Personal tools

FFCP PHASE1:Mm9::chr9:66883792..66883812,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1485|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:66883792..66883812,+|id=chr9:66883792..66883812,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,3.75e-09,3;CL:0002202,3.75e-09,3;CL:0000069,3.75e-09,3;CL:0002632,3.75e-09,3;CL:0002368,3.75e-09,3;CL:0000307,3.75e-09,3;CL:0000377,3.75e-09,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!6.32e-10!18;UBERON:0000948!6.32e-10!18;UBERON:0005498!6.32e-10!18;UBERON:0004140!6.32e-10!18;UBERON:0009881!6.32e-10!18;UBERON:0004141!6.32e-10!18;UBERON:0003084!6.32e-10!18;UBERON:0007005!6.32e-10!18;UBERON:0004139!6.32e-10!18;UBERON:0004291!6.32e-10!18;UBERON:0004535!7.55e-09!23;UBERON:0001009!7.55e-09!23;UBERON:0004872!6.13e-08!33|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.12e-22,18;UBERON:0000948,1.12e-22,18;UBERON:0005498,1.12e-22,18;UBERON:0004140,1.12e-22,18;UBERON:0009881,1.12e-22,18;UBERON:0004141,1.12e-22,18;UBERON:0003084,1.12e-22,18;UBERON:0007005,1.12e-22,18;UBERON:0004139,1.12e-22,18;UBERON:0004291,1.12e-22,18;UBERON:0004535,4.14e-20,23;UBERON:0001009,4.14e-20,23;UBERON:0003103,1.96e-14,43;UBERON:0004872,4.65e-13,33;UBERON:0003914,1.32e-09,47;UBERON:0003126,3.75e-09,3;UBERON:0001005,3.75e-09,3;UBERON:0007196,3.75e-09,3;UBERON:0001558,3.75e-09,3|phase1_expression=0,0.348975407639361,0.454999239389536,0.30246421130683,0.500895729946347,0,0.467225281191051,0,0,0,0,0,0,0,0.333109761815663,0.404950534779652,0,0.157731082679119,0,0,0.17008658030214,0.0992909512008853,0,0,1.37645568640302,0,0,0.430942465371778,0.380046838912748,0,0,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0.377690453926732,0.405507724878058,2.38610777810186,0,0.65407546914134,0,0.58328969722285,0.279972843250725,0,0,0,0,0.514518872071894,1.14613375975503,1.03134418455488,0.404632921719196,0.528990979272033,0,0.338844532069132,0.889294796111139,0,0,0,0.299600110518405,0,0.103689612308478,0.135005938331691,0,0,0.662605622854841,0,0,0,0,0,0.46081959976873,0,0.0914876436024097,0,0,0,0.15279824777681,0,0.142371680799103,0.186399445825301,0.681535739998656,0.151143120213571,0,0,0,0,0,0,0.421333260395256,0.511290967734173,0.519572009205738,0,0,1.28326477414318,0,0,2.38140145112336,3.04031838570118,3.0331466700887,0.45673551887624,0,0.148442139064825,0.173485326766136,0.304465478312141,0.691846491768175,0.150722640552623,0.23517741427141,0.251333182659351,0,0,0,1.94120219936891,0.883366073841574,0.484875253135222,0,0,0,0.766371165625774,0.239630249011841,0,0,0,0,0,0,0,0.20778804455956,0.162241263067758,0.305518091550949,0.746441823660558,0,0,0,0,0,0,0.204109497453984,0,0.562210347358373,0.517406741478031,0,0,0,0,0.278047249225598,0,0,0.398068533636986,0,0,0,0.414251545071004,1.17263029990548,0,0.473489471170421,0.983821158737019,2.31400669331067,1.16266972375204,1.60964040839772,1.86824547787471,3.62031669809657,4.43252153013557,6.16122952548504,10.6725990820493,4.17145219052996,5.36825675041487,0,0.102904612379284,0.330418782983798,0.528901133327089,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0.190225626112559,0.474529061544512,1.64698954724011,1.50801125280162,0.795825888164603,1.16978452271472,0,1.51296634912286,0.398282546508734,0,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0.189709611372772,0.295220295959204,0.31399745568275,0.123397163921801,0,0,0.393117990226406,0.224862112384854,0.202860121388503,0,0,0,0.162135226775035,0.274561413188081,1.43768206527355,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0.234690248288502,0.502518772325447,0.238043640886014,0.780534591431195,0.315270288212382,0.44292937929755,0.797273843287435,0.81931657357869,1.03610989119537,0.289298117163023,0,0,0.491764273019036,0.275936746304732,0,0.117211686592203,0.327869890753351,8.07906967053994,0,1.17131623288992,0,0.238968797952552,0,0.566153061577665,0,1.16902343164525,0.395287777946524,0,0.141940085208269,0.534196811001766,0.325773918707152,0,0,0.242780636154981,0,0,0,0.614870295887855,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0.517434735131018,0,0,0,0,0,0.469343416127421,0.42366414172764,0,0,0.161464426695906,0.180938774784468,0.477489376012546,0.492422699235184,0.874442509889552,0,0,0.206386867963223,0.185194527369712,0.188368457004691,0.27338845544205,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0.209088296014469,0.436725127492355,1.34864346384821,2.0663363931334,0.523511883968059,0.648074866458964,0,0,0.448549638131936,0.330916980914195,0.194451188344048,0.904118764344118,0.506868376472335,0.352071715937262,0.13020438484395,0.314578033277133,0.241584120826006,1.44015003128933,0,0.405450430580328,0,0,0,0,0.120195449519969,0.147689527174577,0,0.15241361331,0,0,0,0.116876902181569,0.226730383615211,0.221985953374065,0.448569283047378,0.503653849092235,1.35232715822533,1.87682475451182,0.915758121336325,0,0,0,0,0,0.68741272937475,0,0,0,0,0,0,0.415149390336707,0,0,0.243106717068294,0.419226325255965,0.551530525350042,0,0.412070114477788,0.320919209591815,0.758091635291392,0.25347929989024,0.188626341386076,0.280924522409647,0.128050304809739,0.114870937911227,0,0.115884325944855,0,0.412085900803307,0.588795680537589,0.685738504770831,0.70990322463735,0.476872379894642,0.726732083161643,0.0941093804153306,0.423073039458382,1.09756783723664,0.263069711437843,0.271608227691724,0,0.474540072496697,0.591026894253381,0.409231043169689,0.464810523557898,0.192906610981141,0.499621155875892,0.467863216890817,0.859484216193193,0.57386499620653,0.441182838239031,0.695603506861264|short_description=p@chr9:66883792..66883812,+}}
|EntrezGene=NA
|HGNC=
|MCL_coexpression_id=1485
|UniProt=NA
|association_with_transcript=NA
|description=CAGE_peak_at_chr9:66883792..66883812,+
|id=chr9:66883792..66883812,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000068,3.75e-09,3;CL:0002202,3.75e-09,3;CL:0000069,3.75e-09,3;CL:0002632,3.75e-09,3;CL:0002368,3.75e-09,3;CL:0000307,3.75e-09,3;CL:0000377,3.75e-09,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007100!6.32e-10!18;UBERON:0000948!6.32e-10!18;UBERON:0005498!6.32e-10!18;UBERON:0004140!6.32e-10!18;UBERON:0009881!6.32e-10!18;UBERON:0004141!6.32e-10!18;UBERON:0003084!6.32e-10!18;UBERON:0007005!6.32e-10!18;UBERON:0004139!6.32e-10!18;UBERON:0004291!6.32e-10!18;UBERON:0004535!7.55e-09!23;UBERON:0001009!7.55e-09!23;UBERON:0004872!6.13e-08!33
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.12e-22,18;UBERON:0000948,1.12e-22,18;UBERON:0005498,1.12e-22,18;UBERON:0004140,1.12e-22,18;UBERON:0009881,1.12e-22,18;UBERON:0004141,1.12e-22,18;UBERON:0003084,1.12e-22,18;UBERON:0007005,1.12e-22,18;UBERON:0004139,1.12e-22,18;UBERON:0004291,1.12e-22,18;UBERON:0004535,4.14e-20,23;UBERON:0001009,4.14e-20,23;UBERON:0003103,1.96e-14,43;UBERON:0004872,4.65e-13,33;UBERON:0003914,1.32e-09,47;UBERON:0003126,3.75e-09,3;UBERON:0001005,3.75e-09,3;UBERON:0007196,3.75e-09,3;UBERON:0001558,3.75e-09,3
|phase1_expression=0,0.348975407639361,0.454999239389536,0.30246421130683,0.500895729946347,0,0.467225281191051,0,0,0,0,0,0,0,0.333109761815663,0.404950534779652,0,0.157731082679119,0,0,0.17008658030214,0.0992909512008853,0,0,1.37645568640302,0,0,0.430942465371778,0.380046838912748,0,0,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0.377690453926732,0.405507724878058,2.38610777810186,0,0.65407546914134,0,0.58328969722285,0.279972843250725,0,0,0,0,0.514518872071894,1.14613375975503,1.03134418455488,0.404632921719196,0.528990979272033,0,0.338844532069132,0.889294796111139,0,0,0,0.299600110518405,0,0.103689612308478,0.135005938331691,0,0,0.662605622854841,0,0,0,0,0,0.46081959976873,0,0.0914876436024097,0,0,0,0.15279824777681,0,0.142371680799103,0.186399445825301,0.681535739998656,0.151143120213571,0,0,0,0,0,0,0.421333260395256,0.511290967734173,0.519572009205738,0,0,1.28326477414318,0,0,2.38140145112336,3.04031838570118,3.0331466700887,0.45673551887624,0,0.148442139064825,0.173485326766136,0.304465478312141,0.691846491768175,0.150722640552623,0.23517741427141,0.251333182659351,0,0,0,1.94120219936891,0.883366073841574,0.484875253135222,0,0,0,0.766371165625774,0.239630249011841,0,0,0,0,0,0,0,0.20778804455956,0.162241263067758,0.305518091550949,0.746441823660558,0,0,0,0,0,0,0.204109497453984,0,0.562210347358373,0.517406741478031,0,0,0,0,0.278047249225598,0,0,0.398068533636986,0,0,0,0.414251545071004,1.17263029990548,0,0.473489471170421,0.983821158737019,2.31400669331067,1.16266972375204,1.60964040839772,1.86824547787471,3.62031669809657,4.43252153013557,6.16122952548504,10.6725990820493,4.17145219052996,5.36825675041487,0,0.102904612379284,0.330418782983798,0.528901133327089,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0.190225626112559,0.474529061544512,1.64698954724011,1.50801125280162,0.795825888164603,1.16978452271472,0,1.51296634912286,0.398282546508734,0,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0.189709611372772,0.295220295959204,0.31399745568275,0.123397163921801,0,0,0.393117990226406,0.224862112384854,0.202860121388503,0,0,0,0.162135226775035,0.274561413188081,1.43768206527355,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0.234690248288502,0.502518772325447,0.238043640886014,0.780534591431195,0.315270288212382,0.44292937929755,0.797273843287435,0.81931657357869,1.03610989119537,0.289298117163023,0,0,0.491764273019036,0.275936746304732,0,0.117211686592203,0.327869890753351,8.07906967053994,0,1.17131623288992,0,0.238968797952552,0,0.566153061577665,0,1.16902343164525,0.395287777946524,0,0.141940085208269,0.534196811001766,0.325773918707152,0,0,0.242780636154981,0,0,0,0.614870295887855,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0.517434735131018,0,0,0,0,0,0.469343416127421,0.42366414172764,0,0,0.161464426695906,0.180938774784468,0.477489376012546,0.492422699235184,0.874442509889552,0,0,0.206386867963223,0.185194527369712,0.188368457004691,0.27338845544205,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0.209088296014469,0.436725127492355,1.34864346384821,2.0663363931334,0.523511883968059,0.648074866458964,0,0,0.448549638131936,0.330916980914195,0.194451188344048,0.904118764344118,0.506868376472335,0.352071715937262,0.13020438484395,0.314578033277133,0.241584120826006,1.44015003128933,0,0.405450430580328,0,0,0,0,0.120195449519969,0.147689527174577,0,0.15241361331,0,0,0,0.116876902181569,0.226730383615211,0.221985953374065,0.448569283047378,0.503653849092235,1.35232715822533,1.87682475451182,0.915758121336325,0,0,0,0,0,0.68741272937475,0,0,0,0,0,0,0.415149390336707,0,0,0.243106717068294,0.419226325255965,0.551530525350042,0,0.412070114477788,0.320919209591815,0.758091635291392,0.25347929989024,0.188626341386076,0.280924522409647,0.128050304809739,0.114870937911227,0,0.115884325944855,0,0.412085900803307,0.588795680537589,0.685738504770831,0.70990322463735,0.476872379894642,0.726732083161643,0.0941093804153306,0.423073039458382,1.09756783723664,0.263069711437843,0.271608227691724,0,0.474540072496697,0.591026894253381,0.409231043169689,0.464810523557898,0.192906610981141,0.499621155875892,0.467863216890817,0.859484216193193,0.57386499620653,0.441182838239031,0.695603506861264
|short_description=p@chr9:66883792..66883812,+
}}

Revision as of 18:35, 14 September 2013

Short description:p@chr9:66883792..66883812, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr9:66883792..66883812, +
Coexpression cluster:MCL_coexpression_mm9:1485
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr9:66883792..66883812+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.38
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.39
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.68
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.38
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.04
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.94
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C62.31
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G31.61
heart, neonate N00.CNhs11213.639-21E31.87
heart, neonate N03.CNhs11221.1349-25I23.62
heart, neonate N10.CNhs11118.749-24G14.43
heart, neonate N16.CNhs11209.782-15G16.16
heart, neonate N20.CNhs11127.821-26I610.67
heart, neonate N25.CNhs11196.1351-25D34.17
heart, neonate N30.CNhs11202.1390-42D25.37
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E91.65
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.51
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C28.08
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A92.07
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.45
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F51.88
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr9:66883792..66883812,%2B&oldid=3062373"