FFCP PHASE1:Mm9::chr7:127767748..127767760,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=3431|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:127767748..127767760,+|id=chr7:127767748..127767760,+|ontology_enrichment_celltype=CL:0000063!3.24e-16!66;CL:0002031!1.75e-13!25;CL:0000988!6.18e-13!32;CL:0002032!6.18e-13!32;CL:0000037!6.18e-13!32;CL:0000566!6.18e-13!32;CL:0000837!6.18e-13!32;CL:0000144!7.00e-13!121;CL:0000012!7.00e-13!121;CL:0000548!3.26e-12!115;CL:0000004!3.26e-12!115;CL:0000255!3.26e-12!115;CL:0000219!1.12e-11!54;CL:0002371!1.67e-11!118;CL:0002320!5.86e-11!46;CL:0000134!5.86e-11!46;CL:0000738!5.43e-10!17;CL:0002087!5.43e-10!17;CL:0000838!3.95e-09!12;CL:0000542!3.47e-08!13;CL:0000051!3.47e-08!13;CL:0000084!3.52e-08!11;CL:0000827!3.52e-08!11;CL:0000034!3.52e-08!97;CL:0000791!7.26e-07!9;CL:0000789!7.26e-07!9;CL:0002420!7.26e-07!9;CL:0002419!7.26e-07!9;CL:0000790!7.26e-07!9|ontology_enrichment_celltype_v019_2=CL:0000068,5.17e-13,3;CL:0002202,5.17e-13,3;CL:0000069,5.17e-13,3;CL:0002632,5.17e-13,3;CL:0002368,5.17e-13,3;CL:0000307,5.17e-13,3;CL:0000377,5.17e-13,3;CL:0000349,5.07e-12,3;CL:0000351,5.07e-12,3;CL:0002476,8.91e-09,2;CL:0002076,1.25e-08,15;CL:0000738,3.01e-07,17;CL:0002087,3.01e-07,17|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!5.86e-11!46|ontology_enrichment_uberon_v019_2=UBERON:0003126,5.17e-13,3;UBERON:0001005,5.17e-13,3;UBERON:0007196,5.17e-13,3;UBERON:0001558,5.17e-13,3;UBERON:0000358,5.07e-12,3;UBERON:0000307,5.07e-12,3;UBERON:0007010,5.07e-12,3;UBERON:0001962,3.67e-09,2;UBERON:0001961,3.67e-09,2;UBERON:0001744,3.67e-09,2;UBERON:0000344,1.56e-08,15|phase1_expression=0.320297694209588,0,0,1.51232105653415,1.00179145989269,0.33575854382378,1.16806320297763,0.258246646883153,0.422366166455,0.468129052643987,0.513653904676515,1.03703806693937,0.513602189793617,0.437102012094987,0,0.404950534779652,2.79824751251259,0.630924330716475,0.959801035240171,0.84877930359606,0.17008658030214,0.0992909512008853,2.61199789138935,4.15980299262857,4.12936705920906,0,0,0.430942465371778,3.23039813075836,0,0,0.635030673459631,0,0,0.577703239502549,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.139986421625363,0,1.17447824240415,0,1.00828139742739,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0.142371680799103,0,1.28734528666413,0.982430281388212,0.579728977403356,0.860423876981386,0,0,0,0,0.140444420131752,0,1.81850203222008,3.18005617059306,0.281686839553361,0,0,0,4.11332977921307,6.58735650235256,7.58286667522175,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0,0.635351135365324,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062129805349,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,1.28673953557358,0,0,0.234526059981096,0,0.23674473558521,0.196764231747404,0,0,0,0.116765342367169,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0.474529061544512,0,0,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0.407302655690628,0,0,0,0,0.156998727841375,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0.315270288212382,0,0,0,0,0,3.01582567878545,3.26343410291226,0,0,0,0,0,0.252470927204373,0,0.390438744296638,0,0.238968797952552,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0.377210159511796,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0,0.354680467284547,0,0.164549020602121,0,0,0.42366414172764,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0.339956859987711,0.279902904647316,0.138199973804424,0,0.158167996790568,0,0,0,0.655087691238533,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0,0,0,2.21985953374065,1.79427713218951,4.02923079273788,0,0,0,0,0,0,0,0,1.20297227640581,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr7:127767748..127767760,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=3431 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:127767748..127767760,+ | |||
|id=chr7:127767748..127767760,+ | |||
|ontology_enrichment_celltype=CL:0000063!3.24e-16!66;CL:0002031!1.75e-13!25;CL:0000988!6.18e-13!32;CL:0002032!6.18e-13!32;CL:0000037!6.18e-13!32;CL:0000566!6.18e-13!32;CL:0000837!6.18e-13!32;CL:0000144!7.00e-13!121;CL:0000012!7.00e-13!121;CL:0000548!3.26e-12!115;CL:0000004!3.26e-12!115;CL:0000255!3.26e-12!115;CL:0000219!1.12e-11!54;CL:0002371!1.67e-11!118;CL:0002320!5.86e-11!46;CL:0000134!5.86e-11!46;CL:0000738!5.43e-10!17;CL:0002087!5.43e-10!17;CL:0000838!3.95e-09!12;CL:0000542!3.47e-08!13;CL:0000051!3.47e-08!13;CL:0000084!3.52e-08!11;CL:0000827!3.52e-08!11;CL:0000034!3.52e-08!97;CL:0000791!7.26e-07!9;CL:0000789!7.26e-07!9;CL:0002420!7.26e-07!9;CL:0002419!7.26e-07!9;CL:0000790!7.26e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,5.17e-13,3;CL:0002202,5.17e-13,3;CL:0000069,5.17e-13,3;CL:0002632,5.17e-13,3;CL:0002368,5.17e-13,3;CL:0000307,5.17e-13,3;CL:0000377,5.17e-13,3;CL:0000349,5.07e-12,3;CL:0000351,5.07e-12,3;CL:0002476,8.91e-09,2;CL:0002076,1.25e-08,15;CL:0000738,3.01e-07,17;CL:0002087,3.01e-07,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!5.86e-11!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,5.17e-13,3;UBERON:0001005,5.17e-13,3;UBERON:0007196,5.17e-13,3;UBERON:0001558,5.17e-13,3;UBERON:0000358,5.07e-12,3;UBERON:0000307,5.07e-12,3;UBERON:0007010,5.07e-12,3;UBERON:0001962,3.67e-09,2;UBERON:0001961,3.67e-09,2;UBERON:0001744,3.67e-09,2;UBERON:0000344,1.56e-08,15 | |||
|phase1_expression=0.320297694209588,0,0,1.51232105653415,1.00179145989269,0.33575854382378,1.16806320297763,0.258246646883153,0.422366166455,0.468129052643987,0.513653904676515,1.03703806693937,0.513602189793617,0.437102012094987,0,0.404950534779652,2.79824751251259,0.630924330716475,0.959801035240171,0.84877930359606,0.17008658030214,0.0992909512008853,2.61199789138935,4.15980299262857,4.12936705920906,0,0,0.430942465371778,3.23039813075836,0,0,0.635030673459631,0,0,0.577703239502549,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.139986421625363,0,1.17447824240415,0,1.00828139742739,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0.142371680799103,0,1.28734528666413,0.982430281388212,0.579728977403356,0.860423876981386,0,0,0,0,0.140444420131752,0,1.81850203222008,3.18005617059306,0.281686839553361,0,0,0,4.11332977921307,6.58735650235256,7.58286667522175,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0,0.635351135365324,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062129805349,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,1.28673953557358,0,0,0.234526059981096,0,0.23674473558521,0.196764231747404,0,0,0,0.116765342367169,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0.474529061544512,0,0,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0.407302655690628,0,0,0,0,0.156998727841375,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0.315270288212382,0,0,0,0,0,3.01582567878545,3.26343410291226,0,0,0,0,0,0.252470927204373,0,0.390438744296638,0,0.238968797952552,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0.377210159511796,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0,0.354680467284547,0,0.164549020602121,0,0,0.42366414172764,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0.339956859987711,0.279902904647316,0.138199973804424,0,0.158167996790568,0,0,0,0.655087691238533,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0,0,0,2.21985953374065,1.79427713218951,4.02923079273788,0,0,0,0,0,0,0,0,1.20297227640581,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:127767748..127767760,+ | |||
}} |
Revision as of 11:38, 14 September 2013
Short description: | p@chr7:127767748..127767760, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:127767748..127767760, + |
Coexpression cluster: | MCL_coexpression_mm9:3431 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 5.17e-13 | 3 |
epithelial cell of tracheobronchial tree | 5.17e-13 | 3 |
branched duct epithelial cell | 5.17e-13 | 3 |
epithelial cell of lower respiratory tract | 5.17e-13 | 3 |
respiratory epithelial cell | 5.17e-13 | 3 |
tracheal epithelial cell | 5.17e-13 | 3 |
tracheoblast | 5.17e-13 | 3 |
extraembryonic cell | 5.07e-12 | 3 |
trophoblast cell | 5.07e-12 | 3 |
bone marrow macrophage | 8.91e-09 | 2 |
endo-epithelial cell | 1.25e-08 | 15 |
leukocyte | 3.01e-07 | 17 |
nongranular leukocyte | 3.01e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
trachea | 5.17e-13 | 3 |
respiratory airway | 5.17e-13 | 3 |
tracheobronchial tree | 5.17e-13 | 3 |
lower respiratory tract | 5.17e-13 | 3 |
blastocyst | 5.07e-12 | 3 |
blastula | 5.07e-12 | 3 |
cleaving embryo | 5.07e-12 | 3 |
gut-associated lymphoid tissue | 3.67e-09 | 2 |
mucosa-associated lymphoid tissue | 3.67e-09 | 2 |
lymphoid tissue | 3.67e-09 | 2 |
mucosa | 1.56e-08 | 15 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.