FFCP PHASE1:Hg19::chr1:194616937..194616943,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C93 | |||
|description=CAGE_peak_at_chr1:194616937..194616943,- | |||
|id=chr1:194616937..194616943,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;4.22e-11;1 | |||
|ontology_enrichment_disease=DOID:1036!2.55e-10!8 | |||
|ontology_enrichment_disease_v019=DOID:1036;6.24e-21;8!DOID:0060085;2.18e-11;1!DOID:3165;2.18e-11;1!DOID:0060121;2.18e-11;1!DOID:2438;2.18e-11;1!DOID:4418;2.18e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,6.25e-21,8;DOID:0060085,2.18e-11,1;DOID:3165,2.18e-11,1;DOID:0060121,2.18e-11,1;DOID:2438,2.18e-11,1;DOID:4418,2.18e-11,1;DOID:2531,9.41e-07,51;DOID:0060083,9.41e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0001950!1.73e-30!20;UBERON:0001869!1.70e-29!32;UBERON:0001893!1.62e-27!34;UBERON:0002619!1.70e-27!22;UBERON:0002791!2.57e-25!33;UBERON:0002020!1.86e-24!34;UBERON:0003528!1.86e-24!34;UBERON:0000956!7.16e-24!25;UBERON:0000203!7.16e-24!25;UBERON:0002780!4.44e-22!41;UBERON:0001890!4.44e-22!41;UBERON:0006240!4.44e-22!41;UBERON:0003080!1.90e-21!42;UBERON:0000200!1.28e-18!6;UBERON:0003056!1.49e-16!61;UBERON:0001049!2.88e-16!57;UBERON:0005068!2.88e-16!57;UBERON:0006241!2.88e-16!57;UBERON:0007135!2.88e-16!57;UBERON:0002616!1.49e-15!59;UBERON:0000955!1.61e-15!69;UBERON:0006238!1.61e-15!69;UBERON:0001017!4.71e-15!82;UBERON:0005743!4.34e-14!86;UBERON:0000073!1.51e-13!94;UBERON:0001016!1.51e-13!94;UBERON:0002346!3.96e-13!90;UBERON:0003075!1.19e-12!86;UBERON:0007284!1.19e-12!86;UBERON:0007023!1.56e-12!115;UBERON:0002021!7.23e-11!5;UBERON:0002771!4.71e-10!3;UBERON:0001871!1.97e-09!7;UBERON:0000153!3.51e-09!129;UBERON:0007811!3.51e-09!129;UBERON:0000033!5.38e-09!123;UBERON:0001870!1.28e-07!2;UBERON:0000064!8.80e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0002021;1.43e-18;5!UBERON:0001950;1.39e-16;20!UBERON:0002619;4.11e-15;22!UBERON:0000956;2.51e-13;25!UBERON:0000203;2.51e-13;25!UBERON:0000941;4.22e-11;1!UBERON:0001785;4.22e-11;1!UBERON:0002464;4.22e-11;1!UBERON:0004904;4.22e-11;1!UBERON:0001021;4.22e-11;1!UBERON:0002791;8.03e-11;32!UBERON:0001869;3.17e-10;32!UBERON:0001893;6.81e-09;34!UBERON:0001872;9.57e-09;5!UBERON:0003528;4.27e-08;34!UBERON:0002020;4.27e-08;34!UBERON:0002780;2.45e-07;41!UBERON:0001890;2.45e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.16e-18,5;UBERON:0001950,1.44e-16,20;UBERON:0002619,4.27e-15,22;UBERON:0000956,2.60e-13,25;UBERON:0000203,2.60e-13,25;UBERON:0000941,3.63e-11,1;UBERON:0001785,3.63e-11,1;UBERON:0002464,3.63e-11,1;UBERON:0004904,3.63e-11,1;UBERON:0001021,3.63e-11,1;UBERON:0003902,3.63e-11,1;UBERON:0005425,3.63e-11,1;UBERON:0002791,2.10e-10,32;UBERON:0001869,2.10e-10,32;UBERON:0003528,8.71e-10,34;UBERON:0002020,8.71e-10,34;UBERON:0001893,8.71e-10,34;UBERON:0001872,1.08e-08,5;UBERON:0002780,4.38e-08,41;UBERON:0001890,4.38e-08,41;UBERON:0003080,4.38e-08,41;UBERON:0006240,4.38e-08,41;UBERON:0001016,1.75e-07,89;UBERON:0003056,3.99e-07,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0.474541238222193,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.69544237579135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00299045849731,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,1.93866549219044,0.556608588971108,0,0,0,0,0,3.81380475439149,0,0.689486746482929,0,0.173624994933292,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,2.93347904189422,0,0,0,0,0.156980256395025,0,14.2125266188824,17.6456280885966,10.0692952185506,8.34916423986414,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0.416024019039416,0,0,0,0,0,0,0,0,0,0,0,0,2.78200456384186,0.759729551470544,0,3.20635281006135,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242998226632099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65820453990096,0.366078794705889,0.3755727921195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.967809053062115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371807292777007,0,0,0,0,0,0,0.385375350578757,2.8339315265117,3.51194489925733,1.43581454968528,0,0.345786262321089,0.484426936895553,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.675375846183947,0,1.03343398250592,1.33173201407204,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.328863867814245,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271965960763659,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0.267964130156178,0,0,0.213233981900981,0,0,0,1.34558235096736,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:194616937..194616943,- | |||
}} |
Revision as of 23:03, 10 January 2014
Short description: | p@chr1:194616937..194616943, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:194616937..194616943, - |
Coexpression cluster: | C93_chronic_acute_leukemia_acantholytic_medulloblastoma_testis_papillotubular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.16e-18 | 5 |
neocortex | 1.44e-16 | 20 |
regional part of cerebral cortex | 4.27e-15 | 22 |
cerebral cortex | 2.60e-13 | 25 |
pallium | 2.60e-13 | 25 |
cranial nerve II | 3.63e-11 | 1 |
cranial nerve | 3.63e-11 | 1 |
nerve trunk | 3.63e-11 | 1 |
nerve connecting eye with brain | 3.63e-11 | 1 |
nerve | 3.63e-11 | 1 |
retinal neural layer | 3.63e-11 | 1 |
presumptive neural retina | 3.63e-11 | 1 |
regional part of telencephalon | 2.10e-10 | 32 |
cerebral hemisphere | 2.10e-10 | 32 |
brain grey matter | 8.71e-10 | 34 |
gray matter | 8.71e-10 | 34 |
telencephalon | 8.71e-10 | 34 |
parietal lobe | 1.08e-08 | 5 |
regional part of forebrain | 4.38e-08 | 41 |
forebrain | 4.38e-08 | 41 |
anterior neural tube | 4.38e-08 | 41 |
future forebrain | 4.38e-08 | 41 |
nervous system | 1.75e-07 | 89 |
pre-chordal neural plate | 3.99e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 6.25e-21 | 8 |
organ system benign neoplasm | 2.18e-11 | 1 |
skin benign neoplasm | 2.18e-11 | 1 |
integumentary system benign neoplasm | 2.18e-11 | 1 |
dermis tumor | 2.18e-11 | 1 |
cutaneous fibrous histiocytoma | 2.18e-11 | 1 |
hematologic cancer | 9.41e-07 | 51 |
immune system cancer | 9.41e-07 | 51 |