FFCP PHASE1:Hg19::chr10:12171721..12171732,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55176 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17702 | |||
|TSSclassifier=strong | |||
|UniProt=A6NIF9,F8W776 | |||
|association_with_transcript=0bp_to_ENST00000379017,ENST00000379020_5end | |||
|description=CAGE_peak_2_at_SEC61A2_5end | |||
|id=chr10:12171721..12171732,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000623;2.48e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,2.40e-10,3;CL:0000825,2.40e-10,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.04e-14!82;UBERON:0005743!4.28e-13!86;UBERON:0000073!5.67e-13!94;UBERON:0001016!5.67e-13!94;UBERON:0001049!6.94e-13!57;UBERON:0005068!6.94e-13!57;UBERON:0006241!6.94e-13!57;UBERON:0007135!6.94e-13!57;UBERON:0002780!1.41e-11!41;UBERON:0001890!1.41e-11!41;UBERON:0006240!1.41e-11!41;UBERON:0003080!6.19e-11!42;UBERON:0000955!1.82e-10!69;UBERON:0006238!1.82e-10!69;UBERON:0001893!2.34e-10!34;UBERON:0002791!9.19e-10!33;UBERON:0002616!1.02e-09!59;UBERON:0001869!2.24e-09!32;UBERON:0002020!4.50e-09!34;UBERON:0003528!4.50e-09!34;UBERON:0002346!2.09e-08!90;UBERON:0000033!3.61e-08!123;UBERON:0000153!4.13e-08!129;UBERON:0007811!4.13e-08!129;UBERON:0003075!1.46e-07!86;UBERON:0007284!1.46e-07!86;UBERON:0000956!1.57e-07!25;UBERON:0000203!1.57e-07!25;UBERON:0002619!2.90e-07!22;UBERON:0007023!5.00e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.33e-13;20!UBERON:0001893;2.61e-12;34!UBERON:0002619;3.03e-12;22!UBERON:0000956;1.33e-10;25!UBERON:0000203;1.33e-10;25!UBERON:0001869;1.62e-10;32!UBERON:0003528;3.06e-09;34!UBERON:0002020;3.06e-09;34!UBERON:0002791;5.42e-09;32!UBERON:0002780;1.32e-08;41!UBERON:0001890;1.32e-08;41!UBERON:0000073;1.47e-07;53!UBERON:0002616;1.47e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.25e-13,20;UBERON:0001893,7.22e-13,34;UBERON:0002619,2.87e-12,22;UBERON:0000073,1.00e-11,53;UBERON:0002616,1.00e-11,53;UBERON:0001869,1.43e-11,32;UBERON:0001049,6.55e-11,56;UBERON:0005068,6.55e-11,56;UBERON:0006241,6.55e-11,56;UBERON:0007135,6.55e-11,56;UBERON:0003528,1.04e-10,34;UBERON:0002020,1.04e-10,34;UBERON:0000956,1.27e-10,25;UBERON:0000203,1.27e-10,25;UBERON:0002780,3.07e-10,41;UBERON:0001890,3.07e-10,41;UBERON:0003080,3.07e-10,41;UBERON:0006240,3.07e-10,41;UBERON:0002791,1.37e-09,32;UBERON:0001017,2.09e-08,81;UBERON:0003075,2.39e-08,82;UBERON:0007284,2.39e-08,82;UBERON:0000955,3.30e-08,68;UBERON:0006238,3.30e-08,68;UBERON:0002346,8.84e-08,86;UBERON:0001016,3.42e-07,89;UBERON:0003056,4.10e-07,61 | |||
|phase1_expression=0,0.214100523890983,0.281908808191942,0,0,0,0,0,0,0.737201809504527,0,0,0,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0.572471974262113,0.136874425072884,0.251085279189606,0.61130724598361,0.410502947249729,0.472264687882075,1.18009283054671,0,0,0,0,0.369754010166788,0.46480320348181,0.710846162437108,0.293600439334847,0,0.601633342410425,0.434021741431704,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0.645484683583826,1.35426486594342,0.376484679085209,0,0,0,0,0,0.329851300186716,0.598390972864896,0,0,0,0,0,0,0.434377689410233,0,0.736555271975129,0.632924774881769,0,0,0,0,0,0,0.285012743741249,0,0.182664153764634,0,0,0,0.426730222566507,0.400395987036012,0,0,0,1.1384259382189,2.34894875748376,0.382273228125229,1.32171328579026,1.12101712596307,0.263384084775077,1.37696839079683,1.17903228824749,2.05601498999509,0,0.651844533267181,0,0,0.111410456885174,0.294605907474837,0,0,0,0.130059347559878,0.328875809207352,0,0.289803085735052,0.296573126324121,0.267540828089713,1.04535523804977,0.113309342697566,0,0.34362744548263,0.759059076058509,0,0,0,0.301150238155546,0.127986611154418,0,0.236777252044017,0,1.81446068902259,2.13952156626806,1.30341963494519,0,0,0,0,0,0,1.5905718941022,0.486634870302636,0,0,0.175669571386252,1.0478326039817,0,0,0,0,0.132957960518865,0.715471872916026,4.0039643754609,2.97166001063652,0.198762407366705,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0,0,3.87780264148325,0.436094052142534,0,0.12663051166458,0.662045904066094,0.286836620748814,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0.570471821544449,0,0,0,0.140450806702248,0.204154171254893,0,0,0,0.247266929278557,0,0,0.168336113954066,0,0,0.438977620880838,0,0,0.113432183160021,0,0.213557388818567,0,0.300091096084402,0.206105058476878,0,0.18611685633159,0.337552664482532,0.194874010322397,0.252433774244115,0,0,0,0.10075209822764,0.169560592310488,0.57978255948989,0.818238361772504,0.573609190778008,0.487894824518382,0.265059536642971,0.116193942869518,0.518305275076852,0.756962552626885,0.36497735907583,0,0,0,0,0.721879481669586,0.236613600079688,0.505754070234305,0,0.441175890929576,0.217879444092406,0.71181185733329,0,0.392442930250692,0.38474715694639,0,0,0.4115740113314,0,0,0,0,0,0.368965315629341,0.686271241194102,0,0,0,0.0925884451585296,0.325808305310325,0,0,0.231860809950154,0,0.144366447761074,0,0,0.790204397959275,0,0,0,0.148631162288728,0,0.671928512795438,0.425325291727159,0.0895585227028483,0.290633938513962,0,0,0.088048434013226,0,0.144119953416961,0.12624243342638,0.253991577168676,0,0,0,0.205654985406647,0,0,0.224262168690721,0.43596006883328,0,0.258543431515556,0,0,0,1.04007436911366,0,0,0,0.142977993658148,0.542621605391443,0,0.325736184293735,0,0,0.602878754119172,0,0.299918973546171,0,0,0,0.958499421966331,0,0,0,0,0.179060963239896,0.448340575974109,1.18218456121156,1.2937654491571,1.41177339907723,0.76228387266739,0,0.773288812777695,1.34013012267479,1.27587750330633,0,0,3.31532410748828,0,0,0,0,0.356857977594324,0.157702415033935,0,0,0,1.03473071292505,0,0.184369168541703,0.173767228936166,0,0.343143423810856,0.413536052245775,0,0.106727557803444,2.12189300012382,0,0,0,0.306923946576125,0,0.256278298511402,0.511707249066704,0.160853921143607,0,0.154209693802656,0,0.0821271560138091,0,0.232420756919918,0.846016147141356,0.40101294060657,0.276242966807689,0.229628896329213,0,0.131124414959424,0,0,0,1.46139224653261,0,1.13733384070897,0,0,0,0,0.501689773854853,0.254876273045038,0,0.447749509444357,0.219259876645935,0,0,0,0,0.103041011647722,0.457847324091717,0.247528499761764,0,0,0,0.096670718292122,0.462145851343933,0.15350367472613,0,0.214840489736547,0,0.0852266274161009,0.0890320356467374,0,0,1.65896526242959,0,0.464845549297286,0.31481234683064,0,0,0,0,0.37064843820784,0.143124886741991,0,0.316379424718726,0,0.255897791311334,0,0,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0.487426979262569,0,0.136499911407986,0.565621727814851,1.13008116620243,0,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0,0,0,0,0,1.13841952129715,0,0,0,0,0,0.86101074534246,0,0,0,0,0.764637207142375,0,0,0.411362273086194,0.648473311192717,1.08006287447623,0,0.106824071127473,1.92495971052672,0,0.371606350251437,0.28853842595289,0.782560276832555,0.159426272728822,0,0.191505370132367,0,0,0,0,0,0,0,0.642352300414798,0.403599414382095,0,0,0.307240764308458,0.447352215784832,0.166849141711909,0,0,0,0.540911356951966,0.33307196799782,0,0,0,0.121360521749513,0.111443384277478,0.568272293612826,0.71623345421307,0,0.921482106297696,0.994147647766298,0.562677665642051,0.222617410045812,0,1.90012867315194,0,0.276283915531148,0.251932747854276,0,0.369254416383208,0,0.179736702294654,0,1.53471711068062,0,0,0,0.969332746095218,0.371072392647405,0,0,0.174919999992391,0,0.1137934482855,0,0,0.344743373241465,0,0.347249989866585,0,0.361789315876224,0,0.663475559587348,0.591095237907095,0.658156191461918,0,0,0.153900517007594,0.341826167541004,0.23056390438806,0.0897576444097721,0,0,0.0915975934018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| |||
|short_description=p2@SEC61A2 | |||
}} |
Revision as of 01:44, 11 January 2014
Short description: | p2@SEC61A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SEC61A2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000379017, ENST00000379020_5end |
EntrezGene: | SEC61A2 |
HGNC: | 17702 |
UniProt: | A6NIF9F8W776 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 2.40e-10 | 3 |
pro-NK cell | 2.40e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
neocortex | 1.25e-13 | 20 |
telencephalon | 7.22e-13 | 34 |
regional part of cerebral cortex | 2.87e-12 | 22 |
regional part of nervous system | 1.00e-11 | 53 |
regional part of brain | 1.00e-11 | 53 |
cerebral hemisphere | 1.43e-11 | 32 |
neural tube | 6.55e-11 | 56 |
neural rod | 6.55e-11 | 56 |
future spinal cord | 6.55e-11 | 56 |
neural keel | 6.55e-11 | 56 |
brain grey matter | 1.04e-10 | 34 |
gray matter | 1.04e-10 | 34 |
cerebral cortex | 1.27e-10 | 25 |
pallium | 1.27e-10 | 25 |
regional part of forebrain | 3.07e-10 | 41 |
forebrain | 3.07e-10 | 41 |
anterior neural tube | 3.07e-10 | 41 |
future forebrain | 3.07e-10 | 41 |
regional part of telencephalon | 1.37e-09 | 32 |
central nervous system | 2.09e-08 | 81 |
neural plate | 2.39e-08 | 82 |
presumptive neural plate | 2.39e-08 | 82 |
brain | 3.30e-08 | 68 |
future brain | 3.30e-08 | 68 |
neurectoderm | 8.84e-08 | 86 |
nervous system | 3.42e-07 | 89 |
pre-chordal neural plate | 4.10e-07 | 61 |