FFCP PHASE1:Hg19::chr11:112035029..112035045,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3606 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5986 | |||
|TSSclassifier=not | |||
|UniProt=Q14116,Q6WWJ7 | |||
|association_with_transcript=-189bp_to_ENST00000280357,NM_001243211,NM_001562,uc001pnb.1,uc009yym.1_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_7_at_IL18_5end | |||
|id=chr11:112035029..112035045,- | |||
|ontology_enrichment_celltype=CL:0002057!4.10e-65!42;CL:0000860!1.68e-60!45;CL:0002194!1.67e-45!63;CL:0000576!1.67e-45!63;CL:0000040!1.67e-45!63;CL:0000559!1.67e-45!63;CL:0002009!5.39e-44!65;CL:0000839!1.35e-40!70;CL:0000557!5.69e-40!71;CL:0000766!4.27e-37!76;CL:0002087!5.94e-27!119;CL:0000763!6.81e-24!112;CL:0000049!6.81e-24!112;CL:0000738!3.01e-22!140;CL:0002031!3.52e-21!124;CL:0000037!2.88e-17!172;CL:0000566!2.88e-17!172;CL:0000988!4.56e-16!182;CL:0002032!7.31e-15!165;CL:0000837!7.31e-15!165;CL:0000842!1.86e-09!3;CL:0000224!2.67e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.89e-54;33!CL:0002057;1.89e-54;33!CL:0000473;4.75e-39;39!CL:0000234;4.75e-39;39!CL:0000576;4.36e-30;48!CL:0000766;3.04e-25;69!CL:0002087;1.31e-14;104!CL:0000763;5.04e-13;100!CL:0002393;3.19e-10;6!CL:0002397;3.19e-10;6!CL:0000738;5.30e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.47e-64,42;CL:0002057,1.47e-64,42;CL:0000473,2.29e-56,48;CL:0000234,2.29e-56,48;CL:0002194,6.85e-45,59;CL:0000576,6.85e-45,59;CL:0000040,6.85e-45,59;CL:0000559,6.85e-45,59;CL:0002009,2.08e-43,61;CL:0000839,4.32e-40,66;CL:0000557,1.74e-39,67;CL:0000766,1.05e-36,72;CL:0000763,3.32e-24,108;CL:0000049,3.32e-24,108;CL:0002087,1.13e-22,115;CL:0002031,1.10e-21,120;CL:0000738,5.24e-19,136;CL:0002032,7.09e-16,161;CL:0000837,7.09e-16,161;CL:0000037,3.65e-15,168;CL:0000988,2.49e-14,177;CL:0002393,4.28e-07,9;CL:0002397,4.28e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.56e-43;42!CL:0000049;4.38e-07;108 | |||
|ontology_enrichment_disease=DOID:3112!1.44e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.21e-35!102;UBERON:0003061!4.21e-35!102;UBERON:0002371!4.74e-35!80;UBERON:0002193!2.41e-34!112;UBERON:0001474!2.46e-32!86;UBERON:0002405!5.77e-28!115;UBERON:0004765!6.10e-27!101;UBERON:0001434!6.10e-27!101;UBERON:0002204!1.24e-14!167;UBERON:0003081!3.76e-14!216;UBERON:0000926!7.67e-08!448;UBERON:0004120!7.67e-08!448;UBERON:0006603!7.67e-08!448;UBERON:0000997!1.64e-07!1;UBERON:0005056!1.64e-07!1;UBERON:0002372!1.87e-07!1;UBERON:0001961!1.87e-07!1;UBERON:0001744!1.87e-07!1;UBERON:0001735!1.87e-07!1;UBERON:0002363!1.99e-07!1;UBERON:0007647!1.99e-07!1;UBERON:0010115!1.99e-07!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.63e-35,76;UBERON:0001474,3.76e-32,82;UBERON:0004765,3.18e-29,90;UBERON:0002405,2.96e-28,93;UBERON:0002390,9.06e-27,98;UBERON:0003061,9.06e-27,98;UBERON:0001434,3.24e-26,100;UBERON:0002193,3.32e-24,108;UBERON:0002204,2.91e-15,167;UBERON:0003081,2.49e-12,203;UBERON:0000926,1.94e-07,315;UBERON:0004120,1.94e-07,315;UBERON:0006603,1.94e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60435557976113,1.08505435357926,0,0,0,0,0,0,0.929716147622738,0.411167888021826,0.619412741790207,0,0.256160706529101,0,16.8925383560943,3.87290810150296,6.77132432971709,0.564727018627814,0,0,10.1007684482398,5.77672248736969,12.7867425159808,0,0,0,8.41606792022894,1.70215567407342,3.73693349397345,0,0,0.217188844705117,4.84319602106695,6.62899744777616,11.076183560431,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337169380156203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@IL18 | |||
}} |
Revision as of 10:21, 11 January 2014
Short description: | p7@IL18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_IL18_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -189bp_to_ENST00000280357, NM_001243211, NM_001562, uc001pnb.1, uc009yym.1_5end |
EntrezGene: | IL18 |
HGNC: | 5986 |
UniProt: | Q14116Q6WWJ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.47e-64 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.47e-64 | 42 |
defensive cell | 2.29e-56 | 48 |
phagocyte | 2.29e-56 | 48 |
monopoietic cell | 6.85e-45 | 59 |
monocyte | 6.85e-45 | 59 |
monoblast | 6.85e-45 | 59 |
promonocyte | 6.85e-45 | 59 |
macrophage dendritic cell progenitor | 2.08e-43 | 61 |
myeloid lineage restricted progenitor cell | 4.32e-40 | 66 |
granulocyte monocyte progenitor cell | 1.74e-39 | 67 |
myeloid leukocyte | 1.05e-36 | 72 |
myeloid cell | 3.32e-24 | 108 |
common myeloid progenitor | 3.32e-24 | 108 |
nongranular leukocyte | 1.13e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 1.10e-21 | 120 |
leukocyte | 5.24e-19 | 136 |
hematopoietic oligopotent progenitor cell | 7.09e-16 | 161 |
hematopoietic multipotent progenitor cell | 7.09e-16 | 161 |
hematopoietic stem cell | 3.65e-15 | 168 |
hematopoietic cell | 2.49e-14 | 177 |
intermediate monocyte | 4.28e-07 | 9 |
CD14-positive, CD16-positive monocyte | 4.28e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.63e-35 | 76 |
bone element | 3.76e-32 | 82 |
skeletal element | 3.18e-29 | 90 |
immune system | 2.96e-28 | 93 |
hematopoietic system | 9.06e-27 | 98 |
blood island | 9.06e-27 | 98 |
skeletal system | 3.24e-26 | 100 |
hemolymphoid system | 3.32e-24 | 108 |
musculoskeletal system | 2.91e-15 | 167 |
lateral plate mesoderm | 2.49e-12 | 203 |
mesoderm | 1.94e-07 | 315 |
mesoderm-derived structure | 1.94e-07 | 315 |
presumptive mesoderm | 1.94e-07 | 315 |