FFCP PHASE1:Hg19::chr10:96162180..96162235,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23232 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29082 | |||
|TSSclassifier=strong | |||
|UniProt=O60347 | |||
|association_with_transcript=0bp_to_NM_015188,uc001kjr.2_5end | |||
|coexpression_cluster_id=C2081 | |||
|description=CAGE_peak_3_at_TBC1D12_5end | |||
|id=chr10:96162180..96162235,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.38e-13!42;CL:0002009!1.02e-12!65;CL:0000557!5.08e-12!71;CL:0002194!1.12e-11!63;CL:0000576!1.12e-11!63;CL:0000040!1.12e-11!63;CL:0000559!1.12e-11!63;CL:0000860!1.61e-11!45;CL:0000839!6.01e-10!70;CL:0000766!2.01e-08!76 | |||
|ontology_enrichment_celltype_v019=CL:0000576;2.25e-10;48!CL:0000860;4.48e-09;33!CL:0002057;4.48e-09;33!CL:0000473;5.94e-09;39!CL:0000234;5.94e-09;39!CL:0000766;6.05e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.06e-16,48;CL:0000234,1.06e-16,48;CL:0002009,1.52e-15,61;CL:0000557,5.25e-15,67;CL:0000860,5.70e-15,42;CL:0002057,5.70e-15,42;CL:0002194,2.56e-14,59;CL:0000576,2.56e-14,59;CL:0000040,2.56e-14,59;CL:0000559,2.56e-14,59;CL:0000839,2.08e-12,66;CL:0000766,1.39e-11,72;CL:0000763,5.77e-07,108;CL:0000049,5.77e-07,108;CL:0002393,7.97e-07,9;CL:0002397,7.97e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.70e-10;42!UBERON:0006601;1.51e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.72e-33!115;UBERON:0001049!7.06e-27!57;UBERON:0005068!7.06e-27!57;UBERON:0006241!7.06e-27!57;UBERON:0007135!7.06e-27!57;UBERON:0002616!4.43e-23!59;UBERON:0003080!2.16e-22!42;UBERON:0002780!5.08e-22!41;UBERON:0001890!5.08e-22!41;UBERON:0006240!5.08e-22!41;UBERON:0003075!8.81e-21!86;UBERON:0007284!8.81e-21!86;UBERON:0000073!9.53e-21!94;UBERON:0001016!9.53e-21!94;UBERON:0001017!1.10e-20!82;UBERON:0005743!1.10e-20!86;UBERON:0000955!4.30e-20!69;UBERON:0006238!4.30e-20!69;UBERON:0002346!1.36e-19!90;UBERON:0000062!1.56e-18!511;UBERON:0001893!1.69e-18!34;UBERON:0002020!1.79e-18!34;UBERON:0003528!1.79e-18!34;UBERON:0002791!7.05e-18!33;UBERON:0001869!3.58e-17!32;UBERON:0003056!1.38e-16!61;UBERON:0000480!5.04e-15!626;UBERON:0000467!5.93e-15!625;UBERON:0000468!4.19e-14!659;UBERON:0002619!1.93e-13!22;UBERON:0000956!8.83e-13!25;UBERON:0000203!8.83e-13!25;UBERON:0001950!2.57e-12!20;UBERON:0000033!4.60e-12!123;UBERON:0002050!1.24e-11!605;UBERON:0005423!1.24e-11!605;UBERON:0000923!1.99e-11!604;UBERON:0005291!1.99e-11!604;UBERON:0006598!1.99e-11!604;UBERON:0002532!1.99e-11!604;UBERON:0000153!5.88e-11!129;UBERON:0007811!5.88e-11!129;UBERON:0000922!7.65e-11!612;UBERON:0004121!1.47e-10!169;UBERON:0000924!3.61e-10!173;UBERON:0006601!3.61e-10!173;UBERON:0002371!2.70e-09!80;UBERON:0001474!7.59e-08!86;UBERON:0002308!2.66e-07!9;UBERON:0000125!2.66e-07!9;UBERON:0002390!3.21e-07!102;UBERON:0003061!3.21e-07!102;UBERON:0004111!3.65e-07!241;UBERON:0002193!4.62e-07!112;UBERON:0002420!6.63e-07!9;UBERON:0007245!6.63e-07!9;UBERON:0010009!6.63e-07!9;UBERON:0010011!6.63e-07!9;UBERON:0000454!6.63e-07!9;UBERON:0002405!7.92e-07!115;UBERON:0004765!8.33e-07!101;UBERON:0001434!8.33e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.12e-17;41!UBERON:0001890;2.12e-17;41!UBERON:0001893;5.30e-17;34!UBERON:0003528;5.99e-17;34!UBERON:0002020;5.99e-17;34!UBERON:0002791;1.06e-16;32!UBERON:0001869;1.15e-16;32!UBERON:0000073;1.31e-15;53!UBERON:0002616;1.31e-15;53!UBERON:0002619;3.83e-15;22!UBERON:0001950;7.59e-14;20!UBERON:0000956;1.60e-13;25!UBERON:0000203;1.60e-13;25!UBERON:0001016;3.17e-10;83!UBERON:0000955;3.51e-10;68!UBERON:0007023;5.74e-10;114!UBERON:0001017;6.98e-10;75!UBERON:0000125;4.62e-08;9!UBERON:0002308;4.62e-08;9!UBERON:0002420;1.95e-07;9!UBERON:0007245;1.95e-07;9!UBERON:0010009;1.95e-07;9!UBERON:0010011;1.95e-07;9!UBERON:0000454;1.95e-07;9 | |||
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| |||
|short_description=p3@TBC1D12 | |||
}} |
Revision as of 04:15, 11 January 2014
Short description: | p3@TBC1D12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TBC1D12_5end |
Coexpression cluster: | C2081_corpus_medulla_substantia_pons_optic_thalamus_globus |
Association with transcript: | 0bp_to_NM_015188, uc001kjr.2_5end |
EntrezGene: | TBC1D12 |
HGNC: | 29082 |
UniProt: | O60347 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.06e-16 | 48 |
phagocyte | 1.06e-16 | 48 |
macrophage dendritic cell progenitor | 1.52e-15 | 61 |
granulocyte monocyte progenitor cell | 5.25e-15 | 67 |
classical monocyte | 5.70e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.70e-15 | 42 |
monopoietic cell | 2.56e-14 | 59 |
monocyte | 2.56e-14 | 59 |
monoblast | 2.56e-14 | 59 |
promonocyte | 2.56e-14 | 59 |
myeloid lineage restricted progenitor cell | 2.08e-12 | 66 |
myeloid leukocyte | 1.39e-11 | 72 |
myeloid cell | 5.77e-07 | 108 |
common myeloid progenitor | 5.77e-07 | 108 |
intermediate monocyte | 7.97e-07 | 9 |
CD14-positive, CD16-positive monocyte | 7.97e-07 | 9 |