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FFCP PHASE1:Mm9::chrX:132420525..132420558,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=70237|HGNC=|UniProt=|association_with_transcript=3bp_to_ENSMUST00000151989_5end|description=CAGE_peak_3_at_Bhlhb9_5end|id=chrX:132420525..132420558,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007811!2.29e-19!86;UBERON:0000153!6.75e-19!94;UBERON:0001049!2.41e-14!52;UBERON:0005068!2.41e-14!52;UBERON:0006241!2.41e-14!52;UBERON:0007135!2.41e-14!52;UBERON:0000033!5.67e-14!63;UBERON:0000955!8.67e-14!50;UBERON:0006238!8.67e-14!50;UBERON:0002346!1.06e-13!71;UBERON:0003075!1.06e-13!71;UBERON:0007284!1.06e-13!71;UBERON:0001017!1.19e-13!73;UBERON:0005743!1.19e-13!73;UBERON:0002616!2.43e-13!49;UBERON:0003056!5.77e-13!49;UBERON:0000073!1.33e-12!75;UBERON:0001016!1.33e-12!75;UBERON:0003080!3.29e-12!40;UBERON:0002780!9.94e-12!39;UBERON:0001890!9.94e-12!39;UBERON:0006240!9.94e-12!39;UBERON:0002020!2.62e-11!34;UBERON:0004121!1.22e-09!102;UBERON:0000924!1.22e-09!102;UBERON:0006601!1.22e-09!102;UBERON:0002791!2.19e-09!29;UBERON:0003528!2.19e-09!29;UBERON:0001893!2.19e-09!29;UBERON:0000477!4.21e-08!154;UBERON:0000025!2.34e-07!114;UBERON:0002021!2.90e-07!10;UBERON:0000411!2.90e-07!10;UBERON:0001950!2.90e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0010314,4.43e-16,92;UBERON:0002346,2.23e-15,64;UBERON:0003075,2.23e-15,64;UBERON:0007284,2.23e-15,64;UBERON:0000073,2.76e-15,54;UBERON:0001049,3.01e-14,52;UBERON:0005068,3.01e-14,52;UBERON:0006241,3.01e-14,52;UBERON:0007135,3.01e-14,52;UBERON:0001017,1.25e-13,73;UBERON:0010371,4.40e-13,73;UBERON:0003056,6.98e-13,49;UBERON:0001016,1.39e-12,75;UBERON:0000955,3.15e-12,47;UBERON:0006238,3.15e-12,47;UBERON:0003080,3.54e-12,40;UBERON:0002616,8.64e-12,46;UBERON:0002780,1.08e-11,39;UBERON:0001890,1.08e-11,39;UBERON:0006240,1.08e-11,39;UBERON:0002020,2.93e-11,34;UBERON:0004121,1.85e-10,95;UBERON:0000924,1.85e-10,95;UBERON:0006601,1.85e-10,95;UBERON:0003528,2.54e-09,29;UBERON:0002791,2.54e-09,29;UBERON:0001893,2.54e-09,29;UBERON:0002021,2.47e-07,10;UBERON:0000411,2.47e-07,10;UBERON:0001950,2.47e-07,10;UBERON:0000025,4.55e-07,114|phase1_expression=8.96833543786846,0,0,0,0,0.671517087647559,0,4.13194635013044,3.51971805379167,3.04283884218592,1.02730780935303,2.39316476986009,2.56801094896809,3.4093956943409,0.999329285446988,1.01237633694913,1.39912375625629,0.788655413395594,1.50825876966313,2.12194825899015,3.14660173558958,6.15603897445489,4.96279599363977,0.639969691173627,0.68822784320151,0,0.430761996159075,0,0.380046838912748,0,0.221730510655305,0,0,0,0,0.332469290716985,0.204169356262369,0.418531630736908,0,0,1.17646297606203,0,0,2.89562681343828,1.92616169317078,2.9367480345869,0.782391344348039,0.218025156380447,0.219686182734472,0.972149495371417,1.1198913730029,0,1.8456086666351,3.62681071005672,4.03312558970957,4.3734104126111,1.71920063963254,2.06268836910977,4.65327859977075,3.1739458756322,4.43681982454325,1.35537812827653,1.77858959222228,0,0,0,0.599200221036809,0.384218305321555,4.25127410464758,2.56511282830212,5.46844899513593,5.71301968807607,4.19650227808066,5.51208596467293,3.35459148563827,3.67687514644008,7.70811166995721,8.55505165170758,8.1411462625809,6.3305418110493,7.04454855738554,4.16730696445408,4.4669279840221,5.06486349028512,8.70950012327818,12.374400589894,12.6710795911202,6.71038004971082,0.302904773332736,1.51143120213571,0.579728977403356,0.860423876981386,0,0,0,0.448026887097336,0.983110940922263,2.55645483867087,2.07828803682295,2.82671659608272,4.22530259330042,3.84979432242953,2.54805239706646,7.11066703153331,1.08245520505607,1.01343946190039,0.505524445014783,0.91347103775248,1.55362730188303,1.7813056687779,3.12273588179045,1.82679286987285,2.53677046981664,2.11011696773672,3.52766121407114,1.88499886994513,1.48316980640624,1.3013942122792,0,3.88240439873782,1.54589062922275,0.969750506270444,0,4.39171195517321,7.95897485891129,0,4.19352935770721,0.599902730993408,3.17675567682662,8.08869452786043,11.8950156732843,22.9947464366542,12.1677024134594,13.2972037811772,6.64921742590592,10.3834408363365,6.00852246716866,1.8661045591514,3.0326731012041,0.631325567659422,4.94457683258274,4.13823787980251,4.50155324513373,5.72678307775717,6.32739442107349,5.63700369253339,5.90320864726292,3.62184719034622,2.58681591519411,3.78212160335639,3.87092473160687,5.47989331068937,3.89266148915837,2.78601733217733,3.2925141825271,4.77682240364384,0.702213187313235,2.31613116403244,1.98914449576915,7.87077935634907,5.62862543954631,6.48223421259654,4.49814997611899,6.49321964766433,6.01641740260775,4.88321283975857,9.12129564758705,9.22446204700639,8.55711219550098,5.25335885053105,2.35099547682982,2.19299981137998,1.3173006917463,2.41571553768669,12.6173969138476,15.2298826321341,0,0,7.25180051819795,6.0381534683714,3.09281907173024,2.01683524623343,1.55664630691409,0.951128130562796,0.474529061544512,1.15289268306808,0.754005626400808,2.98434708061726,0.779856348476481,0,0.648414149624083,0.995706366271836,2.65535061334314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|EntrezGene=70237
|HGNC=
|UniProt=
|association_with_transcript=3bp_to_ENSMUST00000151989_5end
|description=CAGE_peak_3_at_Bhlhb9_5end
|id=chrX:132420525..132420558,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007811!2.29e-19!86;UBERON:0000153!6.75e-19!94;UBERON:0001049!2.41e-14!52;UBERON:0005068!2.41e-14!52;UBERON:0006241!2.41e-14!52;UBERON:0007135!2.41e-14!52;UBERON:0000033!5.67e-14!63;UBERON:0000955!8.67e-14!50;UBERON:0006238!8.67e-14!50;UBERON:0002346!1.06e-13!71;UBERON:0003075!1.06e-13!71;UBERON:0007284!1.06e-13!71;UBERON:0001017!1.19e-13!73;UBERON:0005743!1.19e-13!73;UBERON:0002616!2.43e-13!49;UBERON:0003056!5.77e-13!49;UBERON:0000073!1.33e-12!75;UBERON:0001016!1.33e-12!75;UBERON:0003080!3.29e-12!40;UBERON:0002780!9.94e-12!39;UBERON:0001890!9.94e-12!39;UBERON:0006240!9.94e-12!39;UBERON:0002020!2.62e-11!34;UBERON:0004121!1.22e-09!102;UBERON:0000924!1.22e-09!102;UBERON:0006601!1.22e-09!102;UBERON:0002791!2.19e-09!29;UBERON:0003528!2.19e-09!29;UBERON:0001893!2.19e-09!29;UBERON:0000477!4.21e-08!154;UBERON:0000025!2.34e-07!114;UBERON:0002021!2.90e-07!10;UBERON:0000411!2.90e-07!10;UBERON:0001950!2.90e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0010314,4.43e-16,92;UBERON:0002346,2.23e-15,64;UBERON:0003075,2.23e-15,64;UBERON:0007284,2.23e-15,64;UBERON:0000073,2.76e-15,54;UBERON:0001049,3.01e-14,52;UBERON:0005068,3.01e-14,52;UBERON:0006241,3.01e-14,52;UBERON:0007135,3.01e-14,52;UBERON:0001017,1.25e-13,73;UBERON:0010371,4.40e-13,73;UBERON:0003056,6.98e-13,49;UBERON:0001016,1.39e-12,75;UBERON:0000955,3.15e-12,47;UBERON:0006238,3.15e-12,47;UBERON:0003080,3.54e-12,40;UBERON:0002616,8.64e-12,46;UBERON:0002780,1.08e-11,39;UBERON:0001890,1.08e-11,39;UBERON:0006240,1.08e-11,39;UBERON:0002020,2.93e-11,34;UBERON:0004121,1.85e-10,95;UBERON:0000924,1.85e-10,95;UBERON:0006601,1.85e-10,95;UBERON:0003528,2.54e-09,29;UBERON:0002791,2.54e-09,29;UBERON:0001893,2.54e-09,29;UBERON:0002021,2.47e-07,10;UBERON:0000411,2.47e-07,10;UBERON:0001950,2.47e-07,10;UBERON:0000025,4.55e-07,114
|phase1_expression=8.96833543786846,0,0,0,0,0.671517087647559,0,4.13194635013044,3.51971805379167,3.04283884218592,1.02730780935303,2.39316476986009,2.56801094896809,3.4093956943409,0.999329285446988,1.01237633694913,1.39912375625629,0.788655413395594,1.50825876966313,2.12194825899015,3.14660173558958,6.15603897445489,4.96279599363977,0.639969691173627,0.68822784320151,0,0.430761996159075,0,0.380046838912748,0,0.221730510655305,0,0,0,0,0.332469290716985,0.204169356262369,0.418531630736908,0,0,1.17646297606203,0,0,2.89562681343828,1.92616169317078,2.9367480345869,0.782391344348039,0.218025156380447,0.219686182734472,0.972149495371417,1.1198913730029,0,1.8456086666351,3.62681071005672,4.03312558970957,4.3734104126111,1.71920063963254,2.06268836910977,4.65327859977075,3.1739458756322,4.43681982454325,1.35537812827653,1.77858959222228,0,0,0,0.599200221036809,0.384218305321555,4.25127410464758,2.56511282830212,5.46844899513593,5.71301968807607,4.19650227808066,5.51208596467293,3.35459148563827,3.67687514644008,7.70811166995721,8.55505165170758,8.1411462625809,6.3305418110493,7.04454855738554,4.16730696445408,4.4669279840221,5.06486349028512,8.70950012327818,12.374400589894,12.6710795911202,6.71038004971082,0.302904773332736,1.51143120213571,0.579728977403356,0.860423876981386,0,0,0,0.448026887097336,0.983110940922263,2.55645483867087,2.07828803682295,2.82671659608272,4.22530259330042,3.84979432242953,2.54805239706646,7.11066703153331,1.08245520505607,1.01343946190039,0.505524445014783,0.91347103775248,1.55362730188303,1.7813056687779,3.12273588179045,1.82679286987285,2.53677046981664,2.11011696773672,3.52766121407114,1.88499886994513,1.48316980640624,1.3013942122792,0,3.88240439873782,1.54589062922275,0.969750506270444,0,4.39171195517321,7.95897485891129,0,4.19352935770721,0.599902730993408,3.17675567682662,8.08869452786043,11.8950156732843,22.9947464366542,12.1677024134594,13.2972037811772,6.64921742590592,10.3834408363365,6.00852246716866,1.8661045591514,3.0326731012041,0.631325567659422,4.94457683258274,4.13823787980251,4.50155324513373,5.72678307775717,6.32739442107349,5.63700369253339,5.90320864726292,3.62184719034622,2.58681591519411,3.78212160335639,3.87092473160687,5.47989331068937,3.89266148915837,2.78601733217733,3.2925141825271,4.77682240364384,0.702213187313235,2.31613116403244,1.98914449576915,7.87077935634907,5.62862543954631,6.48223421259654,4.49814997611899,6.49321964766433,6.01641740260775,4.88321283975857,9.12129564758705,9.22446204700639,8.55711219550098,5.25335885053105,2.35099547682982,2.19299981137998,1.3173006917463,2.41571553768669,12.6173969138476,15.2298826321341,0,0,7.25180051819795,6.0381534683714,3.09281907173024,2.01683524623343,1.55664630691409,0.951128130562796,0.474529061544512,1.15289268306808,0.754005626400808,2.98434708061726,0.779856348476481,0,0.648414149624083,0.995706366271836,2.65535061334314,5.59817711787671,6.76246414038483,4.07302655690629,2.32742984601151,3.99774173374816,3.92066530170395,1.91893192373483,2.82597710114475,1.97435462274881,0,2.16898637430922,1.76903095601883,0.899448449539415,0.608580364165509,1.92941727801933,1.78238096246994,1.15078454980324,9.56597837972709,4.94210543738547,5.75072826109418,8.18710084870708,10.6092808858951,3.28352541331245,1.07638448113147,0.482443521363367,0.369506380333209,4.73728529426212,3.25929952884052,2.8856664581782,3.98973422090454,1.84256883185997,2.14239276797412,1.95133647857799,1.57635144106191,1.99318220683897,2.71073106717728,0.983179888294428,0.863424909329478,0.867894351489069,0,0,0,1.37968373152366,5.29816946959713,8.67366480782304,4.42624352517024,1.00988370881749,5.04813151066011,3.12350995437311,4.73931475012158,4.30143836314594,2.22798674082394,3.11384183867716,4.04810701674894,3.50707029493574,1.97643888973262,7.39039027770156,2.83880170416537,3.38324646967785,5.70104357737516,2.63952196756057,0,5.09839335925461,2.72091201268276,1.69744571780308,1.47650946440386,1.22974059177571,2.32585463851399,1.45413491791002,1.42598951353889,0.948110273807448,0,1.03135543248187,4.42571487479924,7.0223826672211,4.13947788104814,8.78781843629528,5.14286677562593,6.59964625127661,6.08831376227848,1.522324745573,1.17335854031855,0.21183207086382,0.661585194164886,0.8244312647074,4.52100394748536,3.61877549568935,1.67121281604391,0.656563598980245,0.291480836629851,7.41701208042039,0.512612642393558,3.09580301944834,1.66675074632741,0.753473828018764,0.27338845544205,1.14389086603261,4.24946074984638,5.03825228365169,4.69879910935041,0.954670618015114,4.9032079005076,3.25311147402958,3.88819226958485,2.71814784818809,1.9652630737156,2.69728692769641,3.47144514046411,1.30877970992015,1.03691978633434,1.24267862617385,0.56369293868419,4.48549638131936,5.12921320417003,6.22243802700952,5.8121920564979,5.06868376472335,6.68936260280798,4.29674469985035,5.7672639434141,3.14059357073808,2.30424005006292,3.47612232690996,5.47358081283443,7.39518891586756,7.53540773271211,7.87717460936918,6.75516606256301,9.13485416351763,8.56599257612548,10.9043765943999,10.592746125045,10.6875756245051,6.82205165178267,7.69694733122636,9.23327527234395,0.226730383615211,0.887943813496259,1.34570784914214,1.17519231454855,0.772758376128762,1.87682475451182,1.64836461840539,0.214368379079066,1.00314420807073,10.7302850097243,9.66682996665071,15.4681788628637,15.9823459579629,6.16574267793578,11.3309084608455,9.45031500324528,13.0593148935024,10.4222754066367,8.28416498802912,5.70830411712972,5.1873233542134,5.29274177837816,3.16038732188782,4.40187641518763,4.96377472815038,4.00044110042907,3.5025959730612,2.88827288632634,5.30664144703975,5.0695859978048,3.77252682772152,5.61849044819294,4.54578582074572,4.13535376480416,5.23923060411381,4.98302601562879,5.98018583437486,6.1812885120496,3.82717192349433,2.05721551431249,6.21165321557681,4.05341522910446,4.21504608233753,4.51725025993587,4.99226186560891,3.47563148458268,3.94604567156764,3.25929873230068,2.24456908663095,4.38949567059444,4.82671963640261,2.45538625901814,3.71848418846318,3.66522560864169,1.74867404556562,3.97683734357194,4.08255002691767,2.86932498103265,1.54413993383661,3.01428186306548
|short_description=p3@Bhlhb9
}}

Revision as of 19:19, 14 September 2013

Short description:p3@Bhlhb9
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Bhlhb9_5end
Coexpression cluster:NA
Association with transcript: 3bp_to_ENSMUST00000151989_5end
EntrezGene:Bhlhb9
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Bhlhb9

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G78.97
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.04
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.39
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.57
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.41
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.79
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.51
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.12
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.15
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H26.16
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.96
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.90
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.93
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.94
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.12
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.85
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.03
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C14.37
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C34.65
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C74.44
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.25
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.57
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.20
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.51
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.35
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.56
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D78.14
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.33
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.04
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.47
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.06
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I68.71
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D612.37
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F612.67
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.71
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F91.51
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.83
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.23
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H91.55
adrenal gland, adult.CNhs10508.49-24D71.78
adrenal gland, embryo E14.CNhs11038.406-44C53.12
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I12.54
adrenal gland, embryo E18.CNhs11026.1262-18F52.11
adrenal gland, neonate N00.CNhs11191.1311-23C13.53
adrenal gland, neonate N25.CNhs11223.1377-27I31.88
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H11.30
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F53.88
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.39
cerebellum, neonate N30.CNhs11135.1395-42I27.96
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.19
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.18
corpora quadrigemina, adult.CNhs10501.16-22A48.09
corpus striatum, adult.CNhs10487.19-21D811.90
corpus striatum, neonate N00.CNhs11226.630-43F122.99
cortex, adult.CNhs10473.12-14D512.17
cortex, neonate N30.CNhs11107.1392-42F213.30
diencephalon, adult.CNhs10482.20-12F26.65
diencephalon, neonate N30.CNhs11201.1388-42B210.38
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.01
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.87
epididymis, adult.CNhs10490.58-23B23.03
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C64.94
eyeball, embryo E14.CNhs10521.399-16E24.14
eyeball, embryo E15.CNhs10593.426-16C94.50
eyeball, embryo E17.CNhs11023.1261-18D45.73
eyeball, neonate N00.CNhs11207.633-15C66.33
eyeball, neonate N01.CNhs11140.1532-43E75.64
eyeball, neonate N02.CNhs11205.1551-44G85.90
eyeball, neonate N16.CNhs11188.777-19A23.62
forelimb, embryo E11.CNhs10596.335-25E22.59
forelimb, embryo E12.CNhs10600.359-14H23.78
forelimb, embryo E13.CNhs10589.384-1E23.87
forelimb, embryo E14.CNhs10577.413-26A85.48
forelimb, embryo E15.CNhs11007.437-20E73.89
forelimb, embryo E17.CNhs10598.1517-43C42.79
forelimb, embryo E18.CNhs11008.1520-43B53.29
gonad, embryo E13.CNhs11044.1564-45I64.78
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.32
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.99
heart, embryo E11.CNhs10586.331-24E97.87
heart, embryo E12.CNhs11015.353-12F55.63
heart, embryo E13.CNhs11013.376-3I96.48
heart, embryo E14.CNhs10597.403-26D44.50
heart, embryo E15.CNhs11017.431-16C86.49
heart, embryo E16.CNhs11021.457-17C66.02
heart, embryo E17.CNhs11025.479-18E54.88
heart, embryo E18.CNhs11030.1283-20G39.12
heart, neonate N00.CNhs11213.639-21E39.22
heart, neonate N03.CNhs11221.1349-25I28.56
heart, neonate N10.CNhs11118.749-24G15.25
heart, neonate N16.CNhs11209.782-15G12.35
heart, neonate N20.CNhs11127.821-26I62.19
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D22.42
hippocampus, adult.CNhs10478.13-16E812.62
hippocampus, neonate N00.CNhs11228.627-43G115.23
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I57.25
intestine, embryo E13.CNhs11010.381-16D56.04
intestine, embryo E15.CNhs10602.976-16D83.09
intestine, embryo E16.CNhs10585.463-22H42.02
intestine, embryo E17.CNhs10582.482-18D31.56
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F22.98
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I92.66
kidney, embryo E15.CNhs10997.434-16F85.60
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I24.07
kidney, embryo E18.CNhs11001.1288-20C72.33
kidney, neonate N00.CNhs11214.646-21G74.00
kidney, neonate N10.CNhs11206.758-6D53.92
kidney, neonate N20.CNhs11113.832-19I11.92
kidney, neonate N25.CNhs11122.1353-25F32.83
kidney, neonate N30.CNhs11203.1385-42H11.97
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F82.17
liver, embryo E13.CNhs10524.378-3H61.77
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F51.93
liver, embryo E17.CNhs10510.481-18A31.78
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F49.57
liver, neonate N03.CNhs11123.1345-25G24.94
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H28.19
liver, neonate N10.CNhs11115.751-24B910.61
liver, neonate N20.CNhs11220.823-25A33.28
liver, neonate N25.CNhs11198.1368-26H11.08
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G24.74
lung, embryo E14.CNhs10604.404-26F83.26
lung, embryo E15.CNhs11020.432-17C52.89
lung, embryo E16.CNhs10998.458-17B63.99
lung, embryo E17.CNhs10605.480-44A61.84
lung, embryo E18.CNhs10583.1287-20I62.14
lung, neonate N00.CNhs11224.640-42C61.95
lung, neonate N06.CNhs11212.683-20E51.58
lung, neonate N07.CNhs11111.715-19A31.99
lung, neonate N10.CNhs11219.750-23E62.71
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H20.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C25.30
medulla oblongata, neonate N30.CNhs11200.1396-42A38.67
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C74.43
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.05
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.12
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.74
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.30
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.11
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.51
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I97.39
ovary, adult.CNhs10507.91-2I72.84
ovary, embryo E18.CNhs11040.505-44H73.38
ovary, neonate N00.CNhs11217.1299-22I45.70
oviduct, adult pregnant day01.CNhs10500.988-6G62.64
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F45.10
pancreas, embryo E15.CNhs11042.1556-45F22.72
pancreas, embryo E16.CNhs11003.460-26E51.70
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G84.43
pituitary gland, embryo E12.CNhs11018.346-16E67.02
pituitary gland, embryo E13.CNhs11009.370-44C74.14
pituitary gland, embryo E14.CNhs11037.398-44A58.79
pituitary gland, embryo E15.CNhs10592.427-16B95.14
pituitary gland, embryo E16.CNhs11036.449-43F66.60
pituitary gland, embryo E17.CNhs11039.1265-44F56.09
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I71.17
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G44.52
skin, neonate N03.CNhs11215.662-22H33.62
skin, neonate N06.CNhs11097.693-20I51.67
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C97.42
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C13.10
spleen, embryo E18.CNhs11011.1271-21F21.67
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.25
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C95.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.70
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E34.90
stomach, embryo E15.CNhs10603.1252-16G83.25
stomach, embryo E16.CNhs11022.459-17D43.89
stomach, embryo E17.CNhs11006.1035-18D52.72
stomach, embryo E18.CNhs10999.1286-20C61.97
stomach, neonate N03.CNhs11193.1340-24B82.70
stomach, neonate N07.CNhs11210.718-18A93.47
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I11.04
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F54.49
testis, embryo E15.CNhs11034.443-27C55.13
testis, embryo E16.CNhs11033.470-26G56.22
testis, embryo E17.CNhs11029.486-18I55.81
testis, embryo E18.CNhs11027.503-18G55.07
testis, neonate N00.CNhs11189.1300-22B76.69
testis, neonate N07.CNhs11222.726-26I44.30
testis, neonate N10.CNhs11204.763-44D95.77
testis, neonate N20.CNhs11110.839-18H33.14
testis, neonate N30.CNhs11130.1391-42E22.30
thymus, adult.CNhs10471.38-12B53.48
thymus, embryo E14.CNhs11041.402-44I45.47
thymus, embryo E15.CNhs11005.430-45I27.40
thymus, embryo E16.CNhs11002.456-26C57.54
thymus, embryo E17.CNhs10581.478-18C17.88
thymus, embryo E18.CNhs10595.1273-19G46.76
thymus, neonate N02.CNhs11181.1541-43F89.13
thymus, neonate N03.CNhs11137.2104-43C78.57
thymus, neonate N06.CNhs11197.681-26C410.90
thymus, neonate N07.CNhs11211.713-19D310.59
thymus, neonate N10.CNhs11194.748-24E410.69
thymus, neonate N20.CNhs11186.820-7A26.82
thymus, neonate N25.CNhs11125.1362-25G77.70
thymus, neonate N30.CNhs11132.1393-42G29.23
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.35
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.18
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F51.88
uterus, adult.CNhs10509.92-27E51.65
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A110.73
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.67
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A315.47
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D715.98
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A511.33
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A69.45
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A713.06
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A810.42
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A98.28
whole body, embryo E11.CNhs11014.324-5I85.71
whole body, embryo E12.CNhs10587.857-27C95.19
whole body, embryo E13.CNhs10512.372-23H25.29
whole body, embryo E14.5.CNhs10578.420-27D23.16
whole body, embryo E14.CNhs10519.395-14B14.40
whole body, embryo E16.CNhs10514.453-14F24.96
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.50
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.31
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.07
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.62
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.55
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.14
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.98
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.98
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.83
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.21
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.22
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.52
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.99
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.95
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.26
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.39
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.83
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.72
whole body, embryo E17.5.CNhs10513.490-9F93.67
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B33.98
whole body, neonate N00.CNhs10525.657-19C24.08
whole body, neonate N01.CNhs10576.659-23C62.87
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B43.01





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest4.43e-1692
neurectoderm2.23e-1564
neural plate2.23e-1564
presumptive neural plate2.23e-1564
regional part of nervous system2.76e-1554
neural tube3.01e-1452
neural rod3.01e-1452
future spinal cord3.01e-1452
neural keel3.01e-1452
central nervous system1.25e-1373
ecto-epithelium4.40e-1373
pre-chordal neural plate6.98e-1349
nervous system1.39e-1275
brain3.15e-1247
future brain3.15e-1247
anterior neural tube3.54e-1240
regional part of brain8.64e-1246
regional part of forebrain1.08e-1139
forebrain1.08e-1139
future forebrain1.08e-1139
gray matter2.93e-1134
ectoderm-derived structure1.85e-1095
ectoderm1.85e-1095
presumptive ectoderm1.85e-1095
brain grey matter2.54e-0929
regional part of telencephalon2.54e-0929
telencephalon2.54e-0929
occipital lobe2.47e-0710
visual cortex2.47e-0710
neocortex2.47e-0710
tube4.55e-07114







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