FFCP PHASE1:Hg19::chr11:13984340..13984349,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10418 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=11252 | |||
|TSSclassifier=strong | |||
|UniProt=Q9HCB6 | |||
|association_with_transcript=156bp_to_ENST00000533633,NM_006108_5end | |||
|description=CAGE_peak_5_at_SPON1_5end | |||
|id=chr11:13984340..13984349,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000136;6.36e-13;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.98e-11,15 | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.54e-11;4!UBERON:0007284;1.54e-11;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.15e-53!115;UBERON:0001049!2.05e-32!57;UBERON:0005068!2.05e-32!57;UBERON:0006241!2.05e-32!57;UBERON:0007135!2.05e-32!57;UBERON:0001017!1.01e-28!82;UBERON:0003075!2.33e-28!86;UBERON:0007284!2.33e-28!86;UBERON:0005743!4.01e-28!86;UBERON:0002616!3.43e-27!59;UBERON:0002780!2.24e-26!41;UBERON:0001890!2.24e-26!41;UBERON:0006240!2.24e-26!41;UBERON:0002346!2.36e-26!90;UBERON:0000955!2.99e-26!69;UBERON:0006238!2.99e-26!69;UBERON:0003080!1.68e-25!42;UBERON:0000073!6.03e-25!94;UBERON:0001016!6.03e-25!94;UBERON:0001893!2.23e-21!34;UBERON:0002020!3.76e-21!34;UBERON:0003528!3.76e-21!34;UBERON:0002791!1.86e-20!33;UBERON:0001869!3.08e-19!32;UBERON:0003056!7.24e-18!61;UBERON:0000033!5.48e-17!123;UBERON:0002619!1.68e-16!22;UBERON:0000153!1.89e-16!129;UBERON:0007811!1.89e-16!129;UBERON:0004121!2.29e-15!169;UBERON:0000924!1.35e-14!173;UBERON:0006601!1.35e-14!173;UBERON:0001950!4.03e-14!20;UBERON:0000956!6.45e-14!25;UBERON:0000203!6.45e-14!25;UBERON:0000481!1.94e-11!347;UBERON:0000064!2.62e-11!219;UBERON:0000025!4.72e-10!194;UBERON:0000062!5.67e-10!511;UBERON:0004111!9.76e-10!241;UBERON:0000477!1.28e-09!286;UBERON:0000475!1.92e-09!365;UBERON:0002420!2.36e-09!9;UBERON:0007245!2.36e-09!9;UBERON:0010009!2.36e-09!9;UBERON:0010011!2.36e-09!9;UBERON:0000454!2.36e-09!9;UBERON:0000922!4.39e-09!612;UBERON:0002308!5.11e-09!9;UBERON:0000125!5.11e-09!9;UBERON:0000468!3.64e-08!659;UBERON:0003076!4.64e-08!15;UBERON:0003057!4.64e-08!15;UBERON:0000349!1.09e-07!5;UBERON:0001871!1.12e-07!7;UBERON:0002050!2.44e-07!605;UBERON:0005423!2.44e-07!605;UBERON:0000483!2.66e-07!309;UBERON:0000200!2.85e-07!6;UBERON:0009663!4.56e-07!7;UBERON:0000119!4.69e-07!312;UBERON:0002298!6.00e-07!8;UBERON:0000923!6.06e-07!604;UBERON:0005291!6.06e-07!604;UBERON:0006598!6.06e-07!604;UBERON:0002532!6.06e-07!604;UBERON:0000467!6.73e-07!625;UBERON:0000480!7.79e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;3.24e-15;3!UBERON:0000946;3.24e-15;3!UBERON:0002133;7.32e-11;2!UBERON:0007023;6.28e-08;114!UBERON:0010313;6.89e-08;10!UBERON:0004151;1.63e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.55e-20,114;UBERON:0003978,4.70e-15,3;UBERON:0009751,4.70e-15,3;UBERON:0000946,4.70e-15,3;UBERON:0002523,4.70e-15,3;UBERON:0005983,4.70e-15,3;UBERON:0002165,4.70e-15,3;UBERON:0002062,4.70e-15,3;UBERON:0007280,4.70e-15,3;UBERON:0002133,1.39e-10,2;UBERON:0010313,9.26e-08,10;UBERON:0002342,9.26e-08,10;UBERON:0005062,9.26e-08,10;UBERON:0004151,1.81e-07,3;UBERON:0004145,2.41e-07,3 | |||
|phase1_expression=0,0.428201047781966,1.26858963686374,0,0.446961094427288,0,0,0,2.61185628199839,0,0,0,0,0,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0.973269740605272,0,0,0.087834785693126,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622422070799533,0,0,0,0,0,0,0,0.298897361103602,0.117434498643765,0,0,0,0,1.34323515528495,0,0.494533858557114,0,0,0,0,0,0,0,0.901428353439581,0,0,0,0,0,0,0,0,0.337552664482532,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.232387885739037,0.414644220061482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0.384417447767103,0,0.160853921143607,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46508179271894,0,0,0,0,0,0,0.994147647766298,0.844016498463076,0,0,0,1.19548792950642,0,0,0,0,0,0,0,0,1.28236427328014,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0,0,0,0,0,0,1.77148277162768,0.964771509003264,0,0.331737779793674,0.591095237907095,0.658156191461918,0,0,1.07730361905316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0.424059214301822,0,2.98578579323551,1.23840590304675,0,0,0,0,1.34802265961354,2.40773294189637,0.468528891450678,0,0,0,0,2.41981432097328,0,0.568679216656392,0.150323419414493,0.103688191397247,0,0,0,0,0.284609546029793,0,0.173559738335131,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,2.03382666702479,0,0,0.50648636764703,0,0,3.62870091056899,0,0.576361668616424,0,0,0,0,0,0,0,0,0,0,0.547621515567972,0,0,0,1.11712960508902,1.3749625440701,2.15361907373044,0,0,0,0.940568614814168,0,0,0,0,0,0,0,2.38568906942791,0.953423842781029,0,0.137539436597234,0,0,0,0.668245123238271,0,0.315222829196793,0.577000469484979,0,0,0,0.714695326373367,1.32418394073086,0,0,0,0,0,0.164185041498678,0,0,0,0,1.0342636508924,0.26446520348538,0,0,0.961086713109252,0.157204305099666,1.65695622138878,0.992332043623902,0,0,0,2.1760712134779,1.7548292581589,1.22538230705385,1.63936315354902,0,0.886068179966986,0.976210119215705,0.3755727921195,0.573409195690071,0.332787154610557,0.558867626472451,0.553394539744923,0,0,0,0,0,0,0,0.701139929541673,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0.834979926253974,0,0.159633859057151,0.615349092722265,0.756215088665154,0.691572524642179,1.13032951942296,0,0,0,0,0,0,0,0,0.82731361184183,0,1.56302802246618,0,0,0,0.540300676947157,0,0.413373593002368,0.570742291745161,0,1.09651553371436,0.496211178389294,0,0,0.535701835878287,0.336283722218824,1.21393120847326,0,0,0,0,0.271878931907327,0.460409414939944,0,0,0.941917114206168,0.942693539496011,0.280272163313789,0.913158720509496,0,0,1.00067161847319,0.47404083519818,0,0,0,0,0,0,0,0,0,0.423387050190929,0.4582137370881,0,0,0.447421727191169,0,0,0,0,2.3196288626764,3.88568794447312,0,0,0,0,0.549702583727146,0.150962843566674,1.08043821351123,0.874238242015829,0,1.47088993052343,0,1.37415926980462,0,0.8453114551668,0,0.187967835959707,0.257831551894309,0,0,0,0,2.92134555298607,0,0.573358332605805,0,0.543931921527318,0,0,0,0.924351257262837,0,0,0,0,0,0.26721740526556,0,0.250707539292375,0,0,0.829169439458779,0.620597975171371,0,1.66645102024618,0,0,0,0.381882949668989,0.404234377916439,0,0.684466602170562,0.0673520530145875,0.143444410785353,1.99596213927608,0,0,0,0,0,0.733448665097199,1.22068853494722,1.33151354837103,0.201273793591026,0 | |||
|short_description=p5@SPON1 | |||
}} |
Revision as of 06:42, 11 January 2014
Short description: | p5@SPON1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SPON1_5end |
Coexpression cluster: | NA |
Association with transcript: | 156bp_to_ENST00000533633, NM_006108_5end |
EntrezGene: | SPON1 |
HGNC: | 11252 |
UniProt: | Q9HCB6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.98e-11 | 15 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.55e-20 | 114 |
valve | 4.70e-15 | 3 |
cardiac mesenchyme | 4.70e-15 | 3 |
cardial valve | 4.70e-15 | 3 |
tunica intima | 4.70e-15 | 3 |
heart layer | 4.70e-15 | 3 |
endocardium | 4.70e-15 | 3 |
endocardial cushion | 4.70e-15 | 3 |
presumptive endocardium | 4.70e-15 | 3 |
atrioventricular valve | 1.39e-10 | 2 |
neural crest-derived structure | 9.26e-08 | 10 |
neural crest | 9.26e-08 | 10 |
neural fold | 9.26e-08 | 10 |
cardiac chamber | 1.81e-07 | 3 |
outflow tract | 2.41e-07 | 3 |