FFCP PHASE1:Hg19::chr1:145039297..145039308,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9659 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15580 | |||
|TSSclassifier=weak | |||
|UniProt=E9PJ85 | |||
|association_with_transcript=-219bp_to_ENST00000531369_5end | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_55_at_PDE4DIP_5end | |||
|id=chr1:145039297..145039308,- | |||
|ontology_enrichment_celltype=CL:0002057!3.37e-63!42;CL:0000860!1.20e-58!45;CL:0002009!7.36e-46!65;CL:0002194!1.96e-43!63;CL:0000576!1.96e-43!63;CL:0000040!1.96e-43!63;CL:0000559!1.96e-43!63;CL:0000766!6.43e-42!76;CL:0000557!1.39e-41!71;CL:0000839!1.24e-38!70;CL:0000763!3.41e-29!112;CL:0000049!3.41e-29!112;CL:0000738!3.13e-28!140;CL:0002087!6.76e-27!119;CL:0002031!1.02e-25!124;CL:0000037!7.38e-22!172;CL:0000566!7.38e-22!172;CL:0002032!2.57e-21!165;CL:0000837!2.57e-21!165;CL:0002393!3.81e-21!9;CL:0002397!3.81e-21!9;CL:0000988!2.53e-20!182;CL:0000134!9.41e-10!358;CL:0002320!1.94e-09!365;CL:0000219!2.51e-08!390;CL:0000767!3.43e-08!3;CL:0000623!8.00e-08!3;CL:0000825!8.00e-08!3;CL:0000048!5.36e-07!430;CL:0000723!8.28e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0002393;7.14e-38;6!CL:0002397;7.14e-38;6!CL:0000576;1.08e-18;48!CL:0000860;3.38e-17;33!CL:0002057;3.38e-17;33!CL:0000766;9.62e-17;69!CL:0000473;3.18e-15;39!CL:0000234;3.18e-15;39!CL:0002087;8.26e-08;104!CL:0000763;3.40e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.56e-37,42;CL:0002057,1.56e-37,42;CL:0000473,7.15e-33,48;CL:0000234,7.15e-33,48;CL:0002194,2.45e-26,59;CL:0000576,2.45e-26,59;CL:0000040,2.45e-26,59;CL:0000559,2.45e-26,59;CL:0002393,1.63e-25,9;CL:0002397,1.63e-25,9;CL:0002009,1.71e-25,61;CL:0000839,1.33e-23,66;CL:0000557,2.94e-23,67;CL:0000766,1.13e-21,72;CL:0000763,1.54e-14,108;CL:0000049,1.54e-14,108;CL:0002087,1.16e-13,115;CL:0002031,4.25e-13,120;CL:0000738,1.45e-11,136;CL:0002032,9.03e-10,161;CL:0000837,9.03e-10,161;CL:0000037,2.31e-09,168;CL:0000988,6.97e-09,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.44e-27;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.34e-36!80;UBERON:0001474!1.80e-33!86;UBERON:0002390!7.88e-30!102;UBERON:0003061!7.88e-30!102;UBERON:0004765!9.59e-28!101;UBERON:0001434!9.59e-28!101;UBERON:0002193!1.08e-26!112;UBERON:0002405!7.10e-26!115;UBERON:0002204!1.07e-14!167;UBERON:0003081!1.49e-13!216;UBERON:0002384!5.23e-09!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.49e-20,76;UBERON:0001474,4.48e-19,82;UBERON:0004765,2.09e-17,90;UBERON:0002405,7.48e-17,93;UBERON:0002390,5.28e-16,98;UBERON:0003061,5.28e-16,98;UBERON:0001434,1.09e-15,100;UBERON:0002193,1.54e-14,108;UBERON:0002204,2.03e-09,167;UBERON:0003081,9.83e-08,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.767658796194425,0,0,0,0,0,0,0,6.09394949385065,3.81034450193269,3.03815219002193,0,0,0,0,0,0,0,0.822335776043652,0,0.28769239232215,0.768482119587302,0.236482229888585,2.06847408441971,3.87290810150296,4.06279459783025,0,0,0,0.612167784741805,1.60464513538047,1.91801137739712,0.659702600373432,0,0,0,0,0,0.251248665256743,0.521482918420201,0.434377689410233,0.605399502633369,0.736555271975129,0,0.211255286311942,0.212604299965044,0.209658645508376,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p55@PDE4DIP | |||
}} |
Revision as of 20:28, 10 January 2014
Short description: | p55@PDE4DIP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_55_at_PDE4DIP_5end |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | -219bp_to_ENST00000531369_5end |
EntrezGene: | PDE4DIP |
HGNC: | 15580 |
UniProt: | E9PJ85 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.56e-37 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.56e-37 | 42 |
defensive cell | 7.15e-33 | 48 |
phagocyte | 7.15e-33 | 48 |
monopoietic cell | 2.45e-26 | 59 |
monocyte | 2.45e-26 | 59 |
monoblast | 2.45e-26 | 59 |
promonocyte | 2.45e-26 | 59 |
intermediate monocyte | 1.63e-25 | 9 |
CD14-positive, CD16-positive monocyte | 1.63e-25 | 9 |
macrophage dendritic cell progenitor | 1.71e-25 | 61 |
myeloid lineage restricted progenitor cell | 1.33e-23 | 66 |
granulocyte monocyte progenitor cell | 2.94e-23 | 67 |
myeloid leukocyte | 1.13e-21 | 72 |
myeloid cell | 1.54e-14 | 108 |
common myeloid progenitor | 1.54e-14 | 108 |
nongranular leukocyte | 1.16e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 4.25e-13 | 120 |
leukocyte | 1.45e-11 | 136 |
hematopoietic oligopotent progenitor cell | 9.03e-10 | 161 |
hematopoietic multipotent progenitor cell | 9.03e-10 | 161 |
hematopoietic stem cell | 2.31e-09 | 168 |
hematopoietic cell | 6.97e-09 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.49e-20 | 76 |
bone element | 4.48e-19 | 82 |
skeletal element | 2.09e-17 | 90 |
immune system | 7.48e-17 | 93 |
hematopoietic system | 5.28e-16 | 98 |
blood island | 5.28e-16 | 98 |
skeletal system | 1.09e-15 | 100 |
hemolymphoid system | 1.54e-14 | 108 |
musculoskeletal system | 2.03e-09 | 167 |
lateral plate mesoderm | 9.83e-08 | 203 |