FFCP PHASE1:Hg19::chr10:88516017..88516034,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:88516017..88516034,- | |||
|id=chr10:88516017..88516034,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000540;1.15e-10;6!CL:0000404;1.15e-10;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.36e-10,6;CL:0000031,1.36e-10,6;CL:0000404,1.36e-10,6;CL:0000047,5.99e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0006241;3.38e-12;3!UBERON:0003057;3.38e-12;3!CL:0000031;1.15e-10;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.83e-14!82;UBERON:0000073!1.87e-13!94;UBERON:0001016!1.87e-13!94;UBERON:0005743!2.43e-13!86;UBERON:0001049!1.91e-10!57;UBERON:0005068!1.91e-10!57;UBERON:0006241!1.91e-10!57;UBERON:0007135!1.91e-10!57;UBERON:0002346!2.65e-09!90;UBERON:0000955!7.15e-09!69;UBERON:0006238!7.15e-09!69;UBERON:0002020!1.85e-08!34;UBERON:0003528!1.85e-08!34;UBERON:0003075!4.61e-08!86;UBERON:0007284!4.61e-08!86;UBERON:0001893!7.20e-08!34;UBERON:0002616!7.48e-08!59;UBERON:0002791!9.59e-08!33;UBERON:0001869!1.80e-07!32;UBERON:0001950!8.14e-07!20;UBERON:0002780!8.85e-07!41;UBERON:0001890!8.85e-07!41;UBERON:0006240!8.85e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0002240;3.38e-12;3!UBERON:0005174;3.38e-12;3!UBERON:0001137;3.38e-12;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,1.90e-12,3;UBERON:0005174,1.90e-12,3;UBERON:0001137,1.90e-12,3;UBERON:0001017,2.57e-09,81;UBERON:0001016,3.23e-09,89;UBERON:0001049,3.33e-07,56;UBERON:0005068,3.33e-07,56;UBERON:0006241,3.33e-07,56;UBERON:0007135,3.33e-07,56 | |||
|phase1_expression=0.181678379270557,0,0.704772020479856,1.0007329835313,0.446961094427288,0,0,0,0,0.491467873003018,0.697801167972428,0.218441372130172,0.263766978228454,0.123766352960047,0,0,0,0,0.487932798790507,0.246242116153576,1.22400414746552,0.313454721478088,0,0.684372125364421,0.376627918784408,0,0,0,0,0,0,0.919421224478927,0.6024118375565,0,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0.270803863765016,0,0,0,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.80642697289893,0.267440195783507,0.434473211648397,0,0,0.12786256184353,0.361439152384566,0.50133791063589,0,0,0.486634870302636,0.189069634328136,0.886917589850256,0.175669571386252,0.261958150995425,0.728590576585084,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.662045904066094,0.286836620748814,0,0,0,0,0,0.134710672069688,0.817309515567294,0.151357427644931,0,0.468642863667593,0,0,0,0.23486899728753,0.323745888736263,0.280901613404497,0,0.245668634623536,0.309977343527296,0,0,0,0,0.168336113954066,0.375355559615893,0,0.877955241761676,0,0,0.340296549480063,1.25572744982203,0.213557388818567,0.211931901159562,0.300091096084402,0.103052529238439,0,0,0.675105328965065,0.389748020644795,1.00973509697646,0,0,0,0.302256294682921,0,0,0.272746120590835,0,0.487894824518382,1.19276791489337,1.04574548582567,0.829288440122964,0.756962552626885,0.36497735907583,0,0,0,0,0,0.236613600079688,0.168584690078102,0.482022059766964,0.220587945464788,0,0.237270619111097,0.404493924480493,0.196221465125346,0,0,1.40241773803446,0.8231480226628,0,0,0,0,0.441463099414651,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0.93733833986777,0,0.141775097242386,0,0,0,0,1.14462964217194,0.829312462163088,0.864719720501769,0.75745460055828,0.190493682876507,0,2.34434894420094,0,0.205654985406647,0,0,0.336393253036082,0.43596006883328,0.1466765716419,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0.142977993658148,0,0,0.325736184293735,0,0.791951872933429,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0.289562613335158,0.410952645100767,0.716243852959582,0,0,0.215627574859517,0.256686072559497,0.508189248444927,0,1.54657762555539,1.00509759200609,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0.356857977594324,0,0.117141414992713,0,0,0,0.664225598535437,0.921845842708516,0,0,0.343143423810856,0,0,0.106727557803444,1.21251028578504,1.66435439510497,0.604780586659361,0.992431231275107,0.767309866440312,0.841980283299221,0.128139149255701,0,0.160853921143607,0,0.616838775210622,0,0.0821271560138091,0,0.116210378459959,1.20859449591622,0,0.184161977871793,0.114814448164607,0.182091168006717,0.131124414959424,0,0.0770153371044148,0.784349769176855,0,0,0,0,0.215915916102139,0,0.270946437543853,0.501689773854853,0.254876273045038,0,0.447749509444357,0.219259876645935,0.261435451024901,0,0.328014645699706,0,0,0.0915694648183434,0.577566499444116,0,0,0,0.096670718292122,0.770243085573222,0.15350367472613,0.137836572484531,0.644521469209642,0.290033387828457,0.170453254832202,0.356128142586949,0,0,0.127612712494584,0,0,0,0,0.308033580176089,0,0,0.18532421910392,0,0,0.316379424718726,0,0,0,0.636406495851874,1.56989728039846,0.359744915166629,0.823611089208164,0.353437207037059,0,0,0.842516912477962,0,0,1.05650146756755,0,0.141405431953713,0,1.10273068709225,0.66343897524122,0.438450885253763,0,0,0.202910376962704,0.30982349809975,0,0,0,0,0.709522128141196,0.211107635297664,0,0,0.349934720244983,0.0962221127255121,0,0,0,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0.854592569019785,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,5.01268954180134,0,0.481764225311099,0,0.425846237690326,0.687010689511529,0.307240764308458,0,0.166849141711909,0,0,0,0.540911356951966,0,0,0,0.146508179271894,0.606802608747567,0.222886768554957,0.568272293612826,0.23874448473769,0,0.307160702099232,0.994147647766298,0.562677665642051,0.222617410045812,0,2.53350489753592,0.996239941255349,0.552567831062295,0.503865495708552,0.306806047506464,0,0.311039587661807,0.0898683511473268,0,0,0.197286811273867,0,0,0,0.463840490809256,0,0,0,0,0,0,0,0.344743373241465,1.16641845353302,1.38899995946634,1.77148277162768,0.482385754501632,1.52581736317083,0.442317039724898,0,0.438770794307945,0.10893846351899,0,0.153900517007594,0,0,0.0897576444097721,0.108647371922008,0.31900115973192,0.0915975934018623,0,0,0.31396051279005,0,1.35357396370308,1.17637520590644,0.839107934879214,0.189753732724185,0,0,0,0.141353071433941,0.649165919226273,0,0,0,0,0,0,0.202203398942031,0,0,0,0,0.242780379534093,0.394584402849391,2.41981432097328,0.61214552326098,0.505492637027904,4.50970258243478,1.34794648816421,0,0.330991955875499,0,0,0,0,0,0.0979923974143777,0,0,0,0.387025325156341,0.730893170861856,0.574808199372465,0.193978032976839,0,0.225980740780532,0.411125773940253,0.397429223405979,0.189932387867636,0.391102765469606,0,0.426905989478705,0.19980960958213,0.144090417154106,0.572682980829578,0.171594997861965,0.288109595976299,0.248505071130865,0.235694034616795,0,0.313808538937,0.509991088181609,1.15580235960608,1.80126086612937,0.273810757783986,0,0,0,0,0.229160424011684,0,0,0,0,0.268733889946905,0,3.49487848582361,0.0787831823072236,0.576911008668165,0.404421263125109,1.27955725969173,0.254019996197353,0,0,2.57205037544031,0.825236619583403,2.9080823662043,0,0,0.364497339948148,0.335434687599266,0,0.262272940674991,0,0.179287339332845,0.383830394638891,0,0,0.76280561296425,0,0,0,0,0.164185041498678,0,0.453248366080503,0,0,0.904980694530854,0.39669780522807,0,0,0.213574825135389,0,0,0,0.197611631897944,1.82688897571344,0,0.544017803369474,0.2506898940227,0,0.327872630709804,0.314108192500469,0,1.09823638411767,0.3755727921195,0,0.887432412294818,0.993542447062135,0.415045904808692,0.249960815924213,0.303298235083296,0,0.235265819698172,0,0.579684114443301,0.74627401443437,0.701139929541673,0,0.568209015825267,0,0,0.457680136793847,0,0.621748802331122,0.591420599958536,0,0.449803112163605,0,0,0,0,0.150257608997218,0,0.406870733204662,0.181848659202559,0.322231671127465,0,0,0.400027764663154,0,0,0,0,0.214441591374926,0.260994291965212,0,0,0,0,0.926404341482917,1.09642024789354,0,0.771656153083659,0.337884881306145,0.76872455576384,0.345430341731199,1.51929978088691,0.691292180758654,0,0,0,0.327609848846413,0,0.422624246717254,0,0.106691729694141,0,0,0.368211900503681,0,0,0.383683113910955,0.970423302570136,0.314531883711793,1.96577348745625,0.509197589862076,0.425149840203366,0.743614585554013,0,0,0.630893960010027,1.60114149657094,0,0.6124909547064,0.192687675289379,2.8339315265117,1.27707087245721,0.82046545696302,0.504143392443436,0.829887029570615,0.161475645631851,0,0.0981477185010256,0.11796972334774,0.183428598521679,0.231051332300676,0.762764190934334,0,0.198916222116275,0.300841313397029,0,0,0,0,0.147856086217045,0.270150338473579,0,0.413373593002368,0.380494861163441,0,0,0,0.879356221798103,0,0,1.68141861109412,0,0.227662191351298,0,0.345701962667338,0.342976018874837,0.40781839786099,0.657727735628491,0.118193840883968,0,0.156986185701028,0.157115589916002,0,0.913158720509496,0,0,0.428859265059938,0.94808167039636,0.464965701472501,0.347716544605159,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,1.14553434272025,1.5510319283216,0,0.111855431797792,0,0,0.647428837187895,0.307988420568741,0,0,0.467878926924211,1.39265542612958,0,0.67767649223376,0.659643100472575,0,0.0771741581079447,0,0,0.490296643507811,0.235676547101626,1.37415926980462,2.0793248022896,1.6906229103336,0.339854229375634,0,0,0.0999411559249289,0,0,0.0802413666891683,1.46067277649303,0.458729283404541,0.573358332605805,0.473314686579554,0.475940431336403,0,0,0,0.462175628631418,0.432626562123789,0.504665699340316,0.327796715891087,2.02717601618299,0.101988829741982,0.534434810531121,0.735159196278759,0.250707539292375,0.227336094654718,0,0,0.310298987585686,0.213233981900981,0.23806443146374,0,0,0.33639558774184,0.509177266225319,1.0105859447911,0.217716747896961,0,0.0673520530145875,0.0717222053926763,0,0.325613074443898,0.320182037633146,0,0.0898252021065869,0,0.366724332548599,0,1.99727032255654,0.402547587182052,0 | |||
|short_description=p@chr10:88516017..88516034,- | |||
}} |
Revision as of 03:56, 11 January 2014
Short description: | p@chr10:88516017..88516034, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:88516017..88516034, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.36e-10 | 6 |
neuroblast | 1.36e-10 | 6 |
electrically signaling cell | 1.36e-10 | 6 |
neuronal stem cell | 5.99e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 1.90e-12 | 3 |
dorsal region element | 1.90e-12 | 3 |
dorsum | 1.90e-12 | 3 |
central nervous system | 2.57e-09 | 81 |
nervous system | 3.23e-09 | 89 |
neural tube | 3.33e-07 | 56 |
neural rod | 3.33e-07 | 56 |
future spinal cord | 3.33e-07 | 56 |
neural keel | 3.33e-07 | 56 |