FFCP PHASE1:Hg19::chr1:43162358..43162369,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4904 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=8014 | |||
|TSSclassifier=strong | |||
|UniProt=A0JLU4 | |||
|association_with_transcript=-17bp_to_BC020164_5end | |||
|description=CAGE_peak_11_at_YBX1_5end | |||
|id=chr1:43162358..43162369,+ | |||
|ontology_enrichment_celltype=CL:0002057!8.75e-34!42;CL:0000860!7.21e-31!45;CL:0002009!1.13e-24!65;CL:0002194!4.15e-24!63;CL:0000576!4.15e-24!63;CL:0000040!4.15e-24!63;CL:0000559!4.15e-24!63;CL:0000839!9.68e-24!70;CL:0000557!4.28e-23!71;CL:0000766!1.66e-19!76;CL:0000763!3.66e-19!112;CL:0000049!3.66e-19!112;CL:0002031!2.76e-11!124;CL:0000738!8.92e-11!140;CL:0002032!1.74e-10!165;CL:0000837!1.74e-10!165;CL:0000037!2.86e-10!172;CL:0000566!2.86e-10!172;CL:0002087!9.52e-10!119;CL:0000197!1.02e-09!6;CL:0000098!1.02e-09!6;CL:0002167!1.02e-09!6;CL:0000988!4.54e-09!182 | |||
|ontology_enrichment_celltype_v019=CL:0000235;1.17e-11;6!CL:0000473;5.91e-11;39!CL:0000234;5.91e-11;39!CL:0002539;3.88e-07;10!CL:0000860;9.90e-07;33!CL:0002057;9.90e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,4.20e-13,48;CL:0000234,4.20e-13,48;CL:0000235,1.67e-11,6;CL:0000839,7.61e-11,66;CL:0002194,3.73e-10,59;CL:0000576,3.73e-10,59;CL:0000040,3.73e-10,59;CL:0000559,3.73e-10,59;CL:0000763,3.84e-10,108;CL:0000049,3.84e-10,108;CL:0002009,8.94e-10,61;CL:0000557,9.07e-09,67;CL:0000766,4.67e-08,72;CL:0000860,2.08e-07,42;CL:0002057,2.08e-07,42;CL:0002539,3.18e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.73e-08;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.55e-19!80;UBERON:0001737!1.55e-17!9;UBERON:0001474!2.96e-17!86;UBERON:0004765!3.55e-15!101;UBERON:0001434!3.55e-15!101;UBERON:0002390!5.50e-13!102;UBERON:0003061!5.50e-13!102;UBERON:0002193!9.01e-13!112;UBERON:0002405!3.57e-12!115;UBERON:0002204!1.58e-11!167;UBERON:0001557!3.81e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;9.66e-28;9!UBERON:0001557;9.66e-28;9!UBERON:0004237;3.88e-07;10!UBERON:0004695;3.88e-07;10!UBERON:0002111;3.88e-07;10!UBERON:0004178;3.88e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,4.79e-28,9;UBERON:0001557,4.71e-13,19;UBERON:0002371,1.48e-07,76;UBERON:0004237,3.18e-07,10;UBERON:0004695,3.18e-07,10;UBERON:0002111,3.18e-07,10;UBERON:0004178,3.18e-07,10;UBERON:0001474,6.81e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6893005858071,1.80808358407193,2.19093027116212,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.581592955118259,0.377875943688809,0.485168122375632,0.929716147622738,0,0.309706370895104,0.863077176966451,0.256160706529101,0.47296445977717,1.03423704220986,0,1.35426486594342,0.564727018627814,1.09162460023138,0.674170453335254,0.306083892370903,0.641858054152187,0.639337125799041,0,0.598390972864896,1.27867425159808,0.290209238628584,0,1.24564449799115,0.75374599577023,2.08593167368081,0,0.605399502633369,0.736555271975129,0.632924774881769,1.05627643155971,0.637812899895131,0,0.44931452458598,0,0.16072558669708,0,0.39783335439818,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0.222820913770347,0.294605907474837,0.443067789167242,0.270803863765016,0.384273959177026,0.260118695119756,0,0.276350017785848,0,0,0.267540828089713,1.04535523804977,0.113309342697566,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80823028409406,0,0,0,0,0,0,0,0,0,0,1.51392510525377,0,0,0,0,0,0,0.946454400318751,1.51726221070292,1.68707720918437,0.882351781859152,1.30727666455444,0.71181185733329,1.21348177344148,1.37355025587742,1.15424147083917,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.352226082707465,0,0.462985512576611,0.761016608938393,0,0,0,0,0,0,0.335964256397719,0.425325291727159,0,0,0,0,0,0,0.144119953416961,0,0.126995788584338,0,0,0,0,0,0.571652865261156,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,1.00451418286425,8.43335757932127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27587750330633,0,0,0,0,0,0,0.207970861530807,2.67643483195743,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09629938322967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29848776109822,0,0,0,2.50634477090067,0.846458889008016,0,0,0,0,0,0,0,0,0,0,1.89318974933188,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321506296930038,0.687697182986169,6.64704540846696,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.488105059607853,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0.829412415681711,0,0.521745061811734,0,0.380805212168795,0,0,0,0.928067519756987,0.398095888698616,0,0.686791410365586,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0.163565394255844,0,0,0,0,0,0,0,0,0.279759015438889,0.622077260032973,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62041277132864,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p11@YBX1 | |||
}} |
Revision as of 18:09, 10 January 2014
Short description: | p11@YBX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_YBX1_5end |
Coexpression cluster: | NA |
Association with transcript: | -17bp_to_BC020164_5end |
EntrezGene: | YBX1 |
HGNC: | 8014 |
UniProt: | A0JLU4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 4.20e-13 | 48 |
phagocyte | 4.20e-13 | 48 |
macrophage | 1.67e-11 | 6 |
myeloid lineage restricted progenitor cell | 7.61e-11 | 66 |
monopoietic cell | 3.73e-10 | 59 |
monocyte | 3.73e-10 | 59 |
monoblast | 3.73e-10 | 59 |
promonocyte | 3.73e-10 | 59 |
myeloid cell | 3.84e-10 | 108 |
common myeloid progenitor | 3.84e-10 | 108 |
macrophage dendritic cell progenitor | 8.94e-10 | 61 |
granulocyte monocyte progenitor cell | 9.07e-09 | 67 |
myeloid leukocyte | 4.67e-08 | 72 |
classical monocyte | 2.08e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.08e-07 | 42 |
aortic smooth muscle cell | 3.18e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
larynx | 4.79e-28 | 9 |
upper respiratory tract | 4.71e-13 | 19 |
bone marrow | 1.48e-07 | 76 |
blood vessel smooth muscle | 3.18e-07 | 10 |
arterial system smooth muscle | 3.18e-07 | 10 |
artery smooth muscle tissue | 3.18e-07 | 10 |
aorta smooth muscle tissue | 3.18e-07 | 10 |
bone element | 6.81e-07 | 82 |