FFCP PHASE1:Hg19::chr10:20506441..20506455,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:20506441..20506455,+ | |||
|id=chr10:20506441..20506455,+ | |||
|ontology_enrichment_celltype=CL:0002194!2.51e-26!63;CL:0000576!2.51e-26!63;CL:0000040!2.51e-26!63;CL:0000559!2.51e-26!63;CL:0000766!2.85e-26!76;CL:0002009!8.02e-26!65;CL:0002057!1.95e-25!42;CL:0000839!2.83e-24!70;CL:0000557!4.48e-24!71;CL:0000860!4.34e-22!45;CL:0000763!7.91e-16!112;CL:0000049!7.91e-16!112 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.03e-30;39!CL:0000234;1.03e-30;39!CL:0000860;2.25e-30;33!CL:0002057;2.25e-30;33!CL:0000576;1.95e-22;48!CL:0000766;1.34e-16;69!CL:0000763;6.12e-08;100!CL:0000235;9.86e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.47e-42,48;CL:0000234,2.47e-42,48;CL:0002194,3.13e-39,59;CL:0000576,3.13e-39,59;CL:0000040,3.13e-39,59;CL:0000559,3.13e-39,59;CL:0002009,7.47e-39,61;CL:0000766,3.09e-36,72;CL:0000860,5.73e-36,42;CL:0002057,5.73e-36,42;CL:0000557,1.40e-33,67;CL:0000839,5.61e-33,66;CL:0000763,1.03e-21,108;CL:0000049,1.03e-21,108;CL:0002087,5.90e-14,115;CL:0000738,4.38e-13,136;CL:0002031,2.11e-11,120;CL:0000037,3.84e-09,168;CL:0002032,7.69e-09,161;CL:0000837,7.69e-09,161;CL:0000988,3.40e-08,177;CL:0000235,1.02e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;7.67e-26;42!CL:0000049;2.26e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.55e-20!102;UBERON:0003061!4.55e-20!102;UBERON:0002371!4.81e-19!80;UBERON:0001474!4.80e-17!86;UBERON:0002193!1.36e-16!112;UBERON:0007023!2.83e-15!115;UBERON:0004765!5.85e-14!101;UBERON:0001434!5.85e-14!101;UBERON:0002405!6.41e-11!115;UBERON:0000922!8.50e-08!612;UBERON:0002204!4.03e-07!167;UBERON:0000468!4.21e-07!659;UBERON:0005743!4.47e-07!86;UBERON:0001017!6.60e-07!82;UBERON:0002346!8.12e-07!90;UBERON:0001049!8.72e-07!57;UBERON:0005068!8.72e-07!57;UBERON:0006241!8.72e-07!57;UBERON:0007135!8.72e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.34e-07;6!UBERON:0002358;1.34e-07;6!UBERON:0003684;1.34e-07;6!UBERON:0001178;1.34e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.78e-27,76;UBERON:0002390,2.84e-27,98;UBERON:0003061,2.84e-27,98;UBERON:0001474,6.84e-24,82;UBERON:0002193,1.01e-22,108;UBERON:0004765,6.70e-21,90;UBERON:0002405,6.91e-19,93;UBERON:0001434,9.83e-18,100;UBERON:0003081,1.39e-08,203;UBERON:0002204,3.23e-08,167;UBERON:0003688,1.47e-07,6;UBERON:0002358,1.47e-07,6;UBERON:0003684,1.47e-07,6;UBERON:0001178,1.47e-07,6;UBERON:0007023,8.16e-07,114 | |||
|phase1_expression=4.1786027232228,15.8434387679328,7.75249222527841,15.0109947529696,22.7950158157917,10.4680622892044,0,0.631719873426831,0,0,0,0,0,0,0,2.01697543935533,0,0,0,0,0.204000691244253,0.313454721478088,0,0,0.376627918784408,0,0,0,0.393364276848904,1.53531759238885,1.08371286321253,0,0,0.369754010166788,0,0,0,0.553995408531877,8.02177789880567,1.73608696572681,1.34349284543955,0.971680998056939,2.83333124397605,15.9938062657521,8.31327076115381,3.63876091781724,13.9457422143411,5.75635043230556,4.02618282163635,13.8092348314632,4.61089271752381,3.07426898855161,7.23965929546899,5.80936215225443,1.35426486594342,16.3770835402066,12.2807767526031,3.14612878223118,19.2832852193669,1.60464513538047,7.03270838378945,12.5343494070952,4.58766412529753,2.98357325372886,16.2517173632007,2.26954089876456,4.9825779919646,7.5374599577023,7.30076085788282,5.2125322729228,12.1079900526674,5.89244217580104,5.69632297393592,4.01385043992689,2.97646019951061,1.04829322754188,5.27944566388527,4.50530678524519,4.98249318760948,1.99508920618874,3.38158351238453,0.730656615058536,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24930726552346,0.236777252044017,0,0,0,0,0,0,0.383587685530591,2.1686349143074,0,2.17269778441236,0,1.94653948121054,0.661743720148475,1.99556457716308,1.40535657109002,1.0478326039817,0,0.370784442784429,2.27183175558278,1.21890816109487,5.31831842075461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.633152558322899,0.132409180813219,1.43418310374407,0.354668382198357,0.560677600142307,0,0.49333509683432,0,0.404132016209064,0.653847612453835,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0.741800787835671,0,0,0,0.125118519871964,0,0,1.22595118319608,0.300476117813194,0.453728732640084,0,0,0,0,0,0.257640540045629,0,0.506328996723799,0.389748020644795,0,0,0,0,0.201504196455281,0,0.193260853163297,0.545492241181669,0,1.21973706129595,1.72288698817931,2.67246068599892,1.14027160516907,2.52320850875628,0.36497735907583,0,0,0,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0.686271241194102,1.20725313949488,0,0,0.277765335475589,0,0,0,0.811512834825538,0.469634776943287,0,0,0.380508304469197,0,0.858486162094873,4.18568910348575,3.27605971194933,4.7561971932393,0,1.00789276919316,0.850650583454319,0.0895585227028483,0,0,0.492663237895943,0,0.829312462163088,0.432359860250884,0.25248486685276,0,0,0,0,0,0.300343057843917,0,0,0,0,1.03417372606222,0,0,3.45719551560332,1.04007436911366,0,0,0,2.85955987316295,0.542621605391443,0,0,1.42156779497018,0,0.904318131178758,2.61460037580088,10.7970830476622,10.9461402577071,18.0812552915566,37.9501091069457,1.19812427745791,0,0,1.30303176000821,0.205476322550383,0.179060963239896,0,0.394061520403854,0,0.128343036279748,0,0,0,0.167516265334349,2.55175500661265,9.73709131131337,26.9245313283622,5.38740167466846,0.858840442033979,0,0.271265023699736,0,3.03329280955175,2.99634588564476,0.35142424497814,0,6.82222512167955,3.10419213877515,0,0.184369168541703,0,0,0.343143423810856,1.03384013061444,3.45142721309787,1.921096040462,0,0,0.604780586659361,4.96215615637554,3.37616341233737,9.5424432107245,6.53509661204075,2.04682899626681,4.98647155545183,0,0,0.177561725313127,0,0,0,0,3.00759705454927,0.276242966807689,0.68888668898764,0,0,0,0.231046011313244,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0.328014645699706,2.60302715731442,2.06082023295445,0.366277859273374,0.247528499761764,1.14853107599234,0.650060246036521,0,0,0,0,0,0.429680979473094,0.290033387828457,0.255679882248303,0.534192213880424,0.330569830721956,1.34533047155574,0,0.4046311234222,0,0.62962469366128,0,0,0,0,0,0,0.372158369359667,0.316379424718726,4.95638504201945,0,0.42793898803392,0,0,0.719489830333259,3.0199073270966,1.17812402345686,0,0,0,0,0.487426979262569,0,0,0.565621727814851,0,0,0.66343897524122,0.438450885253763,0,0.655894752046633,0,0,0,0.286822704408103,0,0,0,0.422215270595328,0,0,0,0,0,0,1.60044461320525,0,0,0.443430153536676,0,2.02979043692868,2.29391162142713,10.8232965563091,1.42939065274673,0.822724546172388,1.94541993357815,5.40031437238115,0.79312517629427,0,0,0.245040215981032,0,0,0,0,0,0,0,0.973865820823666,1.12318871245384,0,0,5.01268954180134,2.70866844482565,0.481764225311099,1.00899853595524,0.425846237690326,0,0.614481528616916,0.447352215784832,1.00109485027145,0,0,0,0.811367035427949,0,0,0,4.54175355742871,0,0,0,0.23874448473769,1.48482340416319,0,1.9882952955326,1.82870241333667,0,0.329607748453519,0,4.38345574152353,0,0,0,0,0,0,0,0,1.38100767891707,4.7896618469388,0,0.969332746095218,1.57705766875147,0,0.7812832832557,0,3.62499787717397,0.455173793141999,0.254253650292766,0.709163045303809,0,0.583209226766509,0.520874984799877,3.54296554325536,0.844175070377856,0,0.442317039724898,0.295547618953547,0.658156191461918,0,1.39423744278603,1.15425387755696,3.41826167541004,0.461127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| |||
|short_description=p@chr10:20506441..20506455,+ | |||
}} |
Revision as of 02:04, 11 January 2014
Short description: | p@chr10:20506441..20506455, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr10:20506441..20506455, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.47e-42 | 48 |
phagocyte | 2.47e-42 | 48 |
monopoietic cell | 3.13e-39 | 59 |
monocyte | 3.13e-39 | 59 |
monoblast | 3.13e-39 | 59 |
promonocyte | 3.13e-39 | 59 |
macrophage dendritic cell progenitor | 7.47e-39 | 61 |
myeloid leukocyte | 3.09e-36 | 72 |
classical monocyte | 5.73e-36 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.73e-36 | 42 |
granulocyte monocyte progenitor cell | 1.40e-33 | 67 |
myeloid lineage restricted progenitor cell | 5.61e-33 | 66 |
myeloid cell | 1.03e-21 | 108 |
common myeloid progenitor | 1.03e-21 | 108 |
nongranular leukocyte | 5.90e-14 | 115 |
leukocyte | 4.38e-13 | 136 |
hematopoietic lineage restricted progenitor cell | 2.11e-11 | 120 |
hematopoietic stem cell | 3.84e-09 | 168 |
hematopoietic oligopotent progenitor cell | 7.69e-09 | 161 |
hematopoietic multipotent progenitor cell | 7.69e-09 | 161 |
hematopoietic cell | 3.40e-08 | 177 |
macrophage | 1.02e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.78e-27 | 76 |
hematopoietic system | 2.84e-27 | 98 |
blood island | 2.84e-27 | 98 |
bone element | 6.84e-24 | 82 |
hemolymphoid system | 1.01e-22 | 108 |
skeletal element | 6.70e-21 | 90 |
immune system | 6.91e-19 | 93 |
skeletal system | 9.83e-18 | 100 |
lateral plate mesoderm | 1.39e-08 | 203 |
musculoskeletal system | 3.23e-08 | 167 |
omentum | 1.47e-07 | 6 |
peritoneum | 1.47e-07 | 6 |
abdominal cavity | 1.47e-07 | 6 |
visceral peritoneum | 1.47e-07 | 6 |
adult organism | 8.16e-07 | 114 |