FFCP PHASE1:Hg19::chr10:75541796..75541836,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=118487 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23518 | |||
|TSSclassifier=strong | |||
|UniProt=Q96BP2,A6NJX6 | |||
|association_with_transcript=0bp_to_ENST00000372833,ENST00000372837,NM_203298,uc001jvb.2,uc001jvc.3_5end | |||
|description=CAGE_peak_1_at_CHCHD1_5end | |||
|id=chr10:75541796..75541836,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.08e-19!254;CL:0000548!1.18e-13!679;CL:0000004!1.18e-13!679;CL:0000255!1.18e-13!679;CL:0000012!4.20e-13!682;CL:0002321!7.39e-13!248;CL:0000220!1.63e-12!246;CL:0000222!1.22e-07!119;CL:1000449!4.81e-07!16;CL:1000497!6.16e-07!18;CL:0002518!6.16e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:1000449;1.63e-07;15!CL:1000497;2.32e-07;17!CL:0002518;2.32e-07;17!CL:0002681;3.96e-07;12!CL:0002584;3.96e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.52e-20,253;CL:0002321,4.01e-13,250;CL:0000222,7.21e-08,121;CL:1000449,1.60e-07,15;CL:1000497,2.33e-07,17;CL:0002518,2.33e-07,17;CL:0002681,4.06e-07,12;CL:0002584,4.06e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!2.61e-11!239;DOID:162!4.11e-11!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,2.61e-11,239;DOID:162,4.11e-11,235 | |||
|ontology_enrichment_uberon=UBERON:0003104!1.08e-09!238;UBERON:0009142!1.08e-09!238;UBERON:0005256!1.53e-08!143;UBERON:0002100!1.74e-08!216;UBERON:0000353!3.21e-07!17;UBERON:0004211!4.81e-07!16;UBERON:0001285!4.81e-07!16;UBERON:0007684!4.81e-07!16;UBERON:0003220!4.81e-07!16;UBERON:0004208!4.81e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0000353;7.81e-08;15!UBERON:0006555;1.63e-07;15!UBERON:0004819;1.63e-07;15!UBERON:0001285;1.63e-07;15!UBERON:0007684;1.63e-07;15!UBERON:0001225;3.96e-07;12!UBERON:0008987;3.96e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,6.47e-08,199;UBERON:0000353,8.27e-08,15;UBERON:0004211,1.60e-07,15;UBERON:0009773,1.60e-07,15;UBERON:0001231,1.60e-07,15;UBERON:0001285,1.60e-07,15;UBERON:0007684,1.60e-07,15;UBERON:0004208,1.60e-07,15;UBERON:0003104,2.49e-07,160;UBERON:0009142,2.49e-07,160;UBERON:0001225,4.06e-07,12;UBERON:0008987,4.06e-07,12;UBERON:0006555,9.10e-07,16;UBERON:0004819,9.10e-07,16 | |||
|phase1_expression=34.1555353028646,57.8071414505654,34.5338290035129,74.0542407813165,55.4231757089837,68.0424048798288,98.7869524856411,57.4865084818416,56.1549100629653,104.436923013141,249.812818134129,84.7552523865068,77.5474915991654,50.0016065958588,58.3259381281132,68.5771649380811,63.8856199705416,97.861552111908,87.3399709835007,81.25989833068,133.82445345623,85.8865936849961,50.9500057093281,74.0490639644303,72.563645685796,49.6687137361683,58.948223225061,57.9311350468679,19.2748495655963,14.5855171276941,14.7075317150272,88.264437549977,59.036360080537,44.7402352301813,55.0791796125945,49.3327236731353,67.23450060768,9.41792194504192,9.6261334785668,10.8505435357926,55.7549530857412,50.2035182329418,47.1363288770561,23.2637182047304,29.4743236077271,24.0158220575938,17.4321777679263,18.913722849004,21.3697395917621,16.1107739700404,15.1134816852169,19.8645073106412,10.6871161028352,11.6187243045089,10.8341189275473,20.7066573496865,23.7428350550326,29.8882234311963,17.7528657575123,12.1953030288916,14.0654167675789,19.4612267110163,16.3560199249738,25.5734850319616,11.6083695451434,17.5889419654253,13.7020894779026,10.3011952755265,10.9511412868242,18.4610517999349,7.87019353423379,12.8897172595648,19.6206680213348,44.3636101255078,30.1898105950362,54.5112478321777,27.9698291554773,28.0830789613617,31.6629405793248,44.4619880236348,36.7995852818317,42.1954195196304,49.2789484491704,44.2372275122326,46.2544812009048,42.2462920340842,40.0395987036012,44.8306903164497,44.2900064765858,54.3810640085158,14.7995371968457,13.5064553555316,11.8504700718821,14.5388461436928,10.0891541336676,61.631875837368,8.06510057466716,10.6112905942274,10.485676448975,39.4560129122,17.9257246648475,23.1989424810019,21.4309401248702,45.0098245816101,29.1659848400089,33.894685871294,26.2679747852065,68.5288560532362,63.8591396519002,72.0238022164101,72.6800546776781,38.833613488497,17.3495278899611,19.2629396224593,19.8617495229456,43.2841689104703,24.526111590523,31.9573524298846,21.7596935136772,36.316457232947,42.3204245006672,38.9685338223833,28.6092726247768,24.7014159528027,38.7285252312272,29.8339337575461,43.5197838368155,6.8546292696409,7.2208852861547,9.12393744461634,43.8852359365131,100.605128955545,52.4236503558474,58.9145818386843,27.5735850849739,42.1503370175997,31.811437882044,42.3372337163293,62.1093748767926,78.2704773042851,58.2344629145426,28.8153966094968,107.4671100463,116.055530591526,61.9885521880445,57.985202520656,71.930256640706,14.5479280826259,21.7358066096449,26.0020250930695,41.3425807322747,67.9585330133838,59.7081662765062,42.3980956443007,53.695927834868,48.1456573395118,49.9497970022977,50.6496847971885,40.9131202089717,29.455413923291,47.1310301017702,57.780680034607,53.6936526605973,63.9733759801812,76.1533431008854,55.2765318078454,83.0758678716828,83.4451070381418,56.7271558623768,33.2242980848845,67.7846452542507,9.22462922052443,0,101.173820097068,55.1638866381804,49.6391605725153,16.2863292400259,18.3575437279241,59.584288209324,53.2643720135192,45.9020681637731,69.5602486536391,30.8098925045769,54.5578221882237,84.0194182003178,48.4343768463781,53.5843609766399,32.8050004567315,79.6008195917317,50.2015202959115,67.4013549288623,71.2827406767653,85.6307875707416,94.6638437173155,48.3845385874097,89.1777143683435,31.1010601339054,26.1360628602052,54.6459913705611,69.17226350729,87.6714133015811,65.6510844420858,66.6881710917569,36.5724632439121,59.2619788189131,72.6376076043677,44.6207034952592,78.0413420140945,13.6336123123535,35.8776413215193,38.9954698133594,18.6056479572329,41.324064224614,15.7160729427834,39.456773542297,15.0210935694727,34.3952628219031,24.4860761016791,41.7906539836039,38.1484694092396,18.4604988108639,44.7339316130723,54.598510723977,63.0030381312348,52.0945090328494,58.2213328639678,64.524090542556,70.1082474420657,67.5086808071902,61.0563614040532,104.46083226251,125.917188881161,29.725411142665,39.8809381679589,55.2539685409922,45.9724248751659,73.6317071302977,82.1049192276517,81.5949899978012,79.5336398615491,82.0587157129011,71.4644576623092,85.1801522608837,91.1459643162711,90.2618739576592,98.8800193352223,112.937784557571,119.205507732929,86.0189683682626,102.906097969879,76.0530208930985,60.9352874340128,61.442150294866,50.3267933332702,50.4252598026766,62.6222507589618,40.6076056011915,31.4724909121335,69.8676358260834,49.5348181598133,24.109814592964,141.431130798023,106.805193098702,56.8058984377876,33.4614778572092,52.4050205372698,74.5406675248343,63.1643785418866,44.2514462857194,71.2543514538744,62.0466855340241,52.18295112605,71.4915890608783,91.8591573070414,68.8726725615324,77.6927532888278,29.8229880600485,35.4573404987034,36.4213545206951,20.6918559916296,34.6910830012111,13.2689993946094,15.7090749224488,13.634182810049,44.1945344273497,30.1770856191039,33.9930596909136,39.3466625852222,67.1463527352703,69.078903304101,63.7392944766189,57.2989841004793,87.192013766656,46.7898263537661,43.1767530630978,57.2250313363012,89.60209177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| |||
|short_description=p1@CHCHD1 | |||
}} |
Revision as of 03:32, 11 January 2014
Short description: | p1@CHCHD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CHCHD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000372833, ENST00000372837, NM_203298, uc001jvb.2, uc001jvc.3_5end |
EntrezGene: | CHCHD1 |
HGNC: | 23518 |
UniProt: | Q96BP2A6NJX6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.52e-20 | 253 |
embryonic cell | 4.01e-13 | 250 |
mesodermal cell | 7.21e-08 | 121 |
epithelial cell of nephron | 1.60e-07 | 15 |
kidney cell | 2.33e-07 | 17 |
kidney epithelial cell | 2.33e-07 | 17 |
kidney cortical cell | 4.06e-07 | 12 |
renal cortical epithelial cell | 4.06e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
trunk | 6.47e-08 | 199 |
parenchyma | 8.27e-08 | 15 |
nephron epithelium | 1.60e-07 | 15 |
renal tubule | 1.60e-07 | 15 |
nephron tubule | 1.60e-07 | 15 |
nephron | 1.60e-07 | 15 |
uriniferous tubule | 1.60e-07 | 15 |
nephrogenic mesenchyme | 1.60e-07 | 15 |
mesenchyme | 2.49e-07 | 160 |
entire embryonic mesenchyme | 2.49e-07 | 160 |
cortex of kidney | 4.06e-07 | 12 |
renal parenchyma | 4.06e-07 | 12 |
excretory tube | 9.10e-07 | 16 |
kidney epithelium | 9.10e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 2.61e-11 | 239 |
cancer | 4.11e-11 | 235 |