FFCP PHASE1:Hg19::chr1:45253840..45253843,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=266675 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17106 | |||
|TSSclassifier=weak | |||
|UniProt=Q8NFU0 | |||
|association_with_transcript=-414bp_to_NM_153274,uc001cmm.2_5end | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_1_at_BEST4_5end | |||
|id=chr1:45253840..45253843,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000059!3.73e-45!11;UBERON:0000160!6.23e-45!27;UBERON:0001155!1.05e-35!9;UBERON:0005409!6.27e-35!35;UBERON:0001154!6.31e-21!1;UBERON:0001153!6.31e-21!1;UBERON:0006834!7.72e-21!1;UBERON:0004907!9.55e-17!5;UBERON:0002108!1.30e-12!14;UBERON:0004921!5.75e-12!129;UBERON:0004185!5.75e-12!129;UBERON:0001007!6.82e-10!155;UBERON:0001555!6.82e-10!155;UBERON:0007026!6.82e-10!155;UBERON:0004119!4.91e-09!169;UBERON:0000925!4.91e-09!169;UBERON:0006595!4.91e-09!169;UBERON:0000063!2.79e-07!97 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;2.02e-76;17!UBERON:0005409;6.11e-60;22!UBERON:0002108;4.20e-51;4!UBERON:0000059;1.93e-41;11!UBERON:0004921;1.22e-37;33!UBERON:0001155;4.66e-29;9!UBERON:0001555;2.95e-15;54!UBERON:0002114;9.90e-11;2!UBERON:0001007;1.32e-09;81!UBERON:0001052;2.52e-08;4!UBERON:0000922;5.06e-07;49!UBERON:0004907;6.58e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.02e-76,17;UBERON:0005409,4.32e-53,25;UBERON:0002108,4.58e-51,4;UBERON:0000059,1.83e-41,11;UBERON:0001155,4.66e-29,9;UBERON:0004921,7.31e-12,118;UBERON:0002114,9.90e-11,2;UBERON:0001007,1.06e-09,145;UBERON:0001555,1.06e-09,145;UBERON:0007026,1.06e-09,145;UBERON:0004119,8.31e-09,160;UBERON:0000925,8.31e-09,160;UBERON:0006595,8.31e-09,160;UBERON:0001052,2.43e-08,4;UBERON:0004907,6.39e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.9194528283346,25.298863447955,18.9419344929424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82631744101899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.9272530688661,1.31135736302374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.1741610430924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p1@BEST4 | |||
}} |
Revision as of 18:18, 10 January 2014
Short description: | p1@BEST4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_BEST4_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | -414bp_to_NM_153274, uc001cmm.2_5end |
EntrezGene: | BEST4 |
HGNC: | 17106 |
UniProt: | Q8NFU0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 2.02e-76 | 17 |
gastrointestinal system | 4.32e-53 | 25 |
small intestine | 4.58e-51 | 4 |
large intestine | 1.83e-41 | 11 |
colon | 4.66e-29 | 9 |
subdivision of digestive tract | 7.31e-12 | 118 |
duodenum | 9.90e-11 | 2 |
digestive system | 1.06e-09 | 145 |
digestive tract | 1.06e-09 | 145 |
primitive gut | 1.06e-09 | 145 |
endoderm-derived structure | 8.31e-09 | 160 |
endoderm | 8.31e-09 | 160 |
presumptive endoderm | 8.31e-09 | 160 |
rectum | 2.43e-08 | 4 |
lower digestive tract | 6.39e-07 | 5 |