FFCP PHASE1:Mm9::chr9:14419889..14419899,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=75723|HGNC=|MCL_coexpression_id=3699|UniProt=E0CYQ3|association_with_transcript=27bp_to_ENSMUST00000162901_5end|description=CAGE_peak_8_at_Amotl1_5end|id=chr9:14419889..14419899,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000349,3.26e-16,3;CL:0000351,3.26e-16,3;CL:0002494,4.11e-16,3;CL:0000737,4.11e-16,3;CL:0000746,4.11e-16,3;CL:0000513,4.11e-16,3;CL:0000222,4.65e-12,7;CL:0000680,2.61e-08,6;CL:0000187,2.61e-08,6;CL:0000056,2.61e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000358,3.26e-16,3;UBERON:0000307,3.26e-16,3;UBERON:0007010,3.26e-16,3;UBERON:0005631,8.21e-16,3;UBERON:0000478,8.21e-16,3;UBERON:0000158,8.21e-16,3;UBERON:0005795,6.33e-12,4;UBERON:0000995,6.33e-12,4;UBERON:0001987,3.10e-11,2;UBERON:0003124,3.10e-11,2;UBERON:0004340,3.10e-11,2;UBERON:0003975,1.21e-09,5;UBERON:0003100,1.91e-07,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.304130793658544,0.367093504323363,0,0,0,0.388859798148567,0.279972843250725,0,0,0,0,2.57259436035947,2.29226751951005,3.09403255366465,0,0,0,0.677689064138264,0,0,0,0,0,0.384218305321555,0,0.135005938331691,0.420649922702764,0,0,0,0,0,1.10115880999389,0.127687338085188,0.768032666281217,0.131886287730194,0.365950574409639,0,0,0,0.30559649555362,0,0.284743361598206,0.186399445825301,0.681535739998656,0.151143120213571,2.6087803983151,0.860423876981386,0,0,0.649776417447669,0,0.140444420131752,0,0.259786004602869,0,0,0,0,0,0.649473123033642,0,0,0,0,0.29688427812965,0.173485326766136,1.82679286987285,0.691846491768175,0.150722640552623,1.41106448562846,0.125666591329675,1.73036477414062,0,0,0.161766849947409,0.441683036920787,0,0,0,0,0,0,0,0,0.299581278809645,0,0,0.173824320192276,0,0,0,0.916554274652847,0.124406970610093,0.505445516867349,0.631325567659422,0.130120442962704,0,0.180062129805349,0.150704817835715,0.408218994907967,0,0.281105173679186,0,0,0.189106080167819,0.527853372491847,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0.414251545071004,0.469052119962192,0,0.710234206755631,0.196764231747404,0.308534225774757,0,0,0.817357396570186,0.493679549740441,0.656669856316381,0.56748166682099,0.438599962275997,0.439100230582101,0.805238512562231,0,0.102904612379284,0,0,0,0,0.257734922644187,0,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0.189667900953082,0,0,0.203651327845314,0.193952487167626,0.280543279561274,0.126473074248515,0,0.31399745568275,0.616985819609003,0,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0.25462585178142,0,0,0,1.43768206527355,0,0.312037673114561,0,0,0,0.184753190166605,0,0.162964976442026,0.169745085775188,0.234690248288502,0,1.19021820443007,0.390267295715598,0.788175720530955,0.221464689648775,0.478364305972461,0,0.172684981865896,0,0,0,1.47529281905711,0,0.321101179975584,0,0.163934945376675,0.252470927204373,0,0,0.430846795465598,0.477937595905104,0.222798674082394,0,0,0.292255857911312,0,0,0.425820255624806,0,0.488660878060728,0.989820737835213,0,0,0,0,0,0.614870295887855,0,0.363533729477506,0,0.316036757935816,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0.709360934569094,0.891844088010353,0.493647061806363,0,4.92810586933792,1.69465656691056,1.10264199027481,0.49465875882444,0.161464426695906,0.0603129249281559,0.119372344003136,0.164140899745061,0,0,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0.203319467126849,0.216010681643603,0,0.218362563746178,0,0.41326727862668,0,0.259229946583586,0.621339313086926,0,0.448549638131936,0.330916980914195,0.194451188344048,0,0.168956125490778,0,0.13020438484395,0.314578033277133,0,0,0,0.202725215290164,0.102710957164827,0.389762468933385,0.179026695667481,0.39736270956253,0.120195449519969,0,0,0,0.201652370273681,0,0,0.233753804363138,0.226730383615211,2.66383144048878,3.22969883794113,2.18250001273302,0,1.50145980360946,0.73260649706906,0.428736758158132,0.501572104035363,0,0,0.572895513439397,0,0,0,0,0,0,0,0.31136204275253,0.399024873401031,0,0.243106717068294,0.628839487883947,0.551530525350042,0,0.618105171716683,0.320919209591815,0.252697211763798,0.50695859978048,0,0.187283014939765,0.320125762024346,0.287177344778066,0,0.347652977834566,0.192909220463705,0,0.441596760403192,0.685738504770831,0.177475806159338,0,0.290692833264657,0.376437521661322,0.169229215783353,0,0.526139422875686,0.135804113845862,0.561142271657738,0.355905054372522,0.394017929502254,0.409231043169689,0.154936841185966,0.771626443924566,0.249810577937946,0.233931608445408,0.429742108096597,0.382576664137687,0.220591419119515,0.231867835620421|short_description=p8@Amotl1}} | ||
|EntrezGene=75723 | |||
|HGNC= | |||
|MCL_coexpression_id=3699 | |||
|UniProt=E0CYQ3 | |||
|association_with_transcript=27bp_to_ENSMUST00000162901_5end | |||
|description=CAGE_peak_8_at_Amotl1_5end | |||
|id=chr9:14419889..14419899,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.26e-16,3;CL:0000351,3.26e-16,3;CL:0002494,4.11e-16,3;CL:0000737,4.11e-16,3;CL:0000746,4.11e-16,3;CL:0000513,4.11e-16,3;CL:0000222,4.65e-12,7;CL:0000680,2.61e-08,6;CL:0000187,2.61e-08,6;CL:0000056,2.61e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000358,3.26e-16,3;UBERON:0000307,3.26e-16,3;UBERON:0007010,3.26e-16,3;UBERON:0005631,8.21e-16,3;UBERON:0000478,8.21e-16,3;UBERON:0000158,8.21e-16,3;UBERON:0005795,6.33e-12,4;UBERON:0000995,6.33e-12,4;UBERON:0001987,3.10e-11,2;UBERON:0003124,3.10e-11,2;UBERON:0004340,3.10e-11,2;UBERON:0003975,1.21e-09,5;UBERON:0003100,1.91e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.304130793658544,0.367093504323363,0,0,0,0.388859798148567,0.279972843250725,0,0,0,0,2.57259436035947,2.29226751951005,3.09403255366465,0,0,0,0.677689064138264,0,0,0,0,0,0.384218305321555,0,0.135005938331691,0.420649922702764,0,0,0,0,0,1.10115880999389,0.127687338085188,0.768032666281217,0.131886287730194,0.365950574409639,0,0,0,0.30559649555362,0,0.284743361598206,0.186399445825301,0.681535739998656,0.151143120213571,2.6087803983151,0.860423876981386,0,0,0.649776417447669,0,0.140444420131752,0,0.259786004602869,0,0,0,0,0,0.649473123033642,0,0,0,0,0.29688427812965,0.173485326766136,1.82679286987285,0.691846491768175,0.150722640552623,1.41106448562846,0.125666591329675,1.73036477414062,0,0,0.161766849947409,0.441683036920787,0,0,0,0,0,0,0,0,0.299581278809645,0,0,0.173824320192276,0,0,0,0.916554274652847,0.124406970610093,0.505445516867349,0.631325567659422,0.130120442962704,0,0.180062129805349,0.150704817835715,0.408218994907967,0,0.281105173679186,0,0,0.189106080167819,0.527853372491847,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0.414251545071004,0.469052119962192,0,0.710234206755631,0.196764231747404,0.308534225774757,0,0,0.817357396570186,0.493679549740441,0.656669856316381,0.56748166682099,0.438599962275997,0.439100230582101,0.805238512562231,0,0.102904612379284,0,0,0,0,0.257734922644187,0,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0.189667900953082,0,0,0.203651327845314,0.193952487167626,0.280543279561274,0.126473074248515,0,0.31399745568275,0.616985819609003,0,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0.25462585178142,0,0,0,1.43768206527355,0,0.312037673114561,0,0,0,0.184753190166605,0,0.162964976442026,0.169745085775188,0.234690248288502,0,1.19021820443007,0.390267295715598,0.788175720530955,0.221464689648775,0.478364305972461,0,0.172684981865896,0,0,0,1.47529281905711,0,0.321101179975584,0,0.163934945376675,0.252470927204373,0,0,0.430846795465598,0.477937595905104,0.222798674082394,0,0,0.292255857911312,0,0,0.425820255624806,0,0.488660878060728,0.989820737835213,0,0,0,0,0,0.614870295887855,0,0.363533729477506,0,0.316036757935816,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0.709360934569094,0.891844088010353,0.493647061806363,0,4.92810586933792,1.69465656691056,1.10264199027481,0.49465875882444,0.161464426695906,0.0603129249281559,0.119372344003136,0.164140899745061,0,0,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0.203319467126849,0.216010681643603,0,0.218362563746178,0,0.41326727862668,0,0.259229946583586,0.621339313086926,0,0.448549638131936,0.330916980914195,0.194451188344048,0,0.168956125490778,0,0.13020438484395,0.314578033277133,0,0,0,0.202725215290164,0.102710957164827,0.389762468933385,0.179026695667481,0.39736270956253,0.120195449519969,0,0,0,0.201652370273681,0,0,0.233753804363138,0.226730383615211,2.66383144048878,3.22969883794113,2.18250001273302,0,1.50145980360946,0.73260649706906,0.428736758158132,0.501572104035363,0,0,0.572895513439397,0,0,0,0,0,0,0,0.31136204275253,0.399024873401031,0,0.243106717068294,0.628839487883947,0.551530525350042,0,0.618105171716683,0.320919209591815,0.252697211763798,0.50695859978048,0,0.187283014939765,0.320125762024346,0.287177344778066,0,0.347652977834566,0.192909220463705,0,0.441596760403192,0.685738504770831,0.177475806159338,0,0.290692833264657,0.376437521661322,0.169229215783353,0,0.526139422875686,0.135804113845862,0.561142271657738,0.355905054372522,0.394017929502254,0.409231043169689,0.154936841185966,0.771626443924566,0.249810577937946,0.233931608445408,0.429742108096597,0.382576664137687,0.220591419119515,0.231867835620421 | |||
|short_description=p8@Amotl1 | |||
}} |
Revision as of 17:20, 14 September 2013
Short description: | p8@Amotl1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Amotl1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3699 |
Association with transcript: | 27bp_to_ENSMUST00000162901_5end |
EntrezGene: | Amotl1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.26e-16 | 3 |
trophoblast cell | 3.26e-16 | 3 |
cardiocyte | 4.11e-16 | 3 |
striated muscle cell | 4.11e-16 | 3 |
cardiac muscle cell | 4.11e-16 | 3 |
cardiac muscle myoblast | 4.11e-16 | 3 |
mesodermal cell | 4.65e-12 | 7 |
muscle precursor cell | 2.61e-08 | 6 |
muscle cell | 2.61e-08 | 6 |
myoblast | 2.61e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
blastocyst | 3.26e-16 | 3 |
blastula | 3.26e-16 | 3 |
cleaving embryo | 3.26e-16 | 3 |
extraembryonic membrane | 8.21e-16 | 3 |
extraembryonic structure | 8.21e-16 | 3 |
membranous layer | 8.21e-16 | 3 |
embryonic uterus | 6.33e-12 | 4 |
uterus | 6.33e-12 | 4 |
placenta | 3.10e-11 | 2 |
chorion | 3.10e-11 | 2 |
allantois | 3.10e-11 | 2 |
internal female genitalia | 1.21e-09 | 5 |
female organism | 1.91e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.