FFCP PHASE1:Hg19::chr1:226076843..226076847,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=10637 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6552 | |||
|TSSclassifier=strong | |||
|UniProt=O75610 | |||
|association_with_transcript=0bp_to_ENST00000272134,NM_020997_5end | |||
|coexpression_cluster_id=C130 | |||
|description=CAGE_peak_2_at_LEFTY1_5end | |||
|id=chr1:226076843..226076847,- | |||
|ontology_enrichment_celltype=CL:0002322!7.57e-14!5;CL:0002504!2.13e-07!3;CL:1000279!2.13e-07!3;CL:1000280!2.13e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002322;6.99e-28;5!CL:0000039;9.16e-13;7!CL:0000586;9.16e-13;7!CL:0000540;2.25e-09;6!CL:0000404;2.25e-09;6!CL:0002321;3.81e-09;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,6.44e-28,5;CL:0000039,1.04e-12,7;CL:0000586,1.04e-12,7;CL:0000540,2.26e-09,6;CL:0000031,2.26e-09,6;CL:0000404,2.26e-09,6;CL:0000047,3.98e-07,8;CL:0000313,9.79e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.89e-33;10!UBERON:0005564;3.89e-33;10!CL:0000031;2.25e-09;6!UBERON:0001045;8.75e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2152,9.79e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0003135!6.19e-18!11;UBERON:0000059!3.41e-17!11;UBERON:0001155!9.99e-17!9;UBERON:0003101!5.86e-14!22;UBERON:0000079!5.86e-14!22;UBERON:0005156!4.38e-13!59;UBERON:0000990!4.38e-13!59;UBERON:0003133!1.77e-12!48;UBERON:0000473!1.88e-11!8;UBERON:0000160!1.01e-08!27;UBERON:0005409!1.14e-08!35;UBERON:0000991!1.79e-08!21;UBERON:0009196!1.79e-08!21;UBERON:0009117!1.79e-08!21;UBERON:0005564!1.79e-08!21;UBERON:0004921!2.55e-08!129;UBERON:0004185!2.55e-08!129;UBERON:0004176!5.29e-08!22;UBERON:0000466!9.41e-08!126;UBERON:0003886!2.16e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0003135;2.03e-23;11!UBERON:0000473;6.69e-17;8!UBERON:0000991;3.56e-15;21!UBERON:0000922;1.41e-13;49!UBERON:0000059;1.09e-12;11!UBERON:0003101;2.84e-11;22!UBERON:0000079;2.84e-11;22!UBERON:0003133;1.06e-10;44!UBERON:0000160;1.17e-10;17!UBERON:0001155;2.98e-10;9!UBERON:0006947;3.23e-08;3!UBERON:0004054;3.23e-08;3!UBERON:0005409;3.29e-08;22!UBERON:0001301;4.43e-07;1!UBERON:0001154;8.75e-07;1!UBERON:0001153;8.75e-07;1!UBERON:0009854;8.75e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,2.29e-23,11;UBERON:0000473,7.65e-17,8;UBERON:0000991,3.36e-15,21;UBERON:0009196,3.36e-15,21;UBERON:0009117,3.36e-15,21;UBERON:0005564,3.36e-15,21;UBERON:0004176,1.87e-14,22;UBERON:0003133,1.11e-13,48;UBERON:0000059,1.12e-12,11;UBERON:0003101,3.01e-11,22;UBERON:0000079,3.01e-11,22;UBERON:0005156,1.07e-10,59;UBERON:0000990,1.07e-10,59;UBERON:0000160,1.17e-10,17;UBERON:0001155,3.05e-10,9;UBERON:0003886,4.95e-10,54;UBERON:0002553,1.20e-08,61;UBERON:0006947,3.17e-08,3;UBERON:0004054,3.17e-08,3;UBERON:0002323,4.85e-08,46;UBERON:0004458,1.85e-07,49;UBERON:0005409,3.43e-07,25;UBERON:0001301,4.43e-07,1;UBERON:0001154,8.27e-07,1;UBERON:0001153,8.27e-07,1;UBERON:0001045,8.27e-07,1;UBERON:0004911,9.79e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.48881677583179,12.8553875271841,8.24976994373581,10.6770886665832,14.1299676490352,86.4996341009717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0.784349769176855,1.46139224653261,0,0,0,0,1.54227252690289,0.541892875087706,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,3.20515328328254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97311047956066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,65.6872874511813,19.0183763682179,12.2206028986725,0,0,0,0,0,0,0,0,0,1.57833761139756,4.83962864194656,0,0,0,0,0,0,0,0,0,1.10939738410511,4.33899345837827,0,0,19.0452068383813,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315132729228895,0.247247575143499,0.13480708770837,0.0984274815147488,0,0,0,118.475070418719,83.3488985779237,90.1505533523332,0,0,0,0,3.07342258466873,1.99327434912993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0.106787412567695,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37478448758317,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,1.72983755203292,0,39.0757005616546,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.39246546425257,0,0,12.7842220871329,0,0,0.0714765441766563,0,0,0.521574816907738,0,0,0,0,0,0,0,0,0,0,0,3.69122924932715,0,0,0,0,0,0.485710993059139,0.233939463462106,0,0,0,0,1.66059127923341,0,0,0.470317296361523,0,0,0,0,0,0,0,0.0644578879735772,0.0999411559249289,0,0,0,0,0,0,0,0,0,2.645134202577,0,0,0,1.7663299476911,0,0,1.01988829741982,5.34434810531121,7.35159196278759,19.3044805255129,2.57647573942014,0.535928260312357,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0.286888821570705,0,0,0,0,0,0,0.488965776731466,2.03448089157869,0,0,0 | |||
|short_description=p2@LEFTY1 | |||
}} |
Revision as of 00:27, 11 January 2014
Short description: | p2@LEFTY1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_LEFTY1_5end |
Coexpression cluster: | C130_iPS_HES3GFP_H9_teratocarcinoma_testicular_colon_Alveolar |
Association with transcript: | 0bp_to_ENST00000272134, NM_020997_5end |
EntrezGene: | LEFTY1 |
HGNC: | 6552 |
UniProt: | O75610 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 6.44e-28 | 5 |
germ line cell | 1.04e-12 | 7 |
germ cell | 1.04e-12 | 7 |
neuron | 2.26e-09 | 6 |
neuroblast | 2.26e-09 | 6 |
electrically signaling cell | 2.26e-09 | 6 |
neuronal stem cell | 3.98e-07 | 8 |
serous secreting cell | 9.79e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 2.29e-23 | 11 |
testis | 7.65e-17 | 8 |
gonad | 3.36e-15 | 21 |
indifferent external genitalia | 3.36e-15 | 21 |
indifferent gonad | 3.36e-15 | 21 |
gonad primordium | 3.36e-15 | 21 |
external genitalia | 1.87e-14 | 22 |
reproductive organ | 1.11e-13 | 48 |
large intestine | 1.12e-12 | 11 |
male organism | 3.01e-11 | 22 |
male reproductive system | 3.01e-11 | 22 |
reproductive structure | 1.07e-10 | 59 |
reproductive system | 1.07e-10 | 59 |
intestine | 1.17e-10 | 17 |
colon | 3.05e-10 | 9 |
body cavity precursor | 4.95e-10 | 54 |
anatomical cavity | 1.20e-08 | 61 |
male genital duct | 3.17e-08 | 3 |
internal male genitalia | 3.17e-08 | 3 |
body cavity | 4.85e-08 | 46 |
body cavity or lining | 1.85e-07 | 49 |
gastrointestinal system | 3.43e-07 | 25 |
epididymis | 4.43e-07 | 1 |
vermiform appendix | 8.27e-07 | 1 |
caecum | 8.27e-07 | 1 |
midgut | 8.27e-07 | 1 |
epithelium of female gonad | 9.79e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 9.79e-07 | 1 |