FFCP PHASE1:Hg19::chr11:123525289..123525341,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55800 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20665 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NY72 | |||
|association_with_transcript=0bp_to_ENST00000299333,ENST00000392770,ENST00000530277,NM_001040151,NM_018400,uc001pza.1,uc001pzb.1_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_1_at_SCN3B_5end | |||
|id=chr11:123525289..123525341,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.76e-17;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.75e-43!115;UBERON:0001049!3.24e-37!57;UBERON:0005068!3.24e-37!57;UBERON:0006241!3.24e-37!57;UBERON:0007135!3.24e-37!57;UBERON:0000073!1.76e-36!94;UBERON:0001016!1.76e-36!94;UBERON:0005743!2.59e-36!86;UBERON:0001017!8.27e-35!82;UBERON:0002346!6.91e-33!90;UBERON:0003075!3.27e-32!86;UBERON:0007284!3.27e-32!86;UBERON:0002616!6.01e-30!59;UBERON:0003080!6.38e-30!42;UBERON:0002780!2.48e-29!41;UBERON:0001890!2.48e-29!41;UBERON:0006240!2.48e-29!41;UBERON:0000955!9.79e-29!69;UBERON:0006238!9.79e-29!69;UBERON:0000924!1.61e-25!173;UBERON:0006601!1.61e-25!173;UBERON:0003056!3.56e-25!61;UBERON:0004121!1.13e-24!169;UBERON:0001893!2.28e-24!34;UBERON:0002020!2.32e-24!34;UBERON:0003528!2.32e-24!34;UBERON:0002791!1.50e-23!33;UBERON:0001869!2.37e-23!32;UBERON:0004111!3.51e-21!241;UBERON:0000033!8.92e-21!123;UBERON:0000153!1.03e-20!129;UBERON:0007811!1.03e-20!129;UBERON:0002619!7.84e-20!22;UBERON:0000025!3.08e-19!194;UBERON:0001950!3.29e-18!20;UBERON:0000956!3.71e-18!25;UBERON:0000203!3.71e-18!25;UBERON:0000477!4.81e-17!286;UBERON:0000483!2.95e-15!309;UBERON:0000064!3.01e-15!219;UBERON:0000119!1.25e-14!312;UBERON:0000468!3.71e-13!659;UBERON:0000922!1.02e-11!612;UBERON:0000481!1.47e-11!347;UBERON:0000467!3.19e-11!625;UBERON:0000480!4.49e-11!626;UBERON:0002050!5.82e-10!605;UBERON:0005423!5.82e-10!605;UBERON:0000923!1.17e-09!604;UBERON:0005291!1.17e-09!604;UBERON:0006598!1.17e-09!604;UBERON:0002532!1.17e-09!604;UBERON:0000475!2.20e-09!365;UBERON:0000062!2.29e-09!511;UBERON:0003076!1.80e-08!15;UBERON:0003057!1.80e-08!15;UBERON:0002420!6.05e-08!9;UBERON:0007245!6.05e-08!9;UBERON:0010009!6.05e-08!9;UBERON:0010011!6.05e-08!9;UBERON:0000454!6.05e-08!9;UBERON:0001871!7.13e-08!7;UBERON:0002308!1.21e-07!9;UBERON:0000125!1.21e-07!9;UBERON:0004732!3.59e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.46e-35;41!UBERON:0001890;1.46e-35;41!UBERON:0001869;9.24e-35;32!UBERON:0003528;1.79e-34;34!UBERON:0002020;1.79e-34;34!UBERON:0002619;2.02e-34;22!UBERON:0001893;2.51e-34;34!UBERON:0002791;3.26e-34;32!UBERON:0000073;4.24e-32;53!UBERON:0002616;4.24e-32;53!UBERON:0001950;1.71e-31;20!UBERON:0000956;2.00e-29;25!UBERON:0000203;2.00e-29;25!UBERON:0000955;4.19e-22;68!UBERON:0001017;1.35e-21;75!UBERON:0001016;1.86e-21;83!UBERON:0007023;4.87e-15;114!UBERON:0002420;5.73e-13;9!UBERON:0007245;5.73e-13;9!UBERON:0010009;5.73e-13;9!UBERON:0010011;5.73e-13;9!UBERON:0000454;5.73e-13;9!UBERON:0000125;1.92e-12;9!UBERON:0002308;1.92e-12;9!UBERON:0001871;1.47e-11;6!UBERON:0004732;1.99e-10;13!UBERON:0001894;3.40e-10;7!UBERON:0000200;4.62e-10;6!UBERON:0009663;5.12e-10;7!UBERON:0011216;7.32e-10;132!UBERON:0004733;1.49e-09;12!UBERON:0002028;1.49e-09;12!UBERON:0000922;2.75e-09;49!UBERON:0000349;5.77e-09;5!UBERON:0001872;1.01e-08;5!UBERON:0002021;1.14e-08;5!UBERON:0002298;3.32e-08;6!UBERON:0000369;3.90e-07;4!UBERON:0002435;3.90e-07;4!UBERON:0000204;3.90e-07;4!UBERON:0003296;9.96e-07;4!UBERON:0010133;9.96e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.53e-61,56;UBERON:0005068,2.53e-61,56;UBERON:0006241,2.53e-61,56;UBERON:0007135,2.53e-61,56;UBERON:0001016,2.90e-60,89;UBERON:0001017,5.41e-58,81;UBERON:0000073,9.74e-58,53;UBERON:0002616,9.74e-58,53;UBERON:0002780,1.63e-49,41;UBERON:0001890,1.63e-49,41;UBERON:0003080,1.63e-49,41;UBERON:0006240,1.63e-49,41;UBERON:0000955,3.35e-49,68;UBERON:0006238,3.35e-49,68;UBERON:0007023,8.00e-48,114;UBERON:0003075,1.84e-46,82;UBERON:0007284,1.84e-46,82;UBERON:0002346,4.82e-45,86;UBERON:0001893,1.42e-40,34;UBERON:0003528,1.46e-40,34;UBERON:0002020,1.46e-40,34;UBERON:0001869,9.89e-39,32;UBERON:0002791,4.71e-38,32;UBERON:0010371,5.05e-38,104;UBERON:0003056,9.59e-36,61;UBERON:0002619,2.13e-34,22;UBERON:0004121,8.26e-34,171;UBERON:0000924,8.26e-34,171;UBERON:0006601,8.26e-34,171;UBERON:0011216,2.43e-32,223;UBERON:0001950,1.80e-31,20;UBERON:0000956,2.09e-29,25;UBERON:0000203,2.09e-29,25;UBERON:0010314,4.61e-29,132;UBERON:0000025,5.16e-20,192;UBERON:0004111,6.11e-18,240;UBERON:0000483,1.76e-13,306;UBERON:0000119,4.04e-13,309;UBERON:0002420,5.13e-13,9;UBERON:0007245,5.13e-13,9;UBERON:0010009,5.13e-13,9;UBERON:0010011,5.13e-13,9;UBERON:0000454,5.13e-13,9;UBERON:0003076,8.74e-13,15;UBERON:0003057,8.74e-13,15;UBERON:0000125,1.76e-12,9;UBERON:0002308,1.76e-12,9;UBERON:0001871,1.53e-11,6;UBERON:0004732,1.67e-10,13;UBERON:0001894,3.51e-10,7;UBERON:0006222,3.51e-10,7;UBERON:0009663,4.59e-10,7;UBERON:0000200,4.68e-10,6;UBERON:0000922,5.17e-10,592;UBERON:0004733,1.33e-09,12;UBERON:0002028,1.33e-09,12;UBERON:0007277,1.33e-09,12;UBERON:0002050,2.47e-09,564;UBERON:0000923,3.51e-09,560;UBERON:0010316,3.51e-09,560;UBERON:0005291,3.51e-09,560;UBERON:0006598,3.51e-09,560;UBERON:0010317,3.51e-09,560;UBERON:0002532,3.51e-09,560;UBERON:0000349,5.75e-09,5;UBERON:0005423,5.87e-09,581;UBERON:0001872,1.02e-08,5;UBERON:0002021,1.15e-08,5;UBERON:0002298,3.02e-08,6;UBERON:0000369,3.85e-07,4;UBERON:0002435,3.85e-07,4;UBERON:0000204,3.85e-07,4;UBERON:0010082,3.85e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0.791300934685361,0.123766352960047,0,0,0,0.730310090387373,0.975865597581014,0.738726348460727,0,1.56727360739044,0.286235987131057,0,0.125542639594803,0,0.0821005894499457,0,0,0,0.154816123316076,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0.189069634328136,0.443458794925128,0.087834785693126,7.92423406761161,0,0.370784442784429,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0,0.208994966536811,0.775250277507987,1.77883131343355,1.67360306382335,3.62546385398232,0.760272105718513,6.58967555380058,0.735326160691737,0.81014194788176,0.17859945656816,0.22452937262617,0,1.53316637465883,0.949265659568129,1.28241220751285,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0.560677600142307,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0.179389635688862,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0.169560592310488,0.193260853163297,0.545492241181669,0.286804595389004,0.365921118388786,0.132529768321485,0.348581828608555,1.34759371519982,0.504641701751257,0,0,0.643240938192885,0,0,0,0.118306800039844,0.168584690078102,0,0.220587945464788,0,0,0,0.196221465125346,0,0.738155454624648,1.40241773803446,0.4115740113314,0,0,0,0.590789906681404,0,0.491953754172454,0,0.439001141634502,1.1240175325762,0,0.0925884451585296,0.325808305310325,0,0,0.579652024875384,0.117408694235822,0.577465791044295,0.462985512576611,1.90254152234598,0,0,0,0,0,0,0.671928512795438,0.141775097242386,0.179117045405697,0.290633938513962,0.383382679165211,0,0,0,0,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,1.27047312111232,22.1237751557957,11.5993321916654,25.9650211268241,8.93114252314428,0,0,0,0.12269149171914,0,0,0,0.356857977594324,0,0,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0.606255142892519,0,0.907170879989041,0,0,0.280660094433074,0.128139149255701,0,0,0,0,0,0,0,0,1.81289174387433,0.601519410909855,1.28913384510255,0.114814448164607,0,0.131124414959424,0,0.616122696835318,0,0,0.422206515571503,2.27466768141793,0.340187410553031,0.431831832204279,3.08454505380579,0,0,0.254876273045038,0,0.223874754722178,0,0,0.256450125116389,0.328014645699706,1.62689197332152,0.618246069886334,0.0915694648183434,0.330037999682352,0,0,0,0.096670718292122,0,0.15350367472613,0,0,0,0,0.623224249527161,1.15699440752685,1.15314040419064,0.382838137483752,2.023155617111,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0.243713489631284,0,0,0.424216295861138,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0.159426272728822,0,0,0.846694330895531,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,2.19762268907841,0,0,1.42068073403207,0.23874448473769,0,0.921482106297696,122.280160675255,59.0811548924153,0,0.494411622680279,0,0.597743964753209,1.10513566212459,7.80991518348256,0,0,0.622079175323615,0,0.537063524026827,0,0.789147245095469,0,0,52.3439682891418,47.0334257680586,121.764416780728,0,0,4.34999745260876,0,0,0.236387681767936,10.3423011972439,1.45802306691627,6.42412481253181,26.5722415744152,24.1192877250816,6.10326945268333,5.08664595683633,2.36438095162838,52.4331099197994,0.10893846351899,1.11538995422883,0.923403102045565,0.113942055847001,0.23056390438806,0.0897576444097721,0.869178975376065,0,0.183195186803725,3.19820865611181,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0.141353071433941,0,0.995261931078505,0.707660516026713,4.27721101453538,0,0,0.104421949505455,4.92028270758942,9.63093176758547,15.9299823093231,0,0,0,0.789168805698781,7.25944296291983,105.595102762519,1.51647791108371,2.1045278718029,1.24425829676697,0.664653872707185,0.330991955875499,0.313932918407225,1.19472429772959,0,0,0,0,0,3.66926003308263,0,0,0.0730893170861856,0,1.26085721434945,0,13.1068829652709,0.274083849293502,0,82.4939671305099,0,0,0.85381197895741,0.599428828746391,0,0,3.77508995296322,0.720273989940749,0,0,0,0,0,0.288950589901519,13.8096666403252,3.55953985119182,0,0,0,1.67569440763353,0.458320848023367,7.17873024576814,1.19807400299395,0.429226048136571,0.223171457441873,1.94832070211506,0,1.16495949527454,0.0787831823072236,0.0824158583811665,0,0.492137407573744,0,86.6800361892141,43.312683143481,0.321506296930038,0.412618309791701,0,0,0,102.241503855456,0,0.788057072991982,0.786818822024972,0,0,5.37362552494447,0.714695326373367,0.662091970365432,0,0.542999601753713,0,0.326587360109409,0,0,0.170388021785422,0.226624183040251,0,0,8.40339216350079,13.4877253777544,1.02652102730598,0,0.320362237703084,2.51526888159466,1.24271716604159,2.97699613087171,0,0,0,0.544017803369474,0.50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| |||
|short_description=p1@SCN3B | |||
}} |
Revision as of 10:59, 11 January 2014
Short description: | p1@SCN3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SCN3B_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000299333, ENST00000392770, ENST00000530277, NM_001040151, NM_018400, uc001pza.1, uc001pzb.1_5end |
EntrezGene: | SCN3B |
HGNC: | 20665 |
UniProt: | Q9NY72 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data