FFCP PHASE1:Hg19::chr11:121322360..121322393,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C103 | |||
|description=CAGE_peak_at_chr11:121322360..121322393,+ | |||
|id=chr11:121322360..121322393,+ | |||
|ontology_enrichment_celltype=CL:0000838!3.10e-21!52;CL:0000542!1.41e-20!53;CL:0000051!1.41e-20!53;CL:0000791!3.93e-19!18;CL:0000789!3.93e-19!18;CL:0002420!3.93e-19!18;CL:0002419!3.93e-19!18;CL:0000790!3.93e-19!18;CL:0000625!1.06e-13!11;CL:0000084!1.86e-13!25;CL:0000827!1.86e-13!25;CL:0000738!5.12e-13!140;CL:0002087!5.06e-12!119;CL:0002031!8.84e-09!124;CL:0000624!1.38e-08!6;CL:0000037!1.81e-07!172;CL:0000566!1.81e-07!172;CL:0000945!6.30e-07!24;CL:0000826!6.30e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000791;4.83e-40;18!CL:0000789;4.83e-40;18!CL:0002419;4.83e-40;18!CL:0000084;1.39e-30;25!CL:0000625;1.18e-27;11!CL:0000624;1.24e-16;6!CL:0000542;3.21e-14;53!CL:0000898;3.76e-09;3!CL:0000226;1.26e-08;3!CL:0000842;1.26e-08;3!CL:0000623;2.07e-08;3!CL:0000815;7.16e-07;2!CL:0000792;7.16e-07;2!CL:0002677;7.16e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.99e-40,18;CL:0000789,4.99e-40,18;CL:0002420,4.99e-40,18;CL:0002419,4.99e-40,18;CL:0000790,4.99e-40,18;CL:0000084,1.77e-30,25;CL:0000827,1.77e-30,25;CL:0000625,1.24e-27,11;CL:0000838,1.44e-24,52;CL:0000542,5.73e-24,53;CL:0000051,5.73e-24,53;CL:0000624,1.23e-16,6;CL:0002087,9.22e-13,115;CL:0000738,2.13e-10,136;CL:0000898,3.62e-09,3;CL:0002031,5.15e-09,120;CL:0000226,1.17e-08,3;CL:0000842,1.17e-08,3;CL:0000623,1.95e-08,3;CL:0000825,1.95e-08,3;CL:0000037,5.58e-07,168;CL:0000815,7.17e-07,2;CL:0000792,7.17e-07,2;CL:0002677,7.17e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;4.83e-40;18!CL:0000051;3.21e-14;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.16e-10!115;UBERON:0000178!2.78e-08!15;UBERON:0000179!2.78e-08!15;UBERON:0000463!2.78e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.95e-18;15!UBERON:0000179;8.95e-18;15!UBERON:0000463;8.95e-18;15!UBERON:0006947;8.78e-08;3!UBERON:0004054;8.78e-08;3!UBERON:0002390;5.39e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,7.69e-18,15;UBERON:0000179,7.69e-18,15;UBERON:0000463,7.69e-18,15;UBERON:0006947,1.29e-07,3;UBERON:0004054,1.29e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993374274723366,0.410502947249729,0.314843125254717,0.786728553697808,0.383829398097213,0.619264493264304,0,0.30120591877825,0,1.62681121218633,0.284338464974843,0,1.10799081706375,1.40381113229099,0.868043482863407,0.223915474239924,1.29557466407592,0.257575567634187,0,0,0,0,0,0.309706370895104,0.575384784644301,0,0.47296445977717,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0.521482918420201,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0.400395987036012,0.574752439954483,0,0.954053754535364,1.70763890732835,0,1.91136614062614,0,0,0,14.7532327585375,9.03924754323079,10.485676448975,11.5358681819568,26.3997035973208,27.4599727326145,31.1722765452658,5.34770193048833,32.7012557297069,29.4640079796216,31.9548559242718,2.17755243533648,2.86130564631732,3.12432018746985,2.21080014228679,2.60822777161547,14.828656316206,17.3901538258314,11.4989076185474,2.94604291013672,4.98186641682498,6.18529401868734,9.1087089127021,6.68987370080603,7.81300144627702,8.55406840003537,4.81840381048873,8.31912972503719,8.74515085866421,8.99753557767264,5.74789597844733,5.24177532384304,3.20928234940209,7.53086900190555,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.130979075497713,0.728590576585084,0,0.324547393654683,0,0,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,2.33678033231916,0,0.219500570817251,0,0,0.370353780634118,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.3346767244424,4.09692392233083,3.85029108839245,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.23688091430106,6.03999762292127,3.94891963872744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0.601519410909855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0.192190067365106,0.382838137483752,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48111056362756,0.670302275535787,0,0.376575203107117,0.43050537267123,0,0.443430153536676,0.918893600827838,1.52234282769651,2.29391162142713,2.27858874869665,3.81170840732462,1.64544909234478,3.24236655596359,3.7802200606668,3.17250070517708,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12284324244932,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,1.10513566212459,0,0,0.615424027305347,0,0.0898683511473268,0,0,1.67693789582787,0,0,0,0,0,0,0,0.724999575434793,0.796554137998498,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0.615602068030377,0,0,0,0,0.638002319463839,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0.489698424477443,0.424059214301822,0,0.995261931078505,3.80367527364358,21.9970852176105,0,0,0,0.067401132980677,0,0,1.45963831372533,0,0,3.15667522279512,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0.520679215005393,0,0,2.09672001890436,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0.0633107959558787,0.782205530939212,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05154941711726,0,0,0,0.399358000997982,0,0,0,0,0,0.630265458457789,0.494495150286999,0.606631894687664,0,0.0846733320657845,0,0,0,0,0,0,0,0.0607495566580247,1.34173875039706,0.630445658393585,1.15400093896996,0,0,0,0,0,0,0,0,0,0,0,0,0,0.58620893471233,1.32506888912221,0.129282956361551,0.13223260174269,0,0,0.213574825135389,0.314408610199332,0.828478110694391,6.94632430536731,0,0.852548188666271,0,0,0,0,0,5.81100156125867,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.138314504928436,0,0,0,0.589848616738702,0.183428598521679,0,0,0,0,0.225630985047772,0,0,0,0,0.591424344868181,0,0,0,0,0,0,0,0,1.27762427639595,0,0,0,0.227662191351298,0.177404740325278,0.576169937778896,0,0.0679697329768317,0.131545547125698,0,1.66847102838104,2.35479278551542,0,1.12108865325516,1.82631744101899,0,0.9555033757741,0.142953088353313,0,0,0,0,0,0,0,0,0,0,1.27016115057279,0.22910686854405,0,0,0.447421727191169,3.63155864376399,0.243835849964539,0,0,0,0,3.27515248846948,0.198950775161368,0,0.5647304101948,0,1.50962843566674,2.77826969188601,0.218559560503957,0.470317296361523,0.490296643507811,0,0,0,0,0,0.469919589899268,0.386747327841463,0,0,0,0,0,0,0,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0.103432995861895,0.426467963801962,0,0.258355639344024,0.931120714437869,0,0.12729431655633,0.606351566874658,0,0,2.6940821205835,0.932388670104793,0.332660356546013,0.0814032686109745,0,0,1.97615444634491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| |||
|short_description=p@chr11:121322360..121322393,+ | |||
}} |
Revision as of 10:51, 11 January 2014
Short description: | p@chr11:121322360..121322393, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:121322360..121322393, + |
Coexpression cluster: | C103_CD4_CD8_Natural_Peripheral_Whole_Neutrophils_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.99e-40 | 18 |
alpha-beta T cell | 4.99e-40 | 18 |
immature T cell | 4.99e-40 | 18 |
mature T cell | 4.99e-40 | 18 |
immature alpha-beta T cell | 4.99e-40 | 18 |
T cell | 1.77e-30 | 25 |
pro-T cell | 1.77e-30 | 25 |
CD8-positive, alpha-beta T cell | 1.24e-27 | 11 |
lymphoid lineage restricted progenitor cell | 1.44e-24 | 52 |
lymphocyte | 5.73e-24 | 53 |
common lymphoid progenitor | 5.73e-24 | 53 |
CD4-positive, alpha-beta T cell | 1.23e-16 | 6 |
nongranular leukocyte | 9.22e-13 | 115 |
leukocyte | 2.13e-10 | 136 |
naive T cell | 3.62e-09 | 3 |
hematopoietic lineage restricted progenitor cell | 5.15e-09 | 120 |
single nucleate cell | 1.17e-08 | 3 |
mononuclear cell | 1.17e-08 | 3 |
natural killer cell | 1.95e-08 | 3 |
pro-NK cell | 1.95e-08 | 3 |
hematopoietic stem cell | 5.58e-07 | 168 |
regulatory T cell | 7.17e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 7.17e-07 | 2 |
naive regulatory T cell | 7.17e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 7.69e-18 | 15 |
haemolymphatic fluid | 7.69e-18 | 15 |
organism substance | 7.69e-18 | 15 |
male genital duct | 1.29e-07 | 3 |
internal male genitalia | 1.29e-07 | 3 |