FFCP PHASE1:Hg19::chr1:110155671..110155685,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2780 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4394 | |||
|TSSclassifier=strong | |||
|UniProt=P19087 | |||
|association_with_transcript=0bp_to_ENST00000351050_5end | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_2_at_GNAT2_5end | |||
|id=chr1:110155671..110155685,- | |||
|ontology_enrichment_celltype=CL:0000306!2.04e-07!4;CL:0002222!2.04e-07!4;CL:0002224!2.04e-07!4 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.91e-44;3 | |||
|ontology_enrichment_disease=DOID:5409!1.80e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:5409;1.70e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.70e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0001905!1.46e-50!2;UBERON:0002757!1.46e-50!2;UBERON:0010134!1.46e-50!2;UBERON:0002784!1.46e-50!2;UBERON:0005408!1.46e-50!2;UBERON:0001899!1.46e-50!2;UBERON:0003296!6.73e-26!4;UBERON:0010133!6.73e-26!4;UBERON:0000966!8.98e-21!5;UBERON:0005388!8.98e-21!5;UBERON:0001802!8.98e-21!5;UBERON:0000970!3.10e-20!20;UBERON:0002104!2.68e-19!21;UBERON:0000020!1.14e-17!23;UBERON:0001032!5.92e-17!24;UBERON:0004456!5.92e-17!24;UBERON:0001894!2.85e-15!7;UBERON:0006222!2.85e-15!7;UBERON:0000019!2.24e-12!19;UBERON:0000047!2.24e-12!19;UBERON:0004088!2.24e-12!19;UBERON:0003072!2.24e-12!19;UBERON:0003071!2.24e-12!19;UBERON:0004128!2.24e-12!19;UBERON:0001456!2.90e-11!21;UBERON:0003056!3.00e-10!61;UBERON:0005085!2.45e-08!29;UBERON:0010077!2.04e-07!4;UBERON:0005389!2.04e-07!4;UBERON:0000484!2.04e-07!4;UBERON:0002546!2.04e-07!4;UBERON:0000965!2.04e-07!4;UBERON:0001803!2.04e-07!4;UBERON:0003073!2.04e-07!4;UBERON:0005426!2.04e-07!4;UBERON:0003075!2.36e-07!86;UBERON:0007284!2.36e-07!86;UBERON:0002346!4.89e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.45e-66;2!UBERON:0002757;1.45e-66;2!UBERON:0010134;1.45e-66;2!UBERON:0005408;1.45e-66;2!UBERON:0001899;1.45e-66;2!UBERON:0003296;5.98e-34;4!UBERON:0010133;5.98e-34;4!UBERON:0002784;5.98e-34;4!UBERON:0000966;3.55e-27;5!UBERON:0005388;3.55e-27;5!UBERON:0001802;3.55e-27;5!UBERON:0001894;6.48e-20;7!UBERON:0000970;1.29e-15;20!UBERON:0002104;6.53e-15;21!UBERON:0000020;1.10e-13;23!UBERON:0001032;3.78e-13;24!UBERON:0004456;3.78e-13;24!UBERON:0000019;6.36e-08;19!UBERON:0000047;6.36e-08;19!UBERON:0004088;6.36e-08;19!UBERON:0010230;6.36e-08;19!UBERON:0001456;2.95e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.45e-66,2;UBERON:0002757,1.45e-66,2;UBERON:0010134,1.45e-66,2;UBERON:0005408,1.45e-66,2;UBERON:0001899,1.45e-66,2;UBERON:0003296,5.98e-34,4;UBERON:0010133,5.98e-34,4;UBERON:0002784,5.98e-34,4;UBERON:0000966,7.58e-23,6;UBERON:0005388,7.58e-23,6;UBERON:0001802,7.58e-23,6;UBERON:0001894,6.48e-20,7;UBERON:0006222,6.48e-20,7;UBERON:0000970,6.53e-15,21;UBERON:0002104,6.53e-15,21;UBERON:0000020,3.78e-13,24;UBERON:0001032,3.78e-13,24;UBERON:0004456,3.78e-13,24;UBERON:0003056,4.34e-09,61;UBERON:0000019,1.42e-07,20;UBERON:0000047,1.42e-07,20;UBERON:0010312,1.42e-07,20;UBERON:0004088,1.42e-07,20;UBERON:0010230,1.42e-07,20;UBERON:0003072,1.42e-07,20;UBERON:0004128,1.42e-07,20;UBERON:0003071,1.42e-07,20;UBERON:0001456,5.74e-07,22;UBERON:0003075,6.53e-07,82;UBERON:0007284,6.53e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.7509985205877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.7140367175657,9.07966049990825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.79027169678235,5.84650363411088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64910775118144,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@GNAT2 | |||
}} |
Revision as of 19:59, 10 January 2014
Short description: | p2@GNAT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GNAT2_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 0bp_to_ENST00000351050_5end |
EntrezGene: | GNAT2 |
HGNC: | 4394 |
UniProt: | P19087 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 1.45e-66 | 2 |
regional part of epithalamus | 1.45e-66 | 2 |
secretory circumventricular organ | 1.45e-66 | 2 |
circumventricular organ | 1.45e-66 | 2 |
epithalamus | 1.45e-66 | 2 |
gland of diencephalon | 5.98e-34 | 4 |
neuroendocrine gland | 5.98e-34 | 4 |
regional part of diencephalon | 5.98e-34 | 4 |
retina | 7.58e-23 | 6 |
photoreceptor array | 7.58e-23 | 6 |
posterior segment of eyeball | 7.58e-23 | 6 |
diencephalon | 6.48e-20 | 7 |
future diencephalon | 6.48e-20 | 7 |
eye | 6.53e-15 | 21 |
visual system | 6.53e-15 | 21 |
sense organ | 3.78e-13 | 24 |
sensory system | 3.78e-13 | 24 |
entire sense organ system | 3.78e-13 | 24 |
pre-chordal neural plate | 4.34e-09 | 61 |
camera-type eye | 1.42e-07 | 20 |
simple eye | 1.42e-07 | 20 |
immature eye | 1.42e-07 | 20 |
ocular region | 1.42e-07 | 20 |
eyeball of camera-type eye | 1.42e-07 | 20 |
optic cup | 1.42e-07 | 20 |
optic vesicle | 1.42e-07 | 20 |
eye primordium | 1.42e-07 | 20 |
face | 5.74e-07 | 22 |
neural plate | 6.53e-07 | 82 |
presumptive neural plate | 6.53e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.70e-09 | 4 |