0003975,3.90e-09,22;UBERON:0002107,3.23e-08,19;UBERON:0006925,3.23e-08,19;UBERON:0008836,3.23e-08,19;UBERON:0003134,3.42e-08,37;UBERON:0000474,3.42e-08,37;UBERON:0000995,2.97e-07,21;UBERON:0003100,3.05e-07,41;UBERON:0002530,4.02e-07,59;UBERON:0003064,5.21e-07,28;UBERON:0008835,5.27e-07,22;UBERON:0003894,5.27e-07,22;UBERON:0005256,8.51e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24430121722827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975789649036763,0.265059536642971,1.2781333715647,0.621966330092223,1.51392510525377,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,46.8993628840774,3.9313088667105,13.5881678536723,0,0.122988438543114,0,0,0,0,0,0,0,1.44331342025273,0.115930404975077,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0159663086747,3.05590740446622,5.86087236050235,0,0.102827492703324,0,0,0,0,0,0.129271715757778,0,0,10.3715865468099,0,0,0,0,13.8688653848403,2.71310802695722,0,0,12.4387182059891,0,0.602878754119172,0,0.599837947092342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,1.83574180943194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06082023295445,0,0,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0.869932992075073,0,0,0.372158369359667,0,0,0,0,0,0,0.719489830333259,1.92175920815238,0.471249609382746,0,0,1.68503382495592,1.95053495635836,0,0,0.136499911407986,2.82810863907426,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,1.77380532035299,0,0,0,0,0,0,0,1.50630081242847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0.659215496907038,0,0,0,0,0,0,0,0,0,0,0.986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.2365045443012,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0.158936578980379,0,0.326465616318295,0.424059214301822,0,0,1.32686346755009,0.611030144933625,0,0,0,0,0,0,0,0,0,7.49710365413842,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,63.775233908341,0,0,0,0,0,0,0.90392296312213,0,0,0.0633107959558787,0,0.0801588202515337,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0.482259445395058,0.412618309791701,1.66176135211674,0,0,0,0,0.236417121897595,0.0524545881349981,0,0,0,0,0,0,3.25799761052228,0,3.5924609612035,0,0.246277562248017,0.170388021785422,0,1.46552233678082,0,0.775697738169303,0.13223260174269,0,0,0.747511887973863,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.221858103073705,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0.295710299979268,0.955780602982214,0,0.621051827505038,0.829412415681711,0,0,0.450772826991655,0.380805212168795,0,0,0.322231671127465,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,3.61009576076435,0,0,0,0,0,0,0,0,0,0,0,2.48105589194647,0,0,0,0,0,1.13831095675649,2.21755925406597,0,0,0,0,0,0,5.18054412813393,0,0,0.913158720509496,0.215927591218621,0,0.500335809236594,0,0,0,1.60342272946051,0,0,0,0,0,0,21.5927395597374,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.231522474323834,0,0,0.490296643507811,0,0.392616934229891,0,1.2679671827502,0,3.57138888323444,1.28915775947154,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,1.13549782351571,0.546327859818478,0,0,0.26721740526556,0,0,5.45606627171324,0.267964130156178,0,0,0,0.23806443146374,0,0,0,0,0,0.217716747896961,2.39563310759697,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,14.0577660810296,1.62758471326295,1.33151354837103,0,0 | |||
|short_description=p1@DKFZp686D0853 | |||
}} |
Revision as of 10:26, 14 September 2013
Short description: | p1@DKFZp686D0853 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_DKFZp686D0853_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NR_033974, uc004eph.2_5end |
EntrezGene: | DKFZp686D0853 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.31e-10 | 10 |
melanoblast | 1.31e-10 | 10 |
hepatic stem cell | 1.61e-10 | 2 |
hepatic mesenchymal stem cell | 1.61e-10 | 2 |
pigment cell | 1.68e-07 | 14 |
light melanocyte | 4.59e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
reproductive structure | 3.78e-18 | 59 |
reproductive system | 3.78e-18 | 59 |
internal genitalia | 1.92e-16 | 25 |
reproductive organ | 2.30e-15 | 48 |
male genital duct | 4.66e-15 | 3 |
internal male genitalia | 4.66e-15 | 3 |
male organism | 3.63e-12 | 22 |
male reproductive system | 3.63e-12 | 22 |
duct of male reproductive system | 2.10e-11 | 4 |
male reproductive organ | 1.75e-10 | 11 |
embryonic uterus | 3.61e-09 | 22 |
internal female genitalia | 3.90e-09 | 22 |
liver | 3.23e-08 | 19 |
digestive gland | 3.23e-08 | 19 |
liver bud | 3.23e-08 | 19 |
female reproductive organ | 3.42e-08 | 37 |
female reproductive system | 3.42e-08 | 37 |
uterus | 2.97e-07 | 21 |
female organism | 3.05e-07 | 41 |
gland | 4.02e-07 | 59 |
intermediate mesoderm | 5.21e-07 | 28 |
hepatic diverticulum | 5.27e-07 | 22 |
liver primordium | 5.27e-07 | 22 |
trunk mesenchyme | 8.51e-07 | 122 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 5.18e-07 | 3 |
leiomyoma | 5.18e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.