FFCP PHASE1:Hg19::chr1:198665947..198665962,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=5788 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9666 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-47bp_to_ENST00000484135_5end | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_8_at_PTPRC_5end | |||
|id=chr1:198665947..198665962,+ | |||
|ontology_enrichment_celltype=CL:0002087!1.46e-47!119;CL:0000037!5.09e-47!172;CL:0000566!5.09e-47!172;CL:0000738!4.43e-46!140;CL:0000988!2.55e-43!182;CL:0002032!4.19e-43!165;CL:0000837!4.19e-43!165;CL:0002031!6.40e-41!124;CL:0002057!2.08e-35!42;CL:0000860!2.04e-32!45;CL:0000766!1.43e-23!76;CL:0002194!3.91e-23!63;CL:0000576!3.91e-23!63;CL:0000040!3.91e-23!63;CL:0000559!3.91e-23!63;CL:0002009!3.83e-22!65;CL:0000763!1.98e-21!112;CL:0000049!1.98e-21!112;CL:0000839!2.63e-21!70;CL:0000542!7.07e-21!53;CL:0000051!7.07e-21!53;CL:0000557!7.08e-21!71;CL:0000838!1.05e-19!52;CL:0000134!1.17e-13!358;CL:0000945!1.25e-13!24;CL:0000826!1.25e-13!24;CL:0002320!4.99e-13!365;CL:0000219!7.89e-11!390;CL:0002393!3.46e-10!9;CL:0002397!3.46e-10!9;CL:0000236!6.49e-09!14;CL:0000048!2.94e-08!430;CL:0000723!6.71e-08!436;CL:0000623!1.18e-07!3;CL:0000825!1.18e-07!3;CL:0000034!1.93e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000623;2.78e-20;3!CL:0000236;1.08e-12;13!CL:0000542;6.21e-11;53!CL:0002087;7.63e-10;104!CL:0000226;9.71e-10;3!CL:0000842;9.71e-10;3!CL:0000945;2.09e-09;24!CL:0000860;2.59e-08;33!CL:0002057;2.59e-08;33!CL:0000738;3.09e-08;136!CL:0000785;3.93e-08;1!CL:0000819;3.93e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,3.89e-25,115;CL:0000738,8.97e-23,136;CL:0000623,2.78e-20,3;CL:0000825,2.78e-20,3;CL:0002031,2.02e-19,120;CL:0000037,1.40e-17,168;CL:0000988,1.87e-16,177;CL:0000838,6.55e-16,52;CL:0000542,1.44e-15,53;CL:0000051,1.44e-15,53;CL:0002032,4.60e-15,161;CL:0000837,4.60e-15,161;CL:0000236,9.88e-12,14;CL:0000860,7.28e-11,42;CL:0002057,7.28e-11,42;CL:0000226,7.15e-10,3;CL:0000842,7.15e-10,3;CL:0000945,2.44e-09,24;CL:0000826,2.44e-09,24;CL:0000473,2.49e-09,48;CL:0000234,2.49e-09,48;CL:0000819,3.55e-08,1;CL:0002194,3.46e-07,59;CL:0000576,3.46e-07,59;CL:0000040,3.46e-07,59;CL:0000559,3.46e-07,59;CL:0000766,4.28e-07,72;CL:0002009,6.53e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000051;6.21e-11;53!CL:0002057;2.27e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060073;3.93e-08;1!DOID:8675;3.93e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,3.55e-08,1;DOID:8675,3.55e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!8.34e-24!102;UBERON:0003061!8.34e-24!102;UBERON:0002193!2.82e-23!112;UBERON:0002371!8.87e-19!80;UBERON:0001474!8.18e-17!86;UBERON:0002405!5.01e-16!115;UBERON:0004765!5.84e-13!101;UBERON:0001434!5.84e-13!101;UBERON:0002384!9.28e-13!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;5.89e-08;1!UBERON:0002171;1.26e-07;1!UBERON:0006518;1.26e-07;1!UBERON:0008949;1.26e-07;1!UBERON:0000101;1.26e-07;1!UBERON:0002167;1.26e-07;1!UBERON:0000178;4.07e-07;15!UBERON:0000179;4.07e-07;15!UBERON:0000463;4.07e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,8.03e-09,108;UBERON:0002390,1.86e-08,98;UBERON:0003061,1.86e-08,98;UBERON:0000029,4.66e-08,1;UBERON:0002171,1.04e-07,1;UBERON:0006518,1.04e-07,1;UBERON:0008949,1.04e-07,1;UBERON:0000101,1.04e-07,1;UBERON:0002167,1.04e-07,1;UBERON:0000178,3.55e-07,15;UBERON:0000179,3.55e-07,15;UBERON:0000463,3.55e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06978768047132,0.328402357799783,0.236132343941038,0,0.767658796194425,0.309632246632152,0,0,0,0.232401601740905,0.568676929949686,0.293600439334847,0,2.00544447470142,1.73608696572681,0,0,0,0.145398238779565,0,1.4555043671269,1.16214518452842,0,0.309706370895104,0.863077176966451,1.7931249457037,0.236482229888585,0.689491361473237,0.645484683583826,0,0.752969358170419,0.272906150057846,0.449446968890169,1.53041946185451,0,0.639337125799041,3.29851300186716,0.997318288108159,1.70489900213078,0.870627715885752,1.13477044938228,0,0.75374599577023,0.521482918420201,0,0,0.736555271975129,0,0.633765858935825,0.212604299965044,0,0,0.150176892841506,0,0.285012743741249,0.99458338599545,0.365328307529268,0,0,0,0,0.800791974072025,1.14950487990897,0.661044872784862,0,2.27685187643779,7.6340834618222,4.20500550937752,0,0,0,0,2.75107533924415,0.411202997999018,0.334372990781356,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,1.03800594213442,0.535081656179426,2.09071047609954,0,0,0,0,0,0,0,0,0.511946444617674,0,0,0.821127996921047,0,3.7441627409691,2.60683926989038,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0.132957960518865,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18218456121156,3.66566877261179,2.95188983443421,0,0,0,0,0,0,26.9245313283622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.03999762292127,1.921096040462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0,0,0,0.540031437238115,1.58625035258854,0,0,0,0.371606350251437,0,0,0.159426272728822,0.59873811429845,0,0.211673582723883,0,0.561594356226918,0,0,0,0.338583555603207,0,0.201799707191048,0,0,0,0,0,0.390776190804081,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31396051279005,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,3.83155057352899,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,1.65695622138878,2.97699613087171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576169937778896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.751871343838829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852935927603924,0,0.129177819672012,0.0620747142958579,0,0,0.202117188958219,0,0,0.336760265072938,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.603821380773079,0.320568492303233 | |||
|short_description=p8@PTPRC | |||
}} |
Revision as of 23:10, 10 January 2014
Short description: | p8@PTPRC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_8_at_PTPRC_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | -47bp_to_ENST00000484135_5end |
EntrezGene: | PTPRC |
HGNC: | 9666 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 3.89e-25 | 115 |
leukocyte | 8.97e-23 | 136 |
natural killer cell | 2.78e-20 | 3 |
pro-NK cell | 2.78e-20 | 3 |
hematopoietic lineage restricted progenitor cell | 2.02e-19 | 120 |
hematopoietic stem cell | 1.40e-17 | 168 |
hematopoietic cell | 1.87e-16 | 177 |
lymphoid lineage restricted progenitor cell | 6.55e-16 | 52 |
lymphocyte | 1.44e-15 | 53 |
common lymphoid progenitor | 1.44e-15 | 53 |
hematopoietic oligopotent progenitor cell | 4.60e-15 | 161 |
hematopoietic multipotent progenitor cell | 4.60e-15 | 161 |
B cell | 9.88e-12 | 14 |
classical monocyte | 7.28e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.28e-11 | 42 |
single nucleate cell | 7.15e-10 | 3 |
mononuclear cell | 7.15e-10 | 3 |
lymphocyte of B lineage | 2.44e-09 | 24 |
pro-B cell | 2.44e-09 | 24 |
defensive cell | 2.49e-09 | 48 |
phagocyte | 2.49e-09 | 48 |
B-1 B cell | 3.55e-08 | 1 |
monopoietic cell | 3.46e-07 | 59 |
monocyte | 3.46e-07 | 59 |
monoblast | 3.46e-07 | 59 |
promonocyte | 3.46e-07 | 59 |
myeloid leukocyte | 4.28e-07 | 72 |
macrophage dendritic cell progenitor | 6.53e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 8.03e-09 | 108 |
hematopoietic system | 1.86e-08 | 98 |
blood island | 1.86e-08 | 98 |
lymph node | 4.66e-08 | 1 |
lower lobe of right lung | 1.04e-07 | 1 |
right lung lobe | 1.04e-07 | 1 |
lower lobe of lung | 1.04e-07 | 1 |
lobe of lung | 1.04e-07 | 1 |
right lung | 1.04e-07 | 1 |
blood | 3.55e-07 | 15 |
haemolymphatic fluid | 3.55e-07 | 15 |
organism substance | 3.55e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 3.55e-08 | 1 |
lymphosarcoma | 3.55e-08 | 1 |