FFCP PHASE1:Hg19::chrX:153603428..153603446,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2316|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3754|TSSclassifier=W|UniProt=E9KL45,P21333,Q60FE5,Q6NXF2,Q8TES4|association_with_transcript=-422bp_to_ENST00000422373,NM_001110556,NM_001456,uc004fkk.2,uc010nuu.1_5end|coexpression_cluster_id=C108|description=CAGE_peak_104_at_FLNA_5end|id=chrX:153603428..153603446,-|ontology_enrichment_celltype=CL:0000066!4.07e-16!254;CL:0002322!1.02e-08!5|ontology_enrichment_celltype_v019=CL:0002253;9.07e-18;2!CL:0002231;2.59e-12;3!CL:0002327;1.12e-09;4!CL:0002563;1.44e-09;4|ontology_enrichment_celltype_v019_2=CL:0002253,9.07e-18,2;CL:0002231,2.07e-12,3;CL:0002327,1.12e-09,4;CL:0002563,1.44e-09,4|ontology_enrichment_development_v019=UBERON:0008425;1.84e-34;1|ontology_enrichment_disease=DOID:305!2.84e-19!106;DOID:0050687!4.65e-16!143;DOID:162!1.06e-11!235;DOID:14566!3.25e-11!239;DOID:7!1.67e-07!39;DOID:299!7.20e-07!25|ontology_enrichment_disease_v019=DOID:5093;5.98e-34;4!DOID:1612;5.98e-34;4!DOID:4362;6.55e-08;5|ontology_enrichment_disease_v019_2=DOID:5093,8.36e-34,4;DOID:1612,8.36e-34,4;DOID:4362,6.13e-08,5|ontology_enrichment_uberon=UBERON:0001737!9.25e-17!9;UBERON:0001557!3.13e-13!19;UBERON:0001007!6.00e-10!155;UBERON:0001555!6.00e-10!155;UBERON:0007026!6.00e-10!155;UBERON:0000077!6.76e-10!130;UBERON:0004119!3.26e-09!169;UBERON:0000925!3.26e-09!169;UBERON:0006595!3.26e-09!169;UBERON:0004921!3.92e-09!129;UBERON:0004185!3.92e-09!129;UBERON:0000072!1.42e-08!46;UBERON:0003064!3.07e-08!37;UBERON:0005911!5.85e-08!82;UBERON:0000063!1.73e-07!97;UBERON:0000064!1.75e-07!219;UBERON:0001041!2.25e-07!98;UBERON:0008947!4.74e-07!38;UBERON:0003258!4.74e-07!38;UBERON:0000065!5.48e-07!53;UBERON:0001851!7.32e-07!16|ontology_enrichment_uberon_v019=UBERON:0000310;2.84e-14;10!UBERON:0001443;4.52e-13;11!UBERON:0001911;1.12e-09;4!UBERON:0001052;1.44e-09;4!UBERON:0001242;1.44e-09;4!UBERON:0001262;1.44e-09;4!UBERON:0004786;1.44e-09;4!UBERON:0004808;1.44e-09;4!UBERON:0001277;1.44e-09;4!UBERON:0004907;6.55e-08;5!UBERON:0000002;8.48e-07;6!UBERON:0001560;8.48e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0000310,3.25e-14,10;UBERON:0001443,5.10e-13,11;UBERON:0001911,1.12e-09,4;UBERON:0005333,1.12e-09,4;UBERON:0008425,1.12e-09,4;UBERON:0005311,1.12e-09,4;UBERON:0001052,1.44e-09,4;UBERON:0001242,1.44e-09,4;UBERON:0001262,1.44e-09,4;UBERON:0004786,1.44e-09,4;UBERON:0004808,1.44e-09,4;UBERON:0001277,1.44e-09,4;UBERON:0001046,5.73e-08,19;UBERON:0004907,6.55e-08,5;UBERON:0000002,8.02e-07,6;UBERON:0001560,8.02e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0.125542639594803,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0.365921118388786,0,0.232387885739037,0.310983165046111,0.504641701751257,0,0,0,0,0,0,0.354920400119532,0.168584690078102,0.723033089650446,0.110293972732394,0.217879444092406,0.237270619111097,0.134831308160164,0.784885860501384,0,0,0,0,0,0,0,0,0,0.860919069801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81289174387433,0,0,0,0,0,1.35359883872224,0.15403067420883,0,0,0,0,0,0.215915916102139,0,0.541892875087706,0.501689773854853,0,0,0.223874754722178,0,0,0,0.328014645699706,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0.359473404589307,0.179021174675609,0,0,0,0,0,0,0,1.04171104434093,7.60901999966903,0,0.1137934482855,0,0.472775363535873,0.344743373241465,0,0,0,0,0,0,0,0,0.10893846351899,1.53366118706464,0.0769502585037971,0,0,0.538545866458633,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,1.41353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0.391102765469606,0.0801588202515337,0,0,0.288180834308212,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0.236349546921671,0.247247575143499,0.0674035438541849,0,0.0846733320657845,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2316 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3754 | |||
|TSSclassifier=W | |||
|UniProt=E9KL45,P21333,Q60FE5,Q6NXF2,Q8TES4 | |||
|association_with_transcript=-422bp_to_ENST00000422373,NM_001110556,NM_001456,uc004fkk.2,uc010nuu.1_5end | |||
|coexpression_cluster_id=C108 | |||
|description=CAGE_peak_104_at_FLNA_5end | |||
|id=chrX:153603428..153603446,- | |||
|ontology_enrichment_celltype=CL:0000066!4.07e-16!254;CL:0002322!1.02e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0002253;9.07e-18;2!CL:0002231;2.59e-12;3!CL:0002327;1.12e-09;4!CL:0002563;1.44e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,9.07e-18,2;CL:0002231,2.07e-12,3;CL:0002327,1.12e-09,4;CL:0002563,1.44e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;1.84e-34;1 | |||
|ontology_enrichment_disease=DOID:305!2.84e-19!106;DOID:0050687!4.65e-16!143;DOID:162!1.06e-11!235;DOID:14566!3.25e-11!239;DOID:7!1.67e-07!39;DOID:299!7.20e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:5093;5.98e-34;4!DOID:1612;5.98e-34;4!DOID:4362;6.55e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,8.36e-34,4;DOID:1612,8.36e-34,4;DOID:4362,6.13e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0001737!9.25e-17!9;UBERON:0001557!3.13e-13!19;UBERON:0001007!6.00e-10!155;UBERON:0001555!6.00e-10!155;UBERON:0007026!6.00e-10!155;UBERON:0000077!6.76e-10!130;UBERON:0004119!3.26e-09!169;UBERON:0000925!3.26e-09!169;UBERON:0006595!3.26e-09!169;UBERON:0004921!3.92e-09!129;UBERON:0004185!3.92e-09!129;UBERON:0000072!1.42e-08!46;UBERON:0003064!3.07e-08!37;UBERON:0005911!5.85e-08!82;UBERON:0000063!1.73e-07!97;UBERON:0000064!1.75e-07!219;UBERON:0001041!2.25e-07!98;UBERON:0008947!4.74e-07!38;UBERON:0003258!4.74e-07!38;UBERON:0000065!5.48e-07!53;UBERON:0001851!7.32e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0000310;2.84e-14;10!UBERON:0001443;4.52e-13;11!UBERON:0001911;1.12e-09;4!UBERON:0001052;1.44e-09;4!UBERON:0001242;1.44e-09;4!UBERON:0001262;1.44e-09;4!UBERON:0004786;1.44e-09;4!UBERON:0004808;1.44e-09;4!UBERON:0001277;1.44e-09;4!UBERON:0004907;6.55e-08;5!UBERON:0000002;8.48e-07;6!UBERON:0001560;8.48e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,3.25e-14,10;UBERON:0001443,5.10e-13,11;UBERON:0001911,1.12e-09,4;UBERON:0005333,1.12e-09,4;UBERON:0008425,1.12e-09,4;UBERON:0005311,1.12e-09,4;UBERON:0001052,1.44e-09,4;UBERON:0001242,1.44e-09,4;UBERON:0001262,1.44e-09,4;UBERON:0004786,1.44e-09,4;UBERON:0004808,1.44e-09,4;UBERON:0001277,1.44e-09,4;UBERON:0001046,5.73e-08,19;UBERON:0004907,6.55e-08,5;UBERON:0000002,8.02e-07,6;UBERON:0001560,8.02e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0.125542639594803,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0.365921118388786,0,0.232387885739037,0.310983165046111,0.504641701751257,0,0,0,0,0,0,0.354920400119532,0.168584690078102,0.723033089650446,0.110293972732394,0.217879444092406,0.237270619111097,0.134831308160164,0.784885860501384,0,0,0,0,0,0,0,0,0,0.860919069801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81289174387433,0,0,0,0,0,1.35359883872224,0.15403067420883,0,0,0,0,0,0.215915916102139,0,0.541892875087706,0.501689773854853,0,0,0.223874754722178,0,0,0,0.328014645699706,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0.359473404589307,0.179021174675609,0,0,0,0,0,0,0,1.04171104434093,7.60901999966903,0,0.1137934482855,0,0.472775363535873,0.344743373241465,0,0,0,0,0,0,0,0,0.10893846351899,1.53366118706464,0.0769502585037971,0,0,0.538545866458633,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,1.41353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0.391102765469606,0.0801588202515337,0,0,0.288180834308212,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0.236349546921671,0.247247575143499,0.0674035438541849,0,0.0846733320657845,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0.118193840883968,0.222462803784138,0.078493092850514,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.223710863595585,0.687051635306701,0,0,0,0,0,0.233939463462106,0,0,0,0,0.452888530700021,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253397002022874,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0.217716747896961,0,0.0673520530145875,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p104@FLNA | |||
}} |
Revision as of 11:22, 14 September 2013
Short description: | p104@FLNA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_104_at_FLNA_5end |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | -422bp_to_ENST00000422373, NM_001110556, NM_001456, uc004fkk.2, uc010nuu.1_5end |
EntrezGene: | FLNA |
HGNC: | 3754 |
UniProt: | E9KL45P21333Q60FE5Q6NXF2Q8TES4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 9.07e-18 | 2 |
epithelial cell of prostate | 2.07e-12 | 3 |
mammary gland epithelial cell | 1.12e-09 | 4 |
intestinal epithelial cell | 1.44e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
breast | 3.25e-14 | 10 |
chest | 5.10e-13 | 11 |
mammary gland | 1.12e-09 | 4 |
mammary bud | 1.12e-09 | 4 |
mammary ridge | 1.12e-09 | 4 |
mammary placode | 1.12e-09 | 4 |
rectum | 1.44e-09 | 4 |
intestinal mucosa | 1.44e-09 | 4 |
wall of intestine | 1.44e-09 | 4 |
gastrointestinal system mucosa | 1.44e-09 | 4 |
gastrointestinal system epithelium | 1.44e-09 | 4 |
intestinal epithelium | 1.44e-09 | 4 |
hindgut | 5.73e-08 | 19 |
lower digestive tract | 6.55e-08 | 5 |
uterine cervix | 8.02e-07 | 6 |
neck of organ | 8.02e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 8.36e-34 | 4 |
breast cancer | 8.36e-34 | 4 |
cervical cancer | 6.13e-08 | 5 |
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