FFCP PHASE1:Hg19::chr11:910796..910847,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=66005 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28474 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BWS9,E9PKF1,E9PI70 | |||
|association_with_transcript=0bp_to_ENST00000336845,ENST00000429789,ENST00000436108,ENST00000525225,ENST00000528581,ENST00000530939,uc010qwv.1_5end | |||
|coexpression_cluster_id=C887 | |||
|description=CAGE_peak_1_at_CHID1_5end | |||
|id=chr11:910796..910847,- | |||
|ontology_enrichment_celltype=CL:0000055!5.57e-30!180;CL:0000183!1.17e-17!59;CL:0000680!1.56e-15!57;CL:0000056!1.56e-15!57;CL:0000355!1.56e-15!57;CL:0000187!3.01e-15!54;CL:0000192!4.38e-15!42;CL:0000514!4.38e-15!42;CL:0000222!2.10e-14!119;CL:0000393!6.41e-14!60;CL:0000211!6.41e-14!60;CL:0000057!1.77e-13!75;CL:0000220!2.94e-13!246;CL:0002321!4.01e-13!248;CL:0000359!4.94e-12!32;CL:0000548!4.56e-11!679;CL:0000004!4.56e-11!679;CL:0000255!4.56e-11!679;CL:0000012!1.06e-10!682;CL:0002371!1.38e-10!591;CL:0000144!6.62e-10!625 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.27e-11;32!CL:0000192;1.73e-10;43!CL:0000187;2.83e-08;55!CL:0000134;3.12e-07;55!CL:0000393;7.44e-07;61!CL:0000211;7.44e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,3.61e-15,58;CL:0000056,3.61e-15,58;CL:0000355,3.61e-15,58;CL:0000187,7.15e-15,55;CL:0000192,1.26e-14,43;CL:0000514,1.26e-14,43;CL:0000222,1.91e-14,121;CL:0000057,7.32e-14,76;CL:0000393,1.33e-13,61;CL:0000211,1.33e-13,61;CL:0002321,3.17e-13,250;CL:0000359,4.94e-12,32 | |||
|ontology_enrichment_development_v019=CL:0000514;1.73e-10;43!CL:0000355;6.87e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.06e-16!83;UBERON:0002329!1.06e-16!83;UBERON:0003077!1.06e-16!83;UBERON:0003059!1.06e-16!83;UBERON:0007282!1.06e-16!83;UBERON:0009618!1.06e-16!83;UBERON:0007285!1.06e-16!83;UBERON:0005256!1.11e-16!143;UBERON:0004290!2.98e-16!70;UBERON:0000486!4.44e-16!82;UBERON:0001134!2.97e-14!61;UBERON:0002036!2.97e-14!61;UBERON:0003082!2.97e-14!61;UBERON:0002385!2.40e-13!63;UBERON:0001015!2.40e-13!63;UBERON:0000383!2.40e-13!63;UBERON:0002049!1.34e-12!79;UBERON:0007798!1.34e-12!79;UBERON:0000119!2.72e-12!312;UBERON:0000475!3.51e-12!365;UBERON:0000483!8.51e-12!309;UBERON:0003914!9.87e-12!118;UBERON:0001637!1.24e-11!42;UBERON:0003509!1.24e-11!42;UBERON:0004572!1.24e-11!42;UBERON:0004872!1.31e-11!84;UBERON:0002100!1.70e-11!216;UBERON:0000055!2.58e-11!69;UBERON:0001981!4.74e-11!60;UBERON:0007500!4.74e-11!60;UBERON:0004537!4.74e-11!60;UBERON:0006965!4.74e-11!60;UBERON:0000490!5.90e-11!138;UBERON:0000481!5.71e-10!347;UBERON:0003104!1.08e-09!238;UBERON:0009142!1.08e-09!238;UBERON:0004573!2.07e-09!33;UBERON:0004571!2.07e-09!33;UBERON:0003102!8.77e-09!95;UBERON:0004535!4.97e-08!110;UBERON:0001009!7.45e-08!113;UBERON:0002199!1.29e-07!45;UBERON:0002416!1.29e-07!45;UBERON:0000477!4.22e-07!286;UBERON:0000468!9.48e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.17e-08;33!UBERON:0004571;1.17e-08;33!UBERON:0001637;2.08e-08;42!UBERON:0003509;2.08e-08;42!UBERON:0004572;2.08e-08;42!UBERON:0003914;7.36e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,2.07e-18,78;UBERON:0007524,3.86e-16,73;UBERON:0003104,4.99e-16,160;UBERON:0009142,4.99e-16,160;UBERON:0002329,6.25e-16,71;UBERON:0003059,6.25e-16,71;UBERON:0007282,6.25e-16,71;UBERON:0004290,6.25e-16,71;UBERON:0009618,6.25e-16,71;UBERON:0000486,8.48e-16,83;UBERON:0003077,1.26e-15,72;UBERON:0007285,1.26e-15,72;UBERON:0001134,6.21e-14,62;UBERON:0002036,6.21e-14,62;UBERON:0003082,6.21e-14,62;UBERON:0005256,8.48e-14,122;UBERON:0000119,2.26e-13,309;UBERON:0002385,4.73e-13,64;UBERON:0001015,4.73e-13,64;UBERON:0000383,4.73e-13,64;UBERON:0000483,7.45e-13,306;UBERON:0000490,1.40e-12,148;UBERON:0002049,3.13e-12,78;UBERON:0007798,3.13e-12,78;UBERON:0003914,6.75e-12,117;UBERON:0001637,1.24e-11,42;UBERON:0003509,1.24e-11,42;UBERON:0004572,1.24e-11,42;UBERON:0004872,2.94e-11,83;UBERON:0000055,5.95e-11,68;UBERON:0007500,1.12e-10,59;UBERON:0001981,1.12e-10,59;UBERON:0004537,1.12e-10,59;UBERON:0006965,1.12e-10,59;UBERON:0002100,1.70e-10,199;UBERON:0004573,2.07e-09,33;UBERON:0004571,2.07e-09,33;UBERON:0003102,1.34e-08,99;UBERON:0002199,5.44e-08,46;UBERON:0002416,5.44e-08,46;UBERON:0004535,9.39e-08,109;UBERON:0001009,1.39e-07,112 | |||
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| |||
|short_description=p1@CHID1 | |||
}} |
Revision as of 05:54, 11 January 2014
Short description: | p1@CHID1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CHID1_5end |
Coexpression cluster: | C887_Mesenchymal_Alveolar_Smooth_Renal_Fibroblast_leiomyoma_Preadipocyte |
Association with transcript: | 0bp_to_ENST00000336845, ENST00000429789, ENST00000436108, ENST00000525225, ENST00000528581, ENST00000530939, uc010qwv.1_5end |
EntrezGene: | CHID1 |
HGNC: | 28474 |
UniProt: | Q9BWS9E9PKF1E9PI70 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 3.61e-15 | 58 |
myoblast | 3.61e-15 | 58 |
multi-potent skeletal muscle stem cell | 3.61e-15 | 58 |
muscle cell | 7.15e-15 | 55 |
smooth muscle cell | 1.26e-14 | 43 |
smooth muscle myoblast | 1.26e-14 | 43 |
mesodermal cell | 1.91e-14 | 121 |
fibroblast | 7.32e-14 | 76 |
electrically responsive cell | 1.33e-13 | 61 |
electrically active cell | 1.33e-13 | 61 |
embryonic cell | 3.17e-13 | 250 |
vascular associated smooth muscle cell | 4.94e-12 | 32 |