FFCP PHASE1:Hg19::chr10:104952377..104952445,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_at_chr10:104952377..104952445,+ | |||
|id=chr10:104952377..104952445,+ | |||
|ontology_enrichment_celltype=CL:0000037!6.48e-36!172;CL:0000566!6.48e-36!172;CL:0002032!9.13e-34!165;CL:0000837!9.13e-34!165;CL:0000988!6.20e-33!182;CL:0000738!5.63e-32!140;CL:0000766!5.00e-28!76;CL:0000763!5.06e-28!112;CL:0000049!5.06e-28!112;CL:0002057!8.14e-27!42;CL:0002087!1.45e-26!119;CL:0002031!2.09e-26!124;CL:0000860!1.63e-25!45;CL:0000557!2.28e-24!71;CL:0002009!8.39e-22!65;CL:0000839!3.11e-21!70;CL:0002194!4.70e-21!63;CL:0000576!4.70e-21!63;CL:0000040!4.70e-21!63;CL:0000559!4.70e-21!63;CL:0000134!6.00e-08!358;CL:0002320!1.54e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.42e-22;33!CL:0002057;3.42e-22;33!CL:0000576;9.29e-20;48!CL:0000473;4.88e-17;39!CL:0000234;4.88e-17;39!CL:0000766;1.77e-16;69!CL:0000763;3.68e-12;100!CL:0002087;2.88e-10;104!CL:0000738;5.39e-09;136!CL:0000988;2.12e-07;177!CL:0000094;3.60e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.39e-42,168;CL:0002032,6.89e-40,161;CL:0000837,6.89e-40,161;CL:0000988,6.11e-38,177;CL:0000738,1.36e-37,136;CL:0000763,4.96e-34,108;CL:0000049,4.96e-34,108;CL:0000766,7.82e-34,72;CL:0002031,3.10e-31,120;CL:0002087,4.07e-31,115;CL:0000860,1.27e-29,42;CL:0002057,1.27e-29,42;CL:0000557,1.30e-29,67;CL:0002009,1.03e-26,61;CL:0000473,1.94e-26,48;CL:0000234,1.94e-26,48;CL:0000839,2.68e-26,66;CL:0002194,7.06e-26,59;CL:0000576,7.06e-26,59;CL:0000040,7.06e-26,59;CL:0000559,7.06e-26,59;CL:0000134,2.59e-09,354;CL:0002320,9.70e-09,361;CL:0002393,3.26e-07,9;CL:0002397,3.26e-07,9;CL:0000094,4.44e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;6.05e-22;42!CL:0000049;3.14e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.08e-28!112;UBERON:0002390!1.13e-26!102;UBERON:0003061!1.13e-26!102;UBERON:0002371!5.63e-21!80;UBERON:0002405!6.96e-20!115;UBERON:0001474!2.18e-19!86;UBERON:0004765!2.08e-14!101;UBERON:0001434!2.08e-14!101;UBERON:0003081!6.04e-13!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.52e-33,108;UBERON:0002390,4.86e-32,98;UBERON:0003061,4.86e-32,98;UBERON:0002405,4.79e-28,93;UBERON:0002371,1.36e-26,76;UBERON:0001474,2.17e-24,82;UBERON:0004765,2.26e-20,90;UBERON:0001434,5.34e-16,100;UBERON:0003081,4.17e-15,203;UBERON:0002384,1.44e-07,371 | |||
|phase1_expression=0.726713517082227,1.71280419112787,0.845726424575827,1.0007329835313,0.446961094427288,0,0,0,0.783556884599516,0.737201809504527,3.48900583986214,1.74753097704138,1.05506791291381,1.11389717664042,0.662794751455832,3.36162573225888,0.602694528023977,0,0.487932798790507,0.861847406537515,1.02000345622126,0.626909442956176,0.286235987131057,0.273748850145768,0.627713197974014,2.06316195519468,1.23150884174919,2.04648031415566,14.9478425202584,4.60595277716655,5.72819656269481,0,0,0.369754010166788,3.64095842727418,3.9807385096478,9.39521405871511,13.8498852132969,17.4473669299023,11.0675544065084,2.01523926815932,3.56283032620878,1.03030227053675,12.5042485350426,12.0920301980419,16.2531320995837,13.248455103624,9.04569353648017,15.4853185447552,15.8230815777183,14.8573209786878,16.3172738623124,19.9952494827239,18.0735711403471,21.6682378550947,13.7416907866101,14.4640259530658,9.21366286224847,9.48860066349798,14.4418062184242,8.95071976118658,15.5030111087757,17.1538745554603,14.4916415181116,14.2202526928006,9.07816359505824,18.0618452208717,20.8536392163097,16.1659704710262,13.6828972164223,4.23779651843358,10.3117738076518,8.54448446090388,9.29523259772544,8.50417199860174,8.17668717482666,10.89587722121,8.71025978480737,10.2864375486131,7.98035682475496,10.94041724595,6.75857368929146,3.51992488922645,5.46138611262132,4.44754626931777,2.98711155796555,5.20514783146816,4.59801951963587,4.62731410949403,4.77026877267682,3.98449078376614,6.45960908308033,2.6759125968766,2.64342657158052,5.04457706683382,4.21414535640123,1.7703879310245,1.17903228824749,2.05601498999509,3.17654341242288,1.95553359980154,1.89379122293893,7.79306913631645,2.22820913770347,2.3568472597987,1.55073726208535,2.70803863765016,1.5370958367081,2.21100890851793,1.15106533222573,1.10540007114339,3.18783394308558,3.11401782640327,2.1403266247177,3.1360657141493,1.47302145506836,3.44898444241729,3.09264700934367,3.28925599625354,4.14135038621326,1.95325036156926,0.950452044448374,2.71035214339991,1.79181255616186,0,2.8413270245282,4.10563998460523,1.00803371612366,2.94184215361858,2.31719046212478,2.43806866313962,2.68280343881454,1.53435074212236,0.722878304769133,0.50133791063589,0.434539556882471,0.795285947051099,0.973269740605272,1.98523116044542,0.221729397462564,0.87834785693126,1.37528029272598,0.364295288292542,0.741568885568859,0.324547393654683,1.56716763569341,0.531831842075461,3.33886874027479,1.71598473234038,4.45749001595478,2.58391129576717,1.72046919021225,2.77712401286075,2.26123176769604,0.838998872419812,1.37559020970034,1.46296476575767,1.03366703667732,1.06729878806013,3.01248551488203,1.20848795132744,0.760272105718513,4.39311703586705,4.41195696415042,0.81014194788176,2.67899184852239,3.59246996201872,2.0270066486998,0,0,0.732806975721629,19.7670626154095,23.2668158488995,0.872188104285069,0.496971951695318,1.39293562831038,0.794455084879313,1.14734648299525,1.41867352879343,1.68203280042692,3.20246987189115,1.2333377420858,0.622422070799533,1.0776853765575,1.14423332179421,1.36221684880438,1.15235184896,0.70296429550139,0.312160076830321,0.570471821544449,1.19558944441441,0.469737994575059,0.485618833104395,0.98315564691574,0.204154171254893,0.491337269247072,0.413303124703062,0,1.97813543422845,0.910161361938026,1.43723628363248,0.168336113954066,0.750711119231785,0.554128230968366,0.438977620880838,0.919463387397059,0.901428353439581,1.81491493056034,1.61450672119976,0.85422955527427,1.27159140695737,0.900273288253207,1.13357782162283,1.03056216018252,0.744467425326359,1.35021065793013,1.07180705677318,2.01947019395292,0.460249493211497,1.45481451136931,1.42003837006646,1.20902517873168,1.52604533079439,0.193260853163297,0.272746120590835,0.860413786167011,0.243947412259191,0.530119073285941,0.464775771478074,0.414644220061482,0.252320850875628,0.36497735907583,0,1.28648187638577,0,1.39310378409594,1.44375896333917,0.236613600079688,0.505754070234305,0.241011029883482,0.661763836394364,0.871517776369625,1.42362371466658,0.808987848960987,0.98110732562673,0.38474715694639,2.95262181849859,1.40241773803446,1.2347220339942,0,0,1.96565443335525,1.77236972004421,0.441463099414651,0.614942192715568,0.686271241194102,0.439001141634502,1.1240175325762,0.502644862058154,0.277765335475589,0.325808305310325,0,2.88662684050547,0.34779121492523,1.17408694235822,4.04226053731007,2.77791307545966,3.99533719692656,3.1608175918371,1.71697232418975,2.21595305478658,1.17002132569619,2.52672975890838,0.93733833986777,0.671928512795438,0.425325291727159,0.268675568108545,0.290633938513962,1.53353071666084,1.47798971368783,5.54705134283324,8.9151089682532,6.91775776401415,5.6809095041871,0.888970520090367,0,1.17217447210047,5.13217338068116,0.616964956219941,0.300343057843917,0,1.56983518083505,0.43596006883328,1.466765716419,0.904902010304444,3.57656445851882,0,1.86156681609409,0,1.28603687131071,5.67396528093113,1.0656887160644,0.857867961948885,1.08524321078289,1.64648067356154,1.30294473717494,0,0.791951872933429,0.602878754119172,0,0.799783929456456,0,1.00451418286425,0,0.479249710983165,0,1.42636905040718,0.289562613335158,1.02738161275192,0.537182889719687,1.2329365839288,2.95546140302891,3.01878604803324,4.2353201972317,2.03275699377971,1.30139853857622,0.773288812777695,0.502548796003046,0,31.4582950057817,35.899375104483,31.9099945345747,0.981531933753119,2.00068208423871,0,1.87173775377726,1.24900292158013,0.946214490203608,1.17141414992713,0.300946099727719,0,1.03473071292505,0.664225598535437,1.29058417979192,0.781952530212746,0.587403472388222,1.02943027143257,4.13536052245775,8.41285383192606,5.33637789017222,2.42502057157008,0,0.604780586659361,0.744323423456331,1.38115775959256,1.40330047216537,0.768834895534206,0,0.965123526861645,0,0.771048469013278,1.06537035187876,0.492762936082855,0,0.697262270759755,0.362578348774867,0.601519410909855,1.10497186723076,0.918515585316854,2.00300284807389,1.31124414959424,0.902399225814824,1.15523005656622,0,1.46139224653261,1.58327443339314,3.4120015221269,1.70093705276516,2.37507507712353,1.54227252690289,0.812839312631559,2.00675909541941,1.52925763827023,0.831076008928724,1.34324852833307,0.219259876645935,0.261435451024901,1.02580050046556,1.64007322849853,0.650756789328606,2.47298427954533,1.55668090191184,1.81520899825294,2.29706215198469,1.30012049207304,0,0.96670718292122,0.770243085573222,0.767518373630648,0.413509717453592,0.859361958946189,1.0151168573996,0.852266274161009,1.06838442776085,1.15699440752685,2.30628080838127,0.893288987462089,0.910420027699949,1.85938219718914,0.94443704049192,0.6970372701606,0.616067160352178,1.59691809095107,0,0.18532421910392,1.00187420719394,1.48863347743867,0.949138274156178,1.5250415513906,1.02359116524534,2.1396949401696,0.636406495851874,0,0.359744915166629,0.823611089208164,0.471249609382746,0.404364963146632,0,1.26377536871694,0,0.731140468893853,0,1.36499911407986,1.83827061539827,0,0.551365343546124,0.66343897524122,0.876901770507525,2.31510213706675,0,0,0.92947049429925,0.563391205064483,0.717056761020258,0.982490410131212,0.35667105148125,0,0.844430541190656,1.64647446479951,0.75894634753143,0.349934720244983,0.0962221127255121,1.34060455107157,1.08890984861323,2.63602642174982,1.29151611801369,0,0.443430153536676,0.459446800413919,13.7010854492686,12.9988325214204,20.5072987382699,7.62341681464925,11.1067813733272,9.07862635669804,9.72056587028607,23.0006301125338,0.747768497892312,3.84991942105343,0.490080431962063,1.48642540100575,1.87549976869378,0.853702120180969,0.318852545457645,2.19537308576098,7.08569869489757,14.1821300425002,2.59697552219644,7.86232098717685,1.36940807419915,2.0368386450493,7.51903431270201,2.70866844482565,2.56940920165919,3.8341944366299,3.83261613921294,3.09154810280188,3.37964840739304,2.68411329470899,2.66958626739054,3.51698571723673,1.11362469558097,0,1.08182271390393,2.99764771198038,1.4098700508785,0.935702702041099,2.3441308683503,0.121360521749513,1.5602073798847,0.852408440419239,0.95497793895076,0.890894042497916,1.84296421259539,0.994147647766298,0.844016498463076,0.890469640183247,0.659215496907038,0.211125408127993,1.79323189425963,1.65770349318689,0.755798243562828,1.22722419002586,2.58478091468246,0.311039587661807,0.988551862620595,3.75944466818779,4.60415133204185,2.66337195219721,4.7896618469388,0,0.969332746095218,0.834912883456661,1.99613798001194,0.520855522170466,0.262379999988587,0,2.61724931056649,2.2882828526349,0.236387681767936,0.344743373241465,0,0.694499979733169,0,1.5677537021303,4.5774520895125,1.21637185924347,1.77328571372128,1.09692698576986,0.32681539055697,0.557694977114413,1.23120413606075,0.797594390929008,0.69169171316418,0.628303510868405,1.4124158349861,2.23300811812344,0.915975934018623,2.13213910407454,0,3.29658538429552,2.99181027420282,1.1279783030859,0.392125068635479,1.34257269580674,0.569261198172555,1.58936578980379,0.843992258112108,0.652931232636591,0.848118428603645,0,2.98578579323551,2.56526937059684,1.83309043480088,0.889563386041866,0.741383633679017,0.730953646538188,1.28062152663286,1.60515529459758,0.234264445725339,2.18945747058799,2.15231080825299,2.91336455440911,0.394584402849391,2.41981432097328,1.53036380815245,3.47526187956684,0.300646838828985,0.518440956986236,0,0.661983911750998,0.313932918407225,0,0,1.66409607615766,1.38847790668105,0.979923974143776,0.69647365264322,1.22308667769421,1.20390222730132,0.774050650312681,1.60796497589608,1.31384731285135,1.84279131327997,0.706049013532002,1.80784592624426,2.19267079434801,1.58971689362392,0.696418755514666,0.586654148204409,0.721429382263803,1.06726497369676,0.999048047910651,0.144090417154106,0.229073192331831,1.02956998717179,1.1524383839052,0.49701014226173,0.942776138467182,0.951329442515298,1.67364554099733,1.32597682927218,2.02265412931063,1.20084057741958,0.958337652243951,6.38732940334862,1.71906176567983,0.525774708558629,1.11712960508902,0.687481272035051,0.717873024576814,0.798716001995964,2.57535628881943,1.78537165953498,1.5452198671947,0.360299883542404,0,1.6544468284517,1.89556474276683,1.41547442093788,0.78741985211799,0.592713324460491,0.795229689809303,1.63444087333891,0.964518890790115,0.825236619583403,0,2.4747128070665,4.6428117273477,0.850493793212345,1.0063040627978,1.49730843868477,1.20645552710496,2.21760706690754,0.896436696664224,2.1110671705139,0.714695326373367,1.98627591109629,0,1.62899880526114,0.864221491201268,0,2.39460383124975,0.738832686744051,0.681552087141687,0.679872549120754,1.61207457045891,3.97520666736664,0.904980694530854,0.52893040697076,0.684347351537318,1.40963004463334,3.20362237703084,0.628817220398664,3.31391244277756,4.96166021811951,1.38328142328561,1.82688897571344,0,0,0.7520696820681,0.306345576763462,1.31149052283922,1.88464915500281,0,0.732157589411779,1.3771002377715,0.573409195690071,1.77486482458964,1.55241007353459,0.138348634936231,0.249960815924213,0.454947352624943,0,1.6468607378872,0,0.144921028610825,0.597019211547496,0.467426619694449,0,0,0.251567901752575,0,0.457680136793847,0.302461847526478,0.15543720058278,0.295710299979268,0,2.69881867298163,0,0.414706207840855,0.265841714557995,1.5652351854352,0.901545653983311,0.380805212168795,0.406870733204662,0.363697318405119,0.537052785212442,0.464033759878494,0,0.400027764663154,0,1.34699795506368,0,0,0.428883182749851,3.13193150358254,0.680117776536817,1.85217979459067,0.489473409012935,0.895444205407437,1.54400723580486,1.53498834705095,0.883445729729405,1.54331230616732,1.01365464391844,0.76872455576384,1.38172136692479,0,0.414775308455192,0.194860308839388,0.398594520940089,0.327130788511688,0.655219697692825,1.2288645437686,1.05656061679314,0.59996218756479,3.52082707990665,1.37771983728653,1.13503190713367,0,0.139879507719444,1.24415452006595,0.127894371303652,1.83302179374359,0.314531883711793,0.327628914576042,0.169732529954025,0,0,0,0.318004350653419,5.67804564009024,0.80057074828547,1.41070377476274,0.918736432059601,0.963438376446893,0,1.11743701340006,0.41023272848151,0.756215088665154,0.622415272177961,1.13032951942296,0,1.27592034051333,0.353909170043221,0.183428598521679,1.03973099535304,1.52552838186867,0,0.795664888465099,2.55715116387475,1.0085253435176,1.56302802246618,1.83334686136996,0.163771917510097,1.33070477595341,0.607838261565552,0.781078098613847,0.620060389503552,1.26831620387814,0,2.19303106742873,0.496211178389294,0,0.638812138197976,3.21421101526972,0,3.64179362541979,1.36597314810779,1.86274977341542,0.806637912890455,1.02892805662451,0.747667062745149,0.526182188502793,1.18193840883968,0.556157009460346,2.19780659981439,0.785577949580009,5.32517110296199,2.73947616152849,0.863710364874486,0.47775168788705,1.07214816264985,0.316027223465453,0.348724276104376,0,1.60342272946051,0.207216164163037,0.51215543128185,0,0.430227358820278,0.946656005844523,1.19298766662821,1.69354820076372,4.1239236337929,0.31020638566432,0,1.23040974977572,0.687051635306701,0.609589624911347,1.29485767437579,1.84793052341245,0,0,0,1.39265542612958,0.237840181555137,0.67767649223376,0,1.50962843566674,1.31196068783506,1.09279780251979,6.58444214906132,1.71603825227734,0.471353094203252,1.37415926980462,2.0793248022896,1.6906229103336,0.849635573439084,2.81951753939561,3.28735228665244,0.599646935549574,0.71421575442263,1.76447435857846,2.00603416722921,2.19100916473955,1.37618785021362,1.00337708206016,0.473314686579554,0.883889372481891,1.30905207102113,3.1741610430924,0.371995018166751,1.38652688589425,0.865253124247578,0.126166424835079,0.437062287854782,0.126698501011437,0.917899467677836,1.60330443159336,1.19463369395298,2.005660314339,1.21245917149183,0.535928260312357,0,0.620597975171371,1.27940389140589,2.85677317756488,1.48554492622814,1.73809200028402,2.57903283935411,3.30965223046457,3.03175783437329,1.08858373948481,1.71116650542641,1.6164492723501,2.22338836717297,2.32862249582209,0.569822880276821,2.13454691755431,0,3.59300808426348,0,1.34465588601153,1.62758471326295,0.665756774185513,2.61655931668334,0 | |||
|short_description=p@chr10:104952377..104952445,+ | |||
}} |
Revision as of 04:46, 11 January 2014
Short description: | p@chr10:104952377..104952445, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:104952377..104952445, + |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.39e-42 | 168 |
hematopoietic oligopotent progenitor cell | 6.89e-40 | 161 |
hematopoietic multipotent progenitor cell | 6.89e-40 | 161 |
hematopoietic cell | 6.11e-38 | 177 |
leukocyte | 1.36e-37 | 136 |
myeloid cell | 4.96e-34 | 108 |
common myeloid progenitor | 4.96e-34 | 108 |
myeloid leukocyte | 7.82e-34 | 72 |
hematopoietic lineage restricted progenitor cell | 3.10e-31 | 120 |
nongranular leukocyte | 4.07e-31 | 115 |
classical monocyte | 1.27e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.27e-29 | 42 |
granulocyte monocyte progenitor cell | 1.30e-29 | 67 |
macrophage dendritic cell progenitor | 1.03e-26 | 61 |
defensive cell | 1.94e-26 | 48 |
phagocyte | 1.94e-26 | 48 |
myeloid lineage restricted progenitor cell | 2.68e-26 | 66 |
monopoietic cell | 7.06e-26 | 59 |
monocyte | 7.06e-26 | 59 |
monoblast | 7.06e-26 | 59 |
promonocyte | 7.06e-26 | 59 |
mesenchymal cell | 2.59e-09 | 354 |
connective tissue cell | 9.70e-09 | 361 |
intermediate monocyte | 3.26e-07 | 9 |
CD14-positive, CD16-positive monocyte | 3.26e-07 | 9 |
granulocyte | 4.44e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.52e-33 | 108 |
hematopoietic system | 4.86e-32 | 98 |
blood island | 4.86e-32 | 98 |
immune system | 4.79e-28 | 93 |
bone marrow | 1.36e-26 | 76 |
bone element | 2.17e-24 | 82 |
skeletal element | 2.26e-20 | 90 |
skeletal system | 5.34e-16 | 100 |
lateral plate mesoderm | 4.17e-15 | 203 |
connective tissue | 1.44e-07 | 371 |