FFCP PHASE1:Mm9::chr9:46041253..46041286,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=277|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:46041253..46041286,-|id=chr9:46041253..46041286,-|ontology_enrichment_celltype=CL:0000181!2.42e-07!5;CL:0000417!2.42e-07!5;CL:0000668!2.42e-07!5;CL:0000412!2.42e-07!5;CL:0000182!2.42e-07!5|ontology_enrichment_celltype_v019_2=CL:0000182,7.40e-12,5;CL:0000223,1.53e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!4.08e-14!22;UBERON:0007499!4.08e-14!22;UBERON:0006925!4.08e-14!22;UBERON:0009497!4.08e-14!22;UBERON:0000015!4.08e-14!22;UBERON:0002423!4.08e-14!22;UBERON:0006235!4.08e-14!22;UBERON:0008835!4.08e-14!22;UBERON:0003894!4.08e-14!22;UBERON:0004161!4.08e-14!22;UBERON:0008836!4.08e-14!22;UBERON:0009854!2.42e-13!23;UBERON:0009856!2.42e-13!23;UBERON:0002365!5.54e-12!25;UBERON:0002330!5.54e-12!25;UBERON:0000160!2.98e-10!43;UBERON:0001007!6.96e-10!128;UBERON:0001555!6.96e-10!128;UBERON:0007026!6.96e-10!128;UBERON:0004119!1.35e-09!130;UBERON:0000925!1.35e-09!130;UBERON:0006595!1.35e-09!130;UBERON:0004921!1.57e-08!126;UBERON:0004185!1.57e-08!126;UBERON:0005409!4.89e-07!59;UBERON:0003929!7.04e-07!55|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.70e-23,31;UBERON:0001007,7.18e-16,116;UBERON:0001555,7.18e-16,116;UBERON:0007026,7.18e-16,116;UBERON:0004119,1.61e-15,118;UBERON:0000925,1.61e-15,118;UBERON:0006595,1.61e-15,118;UBERON:0004921,8.10e-15,114;UBERON:0005409,2.16e-14,47;UBERON:0002107,2.66e-13,22;UBERON:0007499,2.66e-13,22;UBERON:0006925,2.66e-13,22;UBERON:0009497,2.66e-13,22;UBERON:0000015,2.66e-13,22;UBERON:0002423,2.66e-13,22;UBERON:0006235,2.66e-13,22;UBERON:0008835,2.66e-13,22;UBERON:0003894,2.66e-13,22;UBERON:0004161,2.66e-13,22;UBERON:0008836,2.66e-13,22;UBERON:0009854,1.21e-12,23;UBERON:0009856,1.21e-12,23;UBERON:0002365,1.73e-11,25;UBERON:0002330,1.73e-11,25;UBERON:0003929,1.53e-07,55|phase1_expression=0,1.39590163055744,0.454999239389536,2.72217790176147,5.50985302940982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95995453676044,1.37645568640302,0,0.86152399231815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.0229671388697,52.3577926954968,17.2705021324101,37.6870322119648,42.5625542742469,0.842666520790511,0,0,0,0,0,0,0,0,0,0,2.8545969929765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57639877292028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64335026387038,1.05780226665418,0,0,0,0,0,1.71203063501303,3.32170343081158,2.63518327558417,4.77536896720512,3.38226002469956,4.09424582950152,8.08937467788799,3.8904848977445,1.99141273254367,0,0,0,0,0,0,0.0632365371242573,0,0,0,2.07516838961004,0,0,0,0,0,0,0.863088412352432,1.13494658742525,0.549122826376163,0,1.11642284300551,0.936113019343682,0.252578877947112,2.51156378930677,3.37710464954357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.2825609948627,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.114870937911227,0,0.115884325944855,0,0,0.147198920134397,0,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0,0,0,0.233931608445408,0.429742108096597,0,0,0.231867835620421|short_description=p@chr9:46041253..46041286,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=277 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:46041253..46041286,- | |||
|id=chr9:46041253..46041286,- | |||
|ontology_enrichment_celltype=CL:0000181!2.42e-07!5;CL:0000417!2.42e-07!5;CL:0000668!2.42e-07!5;CL:0000412!2.42e-07!5;CL:0000182!2.42e-07!5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.40e-12,5;CL:0000223,1.53e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!4.08e-14!22;UBERON:0007499!4.08e-14!22;UBERON:0006925!4.08e-14!22;UBERON:0009497!4.08e-14!22;UBERON:0000015!4.08e-14!22;UBERON:0002423!4.08e-14!22;UBERON:0006235!4.08e-14!22;UBERON:0008835!4.08e-14!22;UBERON:0003894!4.08e-14!22;UBERON:0004161!4.08e-14!22;UBERON:0008836!4.08e-14!22;UBERON:0009854!2.42e-13!23;UBERON:0009856!2.42e-13!23;UBERON:0002365!5.54e-12!25;UBERON:0002330!5.54e-12!25;UBERON:0000160!2.98e-10!43;UBERON:0001007!6.96e-10!128;UBERON:0001555!6.96e-10!128;UBERON:0007026!6.96e-10!128;UBERON:0004119!1.35e-09!130;UBERON:0000925!1.35e-09!130;UBERON:0006595!1.35e-09!130;UBERON:0004921!1.57e-08!126;UBERON:0004185!1.57e-08!126;UBERON:0005409!4.89e-07!59;UBERON:0003929!7.04e-07!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.70e-23,31;UBERON:0001007,7.18e-16,116;UBERON:0001555,7.18e-16,116;UBERON:0007026,7.18e-16,116;UBERON:0004119,1.61e-15,118;UBERON:0000925,1.61e-15,118;UBERON:0006595,1.61e-15,118;UBERON:0004921,8.10e-15,114;UBERON:0005409,2.16e-14,47;UBERON:0002107,2.66e-13,22;UBERON:0007499,2.66e-13,22;UBERON:0006925,2.66e-13,22;UBERON:0009497,2.66e-13,22;UBERON:0000015,2.66e-13,22;UBERON:0002423,2.66e-13,22;UBERON:0006235,2.66e-13,22;UBERON:0008835,2.66e-13,22;UBERON:0003894,2.66e-13,22;UBERON:0004161,2.66e-13,22;UBERON:0008836,2.66e-13,22;UBERON:0009854,1.21e-12,23;UBERON:0009856,1.21e-12,23;UBERON:0002365,1.73e-11,25;UBERON:0002330,1.73e-11,25;UBERON:0003929,1.53e-07,55 | |||
|phase1_expression=0,1.39590163055744,0.454999239389536,2.72217790176147,5.50985302940982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95995453676044,1.37645568640302,0,0.86152399231815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.0229671388697,52.3577926954968,17.2705021324101,37.6870322119648,42.5625542742469,0.842666520790511,0,0,0,0,0,0,0,0,0,0,2.8545969929765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57639877292028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64335026387038,1.05780226665418,0,0,0,0,0,1.71203063501303,3.32170343081158,2.63518327558417,4.77536896720512,3.38226002469956,4.09424582950152,8.08937467788799,3.8904848977445,1.99141273254367,0,0,0,0,0,0,0.0632365371242573,0,0,0,2.07516838961004,0,0,0,0,0,0,0.863088412352432,1.13494658742525,0.549122826376163,0,1.11642284300551,0.936113019343682,0.252578877947112,2.51156378930677,3.37710464954357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.2825609948627,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.114870937911227,0,0.115884325944855,0,0,0.147198920134397,0,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0,0,0,0.233931608445408,0.429742108096597,0,0,0.231867835620421 | |||
|short_description=p@chr9:46041253..46041286,- | |||
}} |
Revision as of 18:03, 14 September 2013
Short description: | p@chr9:46041253..46041286, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:46041253..46041286, - |
Coexpression cluster: | MCL_coexpression_mm9:277 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.40e-12 | 5 |
endodermal cell | 1.53e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.70e-23 | 31 |
digestive system | 7.18e-16 | 116 |
digestive tract | 7.18e-16 | 116 |
primitive gut | 7.18e-16 | 116 |
endoderm-derived structure | 1.61e-15 | 118 |
endoderm | 1.61e-15 | 118 |
presumptive endoderm | 1.61e-15 | 118 |
subdivision of digestive tract | 8.10e-15 | 114 |
gastrointestinal system | 2.16e-14 | 47 |
liver | 2.66e-13 | 22 |
epithelial sac | 2.66e-13 | 22 |
digestive gland | 2.66e-13 | 22 |
epithelium of foregut-midgut junction | 2.66e-13 | 22 |
anatomical boundary | 2.66e-13 | 22 |
hepatobiliary system | 2.66e-13 | 22 |
foregut-midgut junction | 2.66e-13 | 22 |
hepatic diverticulum | 2.66e-13 | 22 |
liver primordium | 2.66e-13 | 22 |
septum transversum | 2.66e-13 | 22 |
liver bud | 2.66e-13 | 22 |
digestive tract diverticulum | 1.21e-12 | 23 |
sac | 1.21e-12 | 23 |
exocrine gland | 1.73e-11 | 25 |
exocrine system | 1.73e-11 | 25 |
gut epithelium | 1.53e-07 | 55 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.