FFCP PHASE1:Hg19::chr1:111747111..111747226,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79961 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26192 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000473822_5end | |||
|description=CAGE_peak_2_at_DENND2D_5end | |||
|id=chr1:111747111..111747226,- | |||
|ontology_enrichment_celltype=CL:0002087!2.97e-18!119;CL:0000738!1.52e-17!140;CL:0002031!2.11e-17!124;CL:0000542!5.61e-16!53;CL:0000051!5.61e-16!53;CL:0000838!1.47e-15!52;CL:0000037!5.18e-14!172;CL:0000566!5.18e-14!172;CL:0002032!4.13e-13!165;CL:0000837!4.13e-13!165;CL:0000988!3.21e-12!182;CL:0000945!2.79e-11!24;CL:0000826!2.79e-11!24;CL:0000236!2.31e-08!14;CL:0000791!1.06e-07!18;CL:0000789!1.06e-07!18;CL:0002420!1.06e-07!18;CL:0002419!1.06e-07!18;CL:0000790!1.06e-07!18;CL:0000063!6.90e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000945;6.76e-12;24!CL:0000542;4.96e-10;53!CL:0000236;1.92e-08;13!CL:0000791;3.69e-08;18!CL:0000789;3.69e-08;18!CL:0002419;3.69e-08;18!CL:0000625;9.34e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,5.37e-19,115;CL:0000738,1.66e-18,136;CL:0002031,8.98e-18,120;CL:0000542,2.25e-16,53;CL:0000051,2.25e-16,53;CL:0000838,6.26e-16,52;CL:0000037,1.44e-15,168;CL:0002032,1.76e-14,161;CL:0000837,1.76e-14,161;CL:0000988,5.18e-14,177;CL:0000945,6.68e-12,24;CL:0000826,6.68e-12,24;CL:0000236,8.49e-09,14;CL:0000791,4.29e-08,18;CL:0000789,4.29e-08,18;CL:0002420,4.29e-08,18;CL:0002419,4.29e-08,18;CL:0000790,4.29e-08,18 | |||
|ontology_enrichment_development_v019=CL:0000051;4.96e-10;53!CL:0000790;3.69e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.56e-09!102;UBERON:0003061!3.56e-09!102;UBERON:0002193!2.96e-08!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.07e-09,98;UBERON:0003061,1.07e-09,98;UBERON:0002193,2.20e-08,108;UBERON:0004119,4.16e-08,160;UBERON:0000925,4.16e-08,160;UBERON:0006595,4.16e-08,160 | |||
|phase1_expression=2.18014055124668,2.99740733447376,1.26858963686374,0,4.02264984984559,1.74467704820074,10.1319951267324,3.15859936713415,11.4921676407929,2.7030733015166,2.79120467188971,7.42700665242586,8.70431028153897,0.866364470720326,2.31978163009541,0,1.20538905604795,0,0,0.61560529038394,3.06001036866379,1.56727360739044,0.286235987131057,0.273748850145768,0.502170558379211,4.27915072188527,4.43343183029707,4.25038219093868,4.32700704533794,4.98978217526377,3.8704030829019,2.75826367343678,6.6265302131215,5.17655614233503,9.3735312702165,1.9903692548239,5.87200878669694,2.76997704265939,4.8130667392834,4.55722828503289,8.50878802111712,6.15397965436061,9.01514486719653,4.07115068582781,1.88937971844405,2.42584061187816,3.95129362739664,2.87817521615278,1.85823822537062,1.43846196161075,2.56160706529101,1.18241114944293,2.75796544589295,3.22742341791913,1.35426486594342,2.63539275359647,1.36453075028923,1.34834090667051,2.14258724659632,1.60464513538047,3.19668562899521,2.96866170168044,2.79249120670285,2.13112375266347,2.32167390902867,5.10646702222026,0.622822248995575,2.26123798731069,1.0429658368404,1.95469960234605,0.605399502633369,2.20966581592539,3.16462387440884,2.32380814943136,4.03948169933583,3.35453832813401,6.62738923764321,6.75796017786778,6.10757229448904,3.42015292489498,2.58591680358817,4.20127553658658,10.5597746676794,14.1996038928154,18.6796943311347,12.3751764544287,15.2150475073685,9.77079147922622,18.5092564379761,14.3108063180305,5.69212969109448,4.11066032559657,5.73409842187843,1.32171328579026,4.48406850385229,3.95076127162616,4.13090517239049,5.10913991573914,3.49522548299166,2.17342444007882,4.56291173287027,9.9424039204294,5.84480185223734,3.11949279278486,2.94605907474837,3.76607620792156,2.70803863765016,2.5618263945135,2.47112760363769,4.76869923350661,2.21080014228679,2.31842468588042,6.52460877913066,7.75868401460168,13.589618094647,2.37949619664889,7.66440987203842,5.49803912772208,3.79529538029254,10.1940932583711,16.9281698002669,13.3063286222772,7.37818083481087,8.57510294734603,6.24653632761729,7.34009481336452,7.39015197228942,6.24980903996671,4.54648332831962,4.48955652036677,2.43806866313962,0.670700859703636,1.15076305659177,1.0843174571537,1.00267582127178,3.18662341713812,0.795285947051099,5.35298357332899,1.13441780596881,0.221729397462564,0.702678285545008,3.53643503843824,12.750335090239,8.52804218404188,1.9472843619281,1.74129737299267,1.72845348674525,4.29283123749616,4.0039643754609,4.45749001595478,0.198762407366705,0,0,0,0,0,0,0.258416759169329,0,0.33472061276467,0.402829317109147,0,0.732186172644509,0,0,0.625098097988558,1.34717623575702,1.23872628531654,0,0.949265659568129,0.183201743930407,0,0,7.41359888642308,0,0.379891534993739,0.794455084879313,0.573673241497627,0.709336764396714,1.68203280042692,0,0.74000264525148,0.933633106199299,0.404132016209064,0.163461903113459,0.605429710579726,0.576175924479999,1.87457145467037,0.936480230490962,0.570471821544449,1.34503812496621,0.23486899728753,0.485618833104395,0.280901613404497,1.22492502752936,1.47401180774122,1.85986406116378,2.37600571456411,2.22540236350701,1.82032272387605,3.59309070908119,1.68336113954066,0.375355559615893,1.10825646193673,0.877955241761676,1.22595118319608,1.65261864797256,0.340296549480063,0.717558542755448,0.85422955527427,2.96704661623387,0.600182192168805,1.13357782162283,1.8034837803194,3.53622027030021,0.843881661206331,0.876933046450788,0.504867548488229,2.30124746605748,3.87950536365149,1.06502877754984,1.81353776809752,0.508681776931463,5.9910864480622,4.09119180886252,6.88331028933609,0.121973706129595,0,0.813357600086629,0,0.252320850875628,0,6.25798129319264,1.92972281457866,1.38134921352481,2.78620756819187,9.38443326170461,0,0,0,0,0.217879444092406,0,0,0,0,0.738155454624648,1.40241773803446,1.6462960453256,1.47008711385542,1.26755034821831,4.91413608338813,2.95394953340702,0,5.78045661152634,0.514703430895577,2.52425656439839,3.37205259772859,1.60846355858609,2.87024179991442,1.3032332212413,3.11980435583874,0,0.695582429850461,1.05667824812239,0.433099343283221,0.925971025153221,0.570762456703795,7.90204397959275,4.29243081047436,3.93947209739836,0.936017060556951,2.97262324577457,4.68669169933885,2.35174979478403,2.97727704209012,2.23896306757121,0.581267877027924,0.766765358330422,0.985326475791887,6.25143881493905,10.5737338925794,11.8178361801908,12.1192736089325,0.063497894292169,0.381988425558278,0,0,0.205654985406647,0.300343057843917,0.285826432630578,0.448524337381443,0.43596006883328,0,0.904902010304444,0,0.845302752556,0,0,0.514414748524284,1.41849132023278,0.799266537048298,1.42977993658148,6.51145926469732,2.46972101034231,0.65147236858747,2.48774364119782,1.58390374586686,3.91871190177462,3.48613383440118,4.09889263846434,2.43247561282381,3.01354254859276,2.10833939483032,0.718874566474748,2.29723871668228,0,0.289562613335158,1.2328579353023,0.358121926479791,5.15591662370225,6.5020150866636,3.45004119775228,4.74869234235069,0.254094624222463,0,0,0.167516265334349,0,1.49801404789436,8.97484377612075,4.55857064779639,2.94459580125936,1.50051156317903,0.813795071099207,1.24782516918484,2.49800584316026,4.1002627908823,4.33423235473039,0,0,0,0,0.368738337083406,3.21469373531907,0.391602314925481,1.02943027143257,2.89475236572042,5.60856922128404,6.72383614161699,7.88131685760275,9.98612637062982,16.6314661331324,0.992431231275107,0.61384789315225,1.68396056659844,2.17836553734692,1.53512174720011,3.86049410744658,1.48418066444991,0.771048469013278,0.355123450626254,0.657017248110473,0,0.232420756919918,3.98836183652353,3.20810352485256,4.8802924136025,1.37777337797528,0.182091168006717,1.18011973463482,7.21919380651859,3.15762882128101,3.13739907670742,5.84556898613043,4.64427167128653,2.27466768141793,0.170093705276516,0.431831832204279,0,2.98041081298238,5.01689773854853,4.07802036872061,6.64860807142979,5.37299411333228,0.657779629937804,1.0457418040996,2.05160100093111,3.28014645699706,4.55529752530024,4.6368455241475,0.824125183365091,0.990113999047056,2.87132768998086,0.650060246036521,0,0.386682873168488,0.308097234229289,0.614014698904518,0.964856007391714,1.71872391789238,1.0151168573996,0.767039646744908,0.0890320356467374,3.14041339185858,3.0750410778417,6.12541019974004,6.57525575561074,1.39453664789186,0.31481234683064,0,0.616067160352178,0,0,0.18532421910392,0.143124886741991,0,0.632758849437452,5.14701523594327,2.303080121802,1.71175595213568,1.27281299170375,0,3.77732160924961,3.0199073270966,1.7671860351853,1.01091240786658,0,1.26377536871694,3.90106991271672,0.487426979262569,0,0.409499734223957,1.97967604735198,1.13008116620243,0.551365343546124,0.66343897524122,0.438450885253763,10.9967351510671,6.55894752046633,0.405820753925408,0,0,1.86434757865267,1.76848273823618,1.07001315444375,0.354761064070598,1.47775344708365,5.92730807327823,1.51789269506286,0.699869440489966,5.09977197445214,6.03272047982209,3.26672954583968,4.61304623806218,2.15252686335615,0,3.99087138183008,3.21612760289743,7.61171413848254,2.29391162142713,9.1143549947866,11.6733569974317,9.46133228098247,7.78167973431261,9.18053443304795,10.3106272918255,0,0,3.18552280775341,6.68891430452587,6.63638379691646,0.569134746787313,0.797131363644112,0.399158742865633,1.34053759092657,1.05836791361941,1.94773164164733,1.40398589056729,0,0,0,0,0.321176150207399,6.05399121573143,12.7753871307098,2.40453741329035,13.8258343938806,12.7495381498677,16.8517633129028,7.62013572067957,2.78406173895242,0,0,1.99843180798692,1.4098700508785,6.92419999510413,7.76493350141038,0,0,0,9.78852387424529,14.2543046799667,14.1293922965647,0,0.422008249231538,1.55832187032068,5.60333172370983,3.1668811219199,1.39473591775749,11.6039244523082,10.077309914171,0,11.6930565188016,1.55519793830904,5.84144282457625,6.08671993897071,13.8124539961255,2.56472854656027,2.3948309234694,0,0,1.29875337426592,0,11.7192492488355,6.90933999969946,8.69999490521752,6.03105275913148,3.81380475439149,5.67330436243047,1.72371686620732,0,1.38899995946634,1.77148277162768,0.60298219312704,0,0.774054819518572,0,0.87754158861589,0.435753854075961,1.25481369850743,2.38545801361771,0.113942055847001,0,0,0,4.46601623624687,0.457987967009312,0.533034776018635,4.08773192782946,2.98262487150547,5.318773820805,0,0,0,0,4.92703394839174,0,2.44849212238722,4.09923907158428,0,6.96683351754953,5.48436899920703,3.66618086960175,0,0,0,1.48282492557489,0.802577647298789,0.468528891450678,5.29118888725431,5.28294471116642,0,4.3404284313433,4.83962864194656,0,1.20054501294127,0,0,0,0,0,0,0.853828638089378,0,1.38847790668105,2.05784034570193,6.26826287378898,5.2418000472609,0,1.25783230675811,1.5348756588099,1.8065400551706,5.14041787388623,0,0.677942222341597,0,0,0.569797163602908,5.86654148204409,11.9436642174785,6.83049583165928,7.19314594495669,4.46680293177729,0,1.71594997861965,3.02515075775114,0,5.42096279618629,0,0.313808538937,0,0.288950589901519,0,1.77976992559591,10.2197270453578,3.0083580899397,1.31443677139657,1.11712960508902,1.3749625440701,5.0251111720377,5.39133301347276,0.858452096273142,0.89268582976749,0.335917362433631,1.08089965062721,0,0,0,0,0,4.23366660328922,0,0.953423842781029,0.160753148465019,0.412618309791701,0.415440338029185,0,1.5476039091159,0.850493793212345,3.01891218839339,7.32893077882543,5.5601863423098,0,0,8.44426868205559,1.42939065274673,0,0,0,0,0,3.59190574687462,1.8881279772348,0,0.113312091520126,3.22414914091781,1.32506888912221,0.387848869084652,1.3223260174269,0.855434189421647,8.45778026780006,6.40724475406168,2.67247318669432,5.79934677486074,5.45782623993146,5.3355140612445,6.69859291094928,3.83004754662109,7.61624924717264,13.7879441712485,9.49671287966731,12.7870325976824,1.72759505875258,0,0.122026264901963,0.500763722825999,1.14681839138014,1.66393577305278,1.05563885000352,0,0,0,0,0,0,1.44921028610825,0.597019211547496,2.10341978862502,0.554805861502613,2.84104507912634,2.76724691927833,3.55924488638614,4.34796129954155,3.02461847526478,0.466311601748341,0.147855149989634,1.11507737014592,1.79921244865442,1.08684069813382,0.414706207840855,0.53168342911599,0,5.10875870590543,2.66563648518157,2.03435366602331,0.363697318405119,4.40383283874203,2.32016879939247,0.796191777397232,0.400027764663154,0.686791410365586,1.6837474438296,0,0.192619830407303,2.57329909649911,1.56596575179127,1.13352962756136,6.71415175539119,0,3.76086566271124,5.5584260488975,10.3063503301992,1.76689145945881,1.3503982678964,1.52048196587765,0,0,0.607719912354764,0.691292180758654,0,0.531459361253452,0.163565394255844,0,0,7.8185485642692,0.59996218756479,0,11.5384036372746,0,0,4.47614424702222,1.86623178009892,0,0,0,0.218419276384028,0.169732529954025,0,0.123935764259002,0,0.636008701306837,4.49511946507144,4.80342448971282,1.05802783107205,0,0.449604575675217,1.41696576325585,1.91560630868582,0.41023272848151,0.252071696221718,0.345786262321089,0.484426936895553,2.85538840518309,4.41664733254615,0,0.917142992608395,5.77628330751691,0.381382095467167,0,0,1.95546853708069,0.20170506870352,4.68908406739856,0,1.14640342257068,4.43568258651136,0.675375846183947,0,1.65349437200947,0.697573912132975,0,12.6099286377152,1.48863353516788,0.351742488719241,3.19406069098988,1.07140367175657,0.336283722218824,6.67662164660295,10.2447986108084,1.41923792260222,6.1074013404563,2.57232014156128,0.679697329768317,0.460409414939944,4.72775363535873,0.444925607568277,5.49451649953598,0.471346769748006,6.44625975621715,5.47895232305697,0,13.8547989487245,3.00201485541957,0,0,0,4.81026818838152,2.69381013411948,2.56077715640925,11.0601545890255,4.30227358820278,0,0.0852134047591577,3.38709640152743,4.35303050233695,0,0,3.80308468112494,5.49641308245361,3.65753774946808,0,0.513314034281235,0,2.4285549652957,8.1878812211737,5.17272015419557,0.475680363110274,0.79062257427272,0.329821550236287,5.58562521196692,3.08696632431779,5.02686989159102,4.70317296361523,0.735444965261716,12.9622100905894,1.37415926980462,2.97046400327086,0.4226557275834,1.18948980281472,8.08261694626741,11.6024198352439,1.69899965072379,3.03541695629618,4.2347384605883,5.21568883479594,0.730336388246517,10.0920442348999,1.00337708206016,0.473314686579554,0.407948941145488,0,6.34832208618481,0.371995018166751,7.85698568673411,3.46101249699031,0,0,0,0,0.26721740526556,0,2.25636785363138,3.56159881625725,1.87574891109325,0.829169439458779,1.55149493792843,4.4779136199206,2.14257988317366,10.205047754089,13.1598394307219,1.56984607612859,9.22883795033391,4.44657815708082,4.35433495793923,2.73786640868225,11.3824969594653,5.4508876098434,2.99394320891412,2.03508171527436,4.05563914335319,0,2.42528045687785,2.34640942403454,0.977931553462932,0.406896178315738,7.32332451604064,12.8815227898257,9.93762326140022 | |||
|short_description=p2@DENND2D | |||
}} |
Revision as of 20:08, 10 January 2014
Short description: | p2@DENND2D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DENND2D_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000473822_5end |
EntrezGene: | DENND2D |
HGNC: | 26192 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 5.37e-19 | 115 |
leukocyte | 1.66e-18 | 136 |
hematopoietic lineage restricted progenitor cell | 8.98e-18 | 120 |
lymphocyte | 2.25e-16 | 53 |
common lymphoid progenitor | 2.25e-16 | 53 |
lymphoid lineage restricted progenitor cell | 6.26e-16 | 52 |
hematopoietic stem cell | 1.44e-15 | 168 |
hematopoietic oligopotent progenitor cell | 1.76e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.76e-14 | 161 |
hematopoietic cell | 5.18e-14 | 177 |
lymphocyte of B lineage | 6.68e-12 | 24 |
pro-B cell | 6.68e-12 | 24 |
B cell | 8.49e-09 | 14 |
mature alpha-beta T cell | 4.29e-08 | 18 |
alpha-beta T cell | 4.29e-08 | 18 |
immature T cell | 4.29e-08 | 18 |
mature T cell | 4.29e-08 | 18 |
immature alpha-beta T cell | 4.29e-08 | 18 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.07e-09 | 98 |
blood island | 1.07e-09 | 98 |
hemolymphoid system | 2.20e-08 | 108 |
endoderm-derived structure | 4.16e-08 | 160 |
endoderm | 4.16e-08 | 160 |
presumptive endoderm | 4.16e-08 | 160 |